RNA–Protein interactions for RNA: ENST00000417512.1

SDCCAG3-205, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-205ENST00000417512 PRDM10Q9NQV6 1147 aa16.83■□□□□ 0.28
SDCCAG3-205ENST00000417512 ADAMTS7Q9UKP4 1686 aa16.83■□□□□ 0.28
SDCCAG3-205ENST00000417512 CLEC11AQ9Y240 323 aa16.83■□□□□ 0.28
SDCCAG3-205ENST00000417512 TMEM88BA6NKF7 163 aa16.82■□□□□ 0.28
SDCCAG3-205ENST00000417512 A1BGP04217 495 aa16.82■□□□□ 0.28
SDCCAG3-205ENST00000417512 SRGNP10124 158 aa16.82■□□□□ 0.28
SDCCAG3-205ENST00000417512 CTCFP49711 727 aaPredicted RBP16.82■□□□□ 0.28
SDCCAG3-205ENST00000417512 CNTNAP1P78357 1384 aa16.81■□□□□ 0.28
SDCCAG3-205ENST00000417512 EAPPQ56P03 285 aaPredicted RBP16.81■□□□□ 0.28
SDCCAG3-205ENST00000417512 FAM9BQ8IZU0 186 aa16.81■□□□□ 0.28
SDCCAG3-205ENST00000417512 FMNL2Q96PY5 1086 aa16.81■□□□□ 0.28
SDCCAG3-205ENST00000417512 TAF1DQ9H5J8 278 aaPredicted RBP16.81■□□□□ 0.28
SDCCAG3-205ENST00000417512 HEG1Q9ULI3 1381 aa16.8■□□□□ 0.28
SDCCAG3-205ENST00000417512 GNAT3A8MTJ3 354 aa16.8■□□□□ 0.28
SDCCAG3-205ENST00000417512 VEGFBP49765 207 aa16.8■□□□□ 0.28
SDCCAG3-205ENST00000417512 AMER1Q5JTC6 1135 aaPredicted RBP16.8■□□□□ 0.28
SDCCAG3-205ENST00000417512 IL17REQ8NFR9 667 aa16.8■□□□□ 0.28
SDCCAG3-205ENST00000417512 NRXN2Q9P2S2 1712 aa16.79■□□□□ 0.28
SDCCAG3-205ENST00000417512 PASKQ96RG2 1323 aa16.79■□□□□ 0.28
SDCCAG3-205ENST00000417512 NBPF5PQ86XG9 351 aaPredicted RBP16.79■□□□□ 0.28
SDCCAG3-205ENST00000417512 DZIP3Q86Y13 1208 aaKnown RBP16.79■□□□□ 0.28
SDCCAG3-205ENST00000417512 L3MBTL3Q96JM7 780 aaPredicted RBP16.79■□□□□ 0.28
SDCCAG3-205ENST00000417512 SCN11AQ9UI33 1791 aa16.79■□□□□ 0.28
SDCCAG3-205ENST00000417512 MRC1P22897 1456 aa16.79■□□□□ 0.28
SDCCAG3-205ENST00000417512 AFDNP55196 1824 aaKnown RBP16.78■□□□□ 0.28
SDCCAG3-205ENST00000417512 U2SURPO15042 1029 aaKnown RBP16.78■□□□□ 0.28
SDCCAG3-205ENST00000417512 CAMTA2O94983 1202 aa16.78■□□□□ 0.28
SDCCAG3-205ENST00000417512 CCDC93Q567U6 631 aa16.78■□□□□ 0.28
SDCCAG3-205ENST00000417512 GAS2L2Q8NHY3 880 aa16.78■□□□□ 0.28
SDCCAG3-205ENST00000417512 HACL1Q9UJ83 578 aa16.78■□□□□ 0.28
SDCCAG3-205ENST00000417512 ITGBL1O95965 494 aaPredicted RBP16.77■□□□□ 0.28
SDCCAG3-205ENST00000417512 NPR1P16066 1061 aa16.77■□□□□ 0.28
SDCCAG3-205ENST00000417512 LBX1P52954 281 aa16.77■□□□□ 0.28
SDCCAG3-205ENST00000417512 DEFB115Q30KQ5 88 aa16.77■□□□□ 0.28
SDCCAG3-205ENST00000417512 PNMA8AQ86V59 439 aaPredicted RBP16.77■□□□□ 0.28
SDCCAG3-205ENST00000417512 BTBD11A6QL63 1104 aa16.76■□□□□ 0.27
SDCCAG3-205ENST00000417512 FKBP4Q02790 459 aaKnown RBP eCLIP16.76■□□□□ 0.27
SDCCAG3-205ENST00000417512 CC2D1BQ5T0F9 858 aaKnown RBP16.76■□□□□ 0.27
SDCCAG3-205ENST00000417512 CLEC4GQ6UXB4 293 aa16.76■□□□□ 0.27
SDCCAG3-205ENST00000417512 TPTE2Q6XPS3 522 aa16.76■□□□□ 0.27
SDCCAG3-205ENST00000417512 RTKN2Q8IZC4 609 aa16.76■□□□□ 0.27
SDCCAG3-205ENST00000417512 C7orf43Q8WVR3 580 aa16.76■□□□□ 0.27
SDCCAG3-205ENST00000417512 ZNF277Q9NRM2 450 aaPredicted RBP16.76■□□□□ 0.27
SDCCAG3-205ENST00000417512 WBP1LQ9NX94 342 aa16.76■□□□□ 0.27
SDCCAG3-205ENST00000417512 EPHX2P34913 555 aa16.75■□□□□ 0.27
SDCCAG3-205ENST00000417512 CNTROBQ8N137 903 aa16.75■□□□□ 0.27
SDCCAG3-205ENST00000417512 PNISRQ8TF01 805 aaKnown RBP16.75■□□□□ 0.27
SDCCAG3-205ENST00000417512 ZNF652Q9Y2D9 606 aa16.75■□□□□ 0.27
SDCCAG3-205ENST00000417512 TIAM2Q8IVF5 1701 aa16.75■□□□□ 0.27
SDCCAG3-205ENST00000417512 USP16Q9Y5T5 823 aa16.74■□□□□ 0.27
SDCCAG3-205ENST00000417512 DLEC1Q9Y238 1755 aa16.74■□□□□ 0.27
SDCCAG3-205ENST00000417512 GTF2E1P29083 439 aaPredicted RBP16.73■□□□□ 0.27
SDCCAG3-205ENST00000417512 ALDH1B1P30837 517 aa16.73■□□□□ 0.27
SDCCAG3-205ENST00000417512 PIP4K2AP48426 406 aaPredicted RBP16.73■□□□□ 0.27
SDCCAG3-205ENST00000417512 MAP2K1Q02750 393 aaPredicted RBP16.73■□□□□ 0.27
SDCCAG3-205ENST00000417512 CNGB1Q14028 1251 aaPredicted RBP16.73■□□□□ 0.27
SDCCAG3-205ENST00000417512 MAP1SQ66K74 1059 aaPredicted RBP16.73■□□□□ 0.27
SDCCAG3-205ENST00000417512 ABT1Q9ULW3 272 aaKnown RBP16.73■□□□□ 0.27
SDCCAG3-205ENST00000417512 FAM177BA6PVY3 158 aa16.72■□□□□ 0.27
SDCCAG3-205ENST00000417512 KCNQ3O43525 872 aa16.72■□□□□ 0.27
SDCCAG3-205ENST00000417512 SYNE4Q8N205 404 aa16.72■□□□□ 0.27
SDCCAG3-205ENST00000417512 JDP2Q8WYK2 163 aa16.72■□□□□ 0.27
SDCCAG3-205ENST00000417512 NIP7Q9Y221 180 aaKnown RBP eCLIP16.72■□□□□ 0.27
SDCCAG3-205ENST00000417512 ZNF541Q9H0D2 1346 aa16.71■□□□□ 0.27
SDCCAG3-205ENST00000417512 KLRG2A4D1S0 409 aaPredicted RBP16.71■□□□□ 0.27
SDCCAG3-205ENST00000417512 RASSF10A6NK89 507 aa16.71■□□□□ 0.27
SDCCAG3-205ENST00000417512 WDR43Q15061 677 aaKnown RBP eCLIP16.71■□□□□ 0.27
SDCCAG3-205ENST00000417512 CCDC184Q52MB2 194 aa16.71■□□□□ 0.27
SDCCAG3-205ENST00000417512 CCDC88AQ3V6T2 1871 aa16.71■□□□□ 0.27
SDCCAG3-205ENST00000417512 RNF123Q5XPI4 1314 aa16.7■□□□□ 0.26
SDCCAG3-205ENST00000417512 WDR33Q9C0J8 1336 aaKnown RBP16.7■□□□□ 0.26
SDCCAG3-205ENST00000417512 SNRPA1P09661 255 aaKnown RBP16.7■□□□□ 0.26
SDCCAG3-205ENST00000417512 IARSP41252 1262 aaKnown RBP16.7■□□□□ 0.26
SDCCAG3-205ENST00000417512 OLFM4Q6UX06 510 aa16.7■□□□□ 0.26
SDCCAG3-205ENST00000417512 GPC2Q8N158 579 aa16.7■□□□□ 0.26
SDCCAG3-205ENST00000417512 ABHD8Q96I13 439 aa16.7■□□□□ 0.26
SDCCAG3-205ENST00000417512 FZD9O00144 591 aa16.69■□□□□ 0.26
SDCCAG3-205ENST00000417512 EIF6P56537 245 aaKnown RBP16.69■□□□□ 0.26
SDCCAG3-205ENST00000417512 BEGAINQ9BUH8 593 aa16.69■□□□□ 0.26
SDCCAG3-205ENST00000417512 HSPA8P11142 646 aaKnown RBP16.68■□□□□ 0.26
SDCCAG3-205ENST00000417512 PPP2R1AP30153 589 aa16.68■□□□□ 0.26
SDCCAG3-205ENST00000417512 PAXIP1Q6ZW49 1069 aaPredicted RBP16.68■□□□□ 0.26
SDCCAG3-205ENST00000417512 NGEFQ8N5V2 710 aa16.68■□□□□ 0.26
SDCCAG3-205ENST00000417512 RTF1Q92541 710 aaKnown RBP16.68■□□□□ 0.26
SDCCAG3-205ENST00000417512 GJA3Q9Y6H8 435 aa16.68■□□□□ 0.26
SDCCAG3-205ENST00000417512 FER1L6Q2WGJ9 1857 aa16.67■□□□□ 0.26
SDCCAG3-205ENST00000417512 PRAMEF22A3QJZ6 481 aa16.67■□□□□ 0.26
SDCCAG3-205ENST00000417512 LMOD1P29536 600 aaPredicted RBP16.67■□□□□ 0.26
SDCCAG3-205ENST00000417512 PHACTR3Q96KR7 559 aa16.67■□□□□ 0.26
SDCCAG3-205ENST00000417512 ANKRD31Q8N7Z5 1873 aa16.67■□□□□ 0.26
SDCCAG3-205ENST00000417512 SLX4Q8IY92 1834 aa16.66■□□□□ 0.26
SDCCAG3-205ENST00000417512 GRM1Q13255 1194 aa16.66■□□□□ 0.26
SDCCAG3-205ENST00000417512 FAM161AQ3B820 660 aa16.66■□□□□ 0.26
SDCCAG3-205ENST00000417512 CFAP53Q96M91 514 aa16.66■□□□□ 0.26
SDCCAG3-205ENST00000417512 DDX21Q9NR30 783 aaKnown RBP eCLIP16.66■□□□□ 0.26
SDCCAG3-205ENST00000417512 CEMIPQ8WUJ3 1361 aa16.65■□□□□ 0.26
SDCCAG3-205ENST00000417512 CCDC85CA6NKD9 419 aa16.65■□□□□ 0.26
SDCCAG3-205ENST00000417512 RGL2O15211 777 aa16.65■□□□□ 0.26
SDCCAG3-205ENST00000417512 PRKAR2BP31323 418 aa16.65■□□□□ 0.26
SDCCAG3-205ENST00000417512 ECE1P42892 770 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms