RNA–Protein interactions for RNA: ENST00000416380.6

YIPF3-203, Transcript of Yip1 domain family member 3, humanhuman

TSL 5

Gene YIPF3, Length 1,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-203ENST00000416380 COPS6Q7L5N1 327 aa16.44■□□□□ 0.22
YIPF3-203ENST00000416380 G2E3Q7L622 706 aa16.44■□□□□ 0.22
YIPF3-203ENST00000416380 XAGE3Q8WTP9 111 aa16.44■□□□□ 0.22
YIPF3-203ENST00000416380 PHAXQ9H814 394 aaKnown RBP16.44■□□□□ 0.22
YIPF3-203ENST00000416380 NRXN2Q9P2S2 1712 aa16.44■□□□□ 0.22
YIPF3-203ENST00000416380 MAP3K15Q6ZN16 1313 aa16.44■□□□□ 0.22
YIPF3-203ENST00000416380 MMP10P09238 476 aa16.43■□□□□ 0.22
YIPF3-203ENST00000416380 TBC1D9BQ66K14 1250 aa16.43■□□□□ 0.22
YIPF3-203ENST00000416380 CLEC4GQ6UXB4 293 aa16.43■□□□□ 0.22
YIPF3-203ENST00000416380 TCERG1O14776 1098 aaKnown RBP16.42■□□□□ 0.22
YIPF3-203ENST00000416380 ZPR1O75312 459 aa16.42■□□□□ 0.22
YIPF3-203ENST00000416380 ATP10DQ9P241 1426 aa16.42■□□□□ 0.22
YIPF3-203ENST00000416380 CCDC30Q5VVM6 783 aa16.41■□□□□ 0.22
YIPF3-203ENST00000416380 ZNF34Q8IZ26 560 aa16.41■□□□□ 0.22
YIPF3-203ENST00000416380 ARXQ96QS3 562 aa16.41■□□□□ 0.22
YIPF3-203ENST00000416380 HYPKQ9NX55 129 aa16.41■□□□□ 0.22
YIPF3-203ENST00000416380 ZNF330Q9Y3S2 320 aaPredicted RBP16.41■□□□□ 0.22
YIPF3-203ENST00000416380 UBN2Q6ZU65 1347 aa16.41■□□□□ 0.22
YIPF3-203ENST00000416380 KIAA1551Q9HCM1 1747 aa16.4■□□□□ 0.22
YIPF3-203ENST00000416380 C10orf71Q711Q0 1435 aa16.4■□□□□ 0.22
YIPF3-203ENST00000416380 GIGYF2Q6Y7W6 1299 aaKnown RBP16.4■□□□□ 0.22
YIPF3-203ENST00000416380 ZBTB3Q9H5J0 574 aa16.4■□□□□ 0.22
YIPF3-203ENST00000416380 ADCY9O60503 1353 aa16.39■□□□□ 0.21
YIPF3-203ENST00000416380 SLC4A2P04920 1241 aa16.38■□□□□ 0.21
YIPF3-203ENST00000416380 MRPL50Q8N5N7 158 aaKnown RBP16.38■□□□□ 0.21
YIPF3-203ENST00000416380 SSH1Q8WYL5 1049 aa16.38■□□□□ 0.21
YIPF3-203ENST00000416380 CARMIL3Q8ND23 1372 aa16.38■□□□□ 0.21
YIPF3-203ENST00000416380 AIMP1Q12904 312 aaKnown RBP16.37■□□□□ 0.21
YIPF3-203ENST00000416380 ANKRD13DQ6ZTN6 518 aa16.37■□□□□ 0.21
YIPF3-203ENST00000416380 PLBD2Q8NHP8 589 aa16.37■□□□□ 0.21
YIPF3-203ENST00000416380 ISCA1Q9BUE6 129 aa16.37■□□□□ 0.21
YIPF3-203ENST00000416380 FHDC1Q9C0D6 1143 aaPredicted RBP16.37■□□□□ 0.21
YIPF3-203ENST00000416380 KIF13BQ9NQT8 1826 aa16.37■□□□□ 0.21
YIPF3-203ENST00000416380 SERPINB2P05120 415 aa16.36■□□□□ 0.21
YIPF3-203ENST00000416380 POLD1P28340 1107 aa16.36■□□□□ 0.21
YIPF3-203ENST00000416380 BRPF1P55201 1214 aaPredicted RBP16.36■□□□□ 0.21
YIPF3-203ENST00000416380 SYT17Q9BSW7 474 aa16.36■□□□□ 0.21
YIPF3-203ENST00000416380 NUP98P52948 1817 aa16.35■□□□□ 0.21
YIPF3-203ENST00000416380 CT47B1P0C2W7 299 aaPredicted RBP16.35■□□□□ 0.21
YIPF3-203ENST00000416380 FLIIQ13045 1269 aa16.35■□□□□ 0.21
YIPF3-203ENST00000416380 TCIRG1Q13488 830 aa16.35■□□□□ 0.21
YIPF3-203ENST00000416380 PRR5LQ6MZQ0 368 aa16.35■□□□□ 0.21
YIPF3-203ENST00000416380 KIF6Q6ZMV9 814 aa16.35■□□□□ 0.21
YIPF3-203ENST00000416380 NLGN2Q8NFZ4 835 aa16.35■□□□□ 0.21
YIPF3-203ENST00000416380 ZNF428Q96B54 188 aa16.35■□□□□ 0.21
YIPF3-203ENST00000416380 CD2APQ9Y5K6 639 aa16.35■□□□□ 0.21
YIPF3-203ENST00000416380 AFDNP55196 1824 aaKnown RBP16.35■□□□□ 0.21
YIPF3-203ENST00000416380 NTSR2O95665 410 aa16.34■□□□□ 0.21
YIPF3-203ENST00000416380 KCNA3P22001 575 aa16.34■□□□□ 0.21
YIPF3-203ENST00000416380 RARSP54136 660 aaKnown RBP16.34■□□□□ 0.21
YIPF3-203ENST00000416380 TRIM28Q13263 835 aaKnown RBP16.34■□□□□ 0.21
YIPF3-203ENST00000416380 SUSD4Q5VX71 490 aa16.34■□□□□ 0.21
YIPF3-203ENST00000416380 BICDL1Q6ZP65 573 aa16.34■□□□□ 0.21
YIPF3-203ENST00000416380 CHMP4AQ9BY43 222 aa16.34■□□□□ 0.21
YIPF3-203ENST00000416380 IBTKQ9P2D0 1353 aaPredicted RBP16.34■□□□□ 0.21
YIPF3-203ENST00000416380 PXDNLA1KZ92 1463 aa16.34■□□□□ 0.21
YIPF3-203ENST00000416380 ARFGEF2Q9Y6D5 1785 aa16.33■□□□□ 0.21
YIPF3-203ENST00000416380 IGKV5-2P06315 115 aa16.33■□□□□ 0.2
YIPF3-203ENST00000416380 ALDH1L2Q3SY69 923 aa16.33■□□□□ 0.2
YIPF3-203ENST00000416380 KSR2Q6VAB6 950 aa16.33■□□□□ 0.2
YIPF3-203ENST00000416380 NLRP10Q86W26 655 aa16.33■□□□□ 0.2
YIPF3-203ENST00000416380 NIP7Q9Y221 180 aaKnown RBP eCLIP16.33■□□□□ 0.2
YIPF3-203ENST00000416380 PARP3Q9Y6F1 533 aa16.33■□□□□ 0.2
YIPF3-203ENST00000416380 KLRG2A4D1S0 409 aaPredicted RBP16.32■□□□□ 0.2
YIPF3-203ENST00000416380 PI4KAP2A4QPH2 592 aa16.32■□□□□ 0.2
YIPF3-203ENST00000416380 PI4KAP1Q8N8J0 262 aa16.32■□□□□ 0.2
YIPF3-203ENST00000416380 SETDB2Q96T68 719 aa16.32■□□□□ 0.2
YIPF3-203ENST00000416380 METTL22Q9BUU2 404 aaPredicted RBP16.32■□□□□ 0.2
YIPF3-203ENST00000416380 STK31Q9BXU1 1019 aa16.32■□□□□ 0.2
YIPF3-203ENST00000416380 ZNF652Q9Y2D9 606 aa16.32■□□□□ 0.2
YIPF3-203ENST00000416380 ANKRD31Q8N7Z5 1873 aa16.31■□□□□ 0.2
YIPF3-203ENST00000416380 ANKRD36CQ5JPF3 1778 aa16.31■□□□□ 0.2
YIPF3-203ENST00000416380 ABCC12Q96J65 1359 aa16.31■□□□□ 0.2
YIPF3-203ENST00000416380 GPTP24298 496 aa16.31■□□□□ 0.2
YIPF3-203ENST00000416380 RIC1Q4ADV7 1423 aa16.3■□□□□ 0.2
YIPF3-203ENST00000416380 SYNE4Q8N205 404 aa16.3■□□□□ 0.2
YIPF3-203ENST00000416380 CCDC24Q8N4L8 307 aa16.3■□□□□ 0.2
YIPF3-203ENST00000416380 MAP3K2Q9Y2U5 619 aa16.3■□□□□ 0.2
YIPF3-203ENST00000416380 SLC10A5Q5PT55 438 aa16.29■□□□□ 0.2
YIPF3-203ENST00000416380 C3orf67Q6ZVT6 689 aa16.29■□□□□ 0.2
YIPF3-203ENST00000416380 NPM2Q86SE8 214 aaKnown RBP16.29■□□□□ 0.2
YIPF3-203ENST00000416380 BCL2L13Q9BXK5 485 aa16.29■□□□□ 0.2
YIPF3-203ENST00000416380 TNRC6CQ9HCJ0 1690 aaKnown RBP16.29■□□□□ 0.2
YIPF3-203ENST00000416380 F6X3S4 739 aa16.28■□□□□ 0.2
YIPF3-203ENST00000416380 ATP5J2-PTCD1G3V325 749 aa16.28■□□□□ 0.2
YIPF3-203ENST00000416380 BCAR3O75815 825 aa16.28■□□□□ 0.2
YIPF3-203ENST00000416380 ERFEQ4G0M1 354 aa16.28■□□□□ 0.2
YIPF3-203ENST00000416380 PARP10Q53GL7 1025 aa16.28■□□□□ 0.2
YIPF3-203ENST00000416380 HSP90AB3PQ58FF7 597 aa16.28■□□□□ 0.2
YIPF3-203ENST00000416380 BEND3Q5T5X7 828 aa16.28■□□□□ 0.2
YIPF3-203ENST00000416380 BRIP1Q9BX63 1249 aa16.28■□□□□ 0.2
YIPF3-203ENST00000416380 CASP7P55210 303 aa16.27■□□□□ 0.2
YIPF3-203ENST00000416380 TGFB2P61812 414 aa16.27■□□□□ 0.2
YIPF3-203ENST00000416380 RIC3Q7Z5B4 369 aa16.27■□□□□ 0.2
YIPF3-203ENST00000416380 NUTM1Q86Y26 1132 aa16.27■□□□□ 0.2
YIPF3-203ENST00000416380 PPP1R1BQ9UD71 204 aaPredicted RBP16.27■□□□□ 0.2
YIPF3-203ENST00000416380 CACNA1FO60840 1977 aa16.27■□□□□ 0.19
YIPF3-203ENST00000416380 COL11A2P13942 1736 aaPredicted RBP16.27■□□□□ 0.19
YIPF3-203ENST00000416380 NEURL1BA8MQ27 555 aa16.26■□□□□ 0.19
YIPF3-203ENST00000416380 DPEP1P16444 411 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms