RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 SETDB2Q96T68 719 aa18.69■□□□□ 0.58
SSB-204ENST00000417292 ZNF541Q9H0D2 1346 aa18.69■□□□□ 0.58
SSB-204ENST00000417292 IL6STP40189 918 aaPredicted RBP18.68■□□□□ 0.58
SSB-204ENST00000417292 SOGA3Q5TF21 947 aa18.68■□□□□ 0.58
SSB-204ENST00000417292 TIMELESSQ9UNS1 1208 aa18.68■□□□□ 0.58
SSB-204ENST00000417292 ADAMTSL1Q8N6G6 1762 aa18.68■□□□□ 0.58
SSB-204ENST00000417292 A1BGP04217 495 aa18.67■□□□□ 0.58
SSB-204ENST00000417292 HSPA5P11021 654 aaKnown RBP18.67■□□□□ 0.58
SSB-204ENST00000417292 ST5P78524 1137 aa18.67■□□□□ 0.58
SSB-204ENST00000417292 EAPPQ56P03 285 aaPredicted RBP18.67■□□□□ 0.58
SSB-204ENST00000417292 ZNF790Q6PG37 636 aa18.67■□□□□ 0.58
SSB-204ENST00000417292 ABHD8Q96I13 439 aa18.67■□□□□ 0.58
SSB-204ENST00000417292 KNSTRNQ9Y448 316 aa18.67■□□□□ 0.58
SSB-204ENST00000417292 NPHP1O15259 732 aa18.66■□□□□ 0.58
SSB-204ENST00000417292 HSPA8P11142 646 aaKnown RBP18.66■□□□□ 0.58
SSB-204ENST00000417292 FAM161AQ3B820 660 aa18.66■□□□□ 0.58
SSB-204ENST00000417292 AMER1Q5JTC6 1135 aaPredicted RBP18.66■□□□□ 0.58
SSB-204ENST00000417292 IL17REQ8NFR9 667 aa18.66■□□□□ 0.58
SSB-204ENST00000417292 TEX13AQ9BXU3 409 aaPredicted RBP18.66■□□□□ 0.58
SSB-204ENST00000417292 CLSPNQ9HAW4 1339 aa18.66■□□□□ 0.58
SSB-204ENST00000417292 RASSF10A6NK89 507 aa18.65■□□□□ 0.58
SSB-204ENST00000417292 EIF4G2P78344 907 aaKnown RBP eCLIP18.65■□□□□ 0.58
SSB-204ENST00000417292 CCDC93Q567U6 631 aa18.65■□□□□ 0.58
SSB-204ENST00000417292 OLFM4Q6UX06 510 aa18.65■□□□□ 0.58
SSB-204ENST00000417292 ZNF277Q9NRM2 450 aaPredicted RBP18.65■□□□□ 0.58
SSB-204ENST00000417292 HACL1Q9UJ83 578 aa18.65■□□□□ 0.58
SSB-204ENST00000417292 CLEC11AQ9Y240 323 aa18.65■□□□□ 0.58
SSB-204ENST00000417292 BCORQ6W2J9 1755 aa18.64■□□□□ 0.57
SSB-204ENST00000417292 EPHX2P34913 555 aa18.64■□□□□ 0.57
SSB-204ENST00000417292 DEFB115Q30KQ5 88 aa18.64■□□□□ 0.57
SSB-204ENST00000417292 MAP1SQ66K74 1059 aaPredicted RBP18.64■□□□□ 0.57
SSB-204ENST00000417292 SIPA1L3O60292 1781 aaPredicted RBP18.63■□□□□ 0.57
SSB-204ENST00000417292 FKBP4Q02790 459 aaKnown RBP eCLIP18.63■□□□□ 0.57
SSB-204ENST00000417292 CNTROBQ8N137 903 aa18.63■□□□□ 0.57
SSB-204ENST00000417292 RNF123Q5XPI4 1314 aa18.63■□□□□ 0.57
SSB-204ENST00000417292 DIAPH1O60610 1272 aaKnown RBP18.62■□□□□ 0.57
SSB-204ENST00000417292 TEFQ10587 303 aa18.62■□□□□ 0.57
SSB-204ENST00000417292 DZIP3Q86Y13 1208 aaKnown RBP18.62■□□□□ 0.57
SSB-204ENST00000417292 WDR33Q9C0J8 1336 aaKnown RBP18.62■□□□□ 0.57
SSB-204ENST00000417292 KLRG2A4D1S0 409 aaPredicted RBP18.61■□□□□ 0.57
SSB-204ENST00000417292 KCNQ3O43525 872 aa18.61■□□□□ 0.57
SSB-204ENST00000417292 NPR1P16066 1061 aa18.61■□□□□ 0.57
SSB-204ENST00000417292 PIP4K2AP48426 406 aaPredicted RBP18.61■□□□□ 0.57
SSB-204ENST00000417292 NBPF5PQ86XG9 351 aaPredicted RBP18.61■□□□□ 0.57
SSB-204ENST00000417292 FMNL2Q96PY5 1086 aa18.61■□□□□ 0.57
SSB-204ENST00000417292 GNAT3A8MTJ3 354 aa18.6■□□□□ 0.57
SSB-204ENST00000417292 FZD9O00144 591 aa18.6■□□□□ 0.57
SSB-204ENST00000417292 MAP2K1Q02750 393 aaPredicted RBP18.6■□□□□ 0.57
SSB-204ENST00000417292 NPM2Q86SE8 214 aaKnown RBP18.6■□□□□ 0.57
SSB-204ENST00000417292 PNMA8AQ86V59 439 aaPredicted RBP18.6■□□□□ 0.57
SSB-204ENST00000417292 ABT1Q9ULW3 272 aaKnown RBP18.59■□□□□ 0.57
SSB-204ENST00000417292 CLEC4GQ6UXB4 293 aa18.58■□□□□ 0.56
SSB-204ENST00000417292 USP16Q9Y5T5 823 aa18.58■□□□□ 0.56
SSB-204ENST00000417292 PRAMEF22A3QJZ6 481 aa18.57■□□□□ 0.56
SSB-204ENST00000417292 IARSP41252 1262 aaKnown RBP18.57■□□□□ 0.56
SSB-204ENST00000417292 FMR1Q06787 632 aaKnown RBP eCLIP18.57■□□□□ 0.567e-13■□□□□ 8.1
SSB-204ENST00000417292 RTKN2Q8IZC4 609 aa18.57■□□□□ 0.56
SSB-204ENST00000417292 GPC2Q8N158 579 aa18.57■□□□□ 0.56
SSB-204ENST00000417292 SYNE4Q8N205 404 aa18.57■□□□□ 0.56
SSB-204ENST00000417292 DDX21Q9NR30 783 aaKnown RBP eCLIP18.57■□□□□ 0.56
SSB-204ENST00000417292 SNED1Q8TER0 1413 aa18.57■□□□□ 0.56
SSB-204ENST00000417292 CEMIPQ8WUJ3 1361 aa18.56■□□□□ 0.56
SSB-204ENST00000417292 GAS2L2Q8NHY3 880 aa18.56■□□□□ 0.56
SSB-204ENST00000417292 COL3A1P02461 1466 aaPredicted RBP18.56■□□□□ 0.56
SSB-204ENST00000417292 THSD7BQ9C0I4 1608 aa18.56■□□□□ 0.56
SSB-204ENST00000417292 COL4A5P29400 1685 aa18.55■□□□□ 0.56
SSB-204ENST00000417292 TNRC18O15417 2968 aaPredicted RBP18.55■□□□□ 0.56
SSB-204ENST00000417292 LTBP1Q14766 1721 aa18.54■□□□□ 0.56
SSB-204ENST00000417292 CCDC85CA6NKD9 419 aa18.54■□□□□ 0.56
SSB-204ENST00000417292 BTBD11A6QL63 1104 aa18.54■□□□□ 0.56
SSB-204ENST00000417292 RGS19P49795 217 aa18.54■□□□□ 0.56
SSB-204ENST00000417292 MLLT1Q03111 559 aaPredicted RBP18.54■□□□□ 0.56
SSB-204ENST00000417292 TPTE2Q6XPS3 522 aa18.54■□□□□ 0.56
SSB-204ENST00000417292 CAPNS2Q96L46 248 aa18.54■□□□□ 0.56
SSB-204ENST00000417292 FAM177BA6PVY3 158 aa18.53■□□□□ 0.56
SSB-204ENST00000417292 U2SURPO15042 1029 aaKnown RBP18.53■□□□□ 0.56
SSB-204ENST00000417292 NIP7Q9Y221 180 aaKnown RBP eCLIP18.53■□□□□ 0.56
SSB-204ENST00000417292 ZNF652Q9Y2D9 606 aa18.53■□□□□ 0.56
SSB-204ENST00000417292 NBPF26B4DH59 902 aa18.52■□□□□ 0.56
SSB-204ENST00000417292 ALDH1B1P30837 517 aa18.52■□□□□ 0.56
SSB-204ENST00000417292 CC2D1BQ5T0F9 858 aaKnown RBP18.52■□□□□ 0.56
SSB-204ENST00000417292 CYP4F22Q6NT55 531 aa18.52■□□□□ 0.56
SSB-204ENST00000417292 NBPF10Q6P3W6 841 aaKnown RBP18.52■□□□□ 0.56
SSB-204ENST00000417292 NBPF15Q8N660 670 aa18.52■□□□□ 0.56
SSB-204ENST00000417292 GJA3Q9Y6H8 435 aa18.52■□□□□ 0.56
SSB-204ENST00000417292 PER1O15534 1290 aaPredicted RBP18.51■□□□□ 0.55
SSB-204ENST00000417292 SCNN1DP51172 638 aa18.51■□□□□ 0.55
SSB-204ENST00000417292 GRM1Q13255 1194 aa18.51■□□□□ 0.55
SSB-204ENST00000417292 CST9Q5W186 159 aa18.51■□□□□ 0.55
SSB-204ENST00000417292 PAXIP1Q6ZW49 1069 aaPredicted RBP18.51■□□□□ 0.55
SSB-204ENST00000417292 JDP2Q8WYK2 163 aa18.51■□□□□ 0.55
SSB-204ENST00000417292 PHACTR3Q96KR7 559 aa18.51■□□□□ 0.55
SSB-204ENST00000417292 GPR101Q96P66 508 aaPredicted RBP18.51■□□□□ 0.55
SSB-204ENST00000417292 PSMD1Q99460 953 aa18.51■□□□□ 0.55
SSB-204ENST00000417292 TSKSQ9UJT2 592 aa18.51■□□□□ 0.55
SSB-204ENST00000417292 TRAF5O00463 557 aa18.5■□□□□ 0.55
SSB-204ENST00000417292 EPS15P42566 896 aa18.5■□□□□ 0.55
SSB-204ENST00000417292 HLFQ16534 295 aa18.5■□□□□ 0.55
SSB-204ENST00000417292 ECE1P42892 770 aa18.49■□□□□ 0.55
SSB-204ENST00000417292 CRY2Q49AN0 593 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms