RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 ST5P78524 1137 aa12.71□□□□□ -0.37
LINC01238-201ENST00000416204 FMR1Q06787 632 aaKnown RBP eCLIP12.71□□□□□ -0.37
LINC01238-201ENST00000416204 STYK1Q6J9G0 422 aa12.71□□□□□ -0.37
LINC01238-201ENST00000416204 ABHD8Q96I13 439 aa12.71□□□□□ -0.37
LINC01238-201ENST00000416204 WBP1LQ9NX94 342 aa12.71□□□□□ -0.37
LINC01238-201ENST00000416204 KNSTRNQ9Y448 316 aa12.71□□□□□ -0.37
LINC01238-201ENST00000416204 SCN7AQ01118 1682 aa12.7□□□□□ -0.38
LINC01238-201ENST00000416204 DICER1Q9UPY3 1922 aaKnown RBP12.7□□□□□ -0.38
LINC01238-201ENST00000416204 HSPA8P11142 646 aaKnown RBP12.7□□□□□ -0.38
LINC01238-201ENST00000416204 MASTLQ96GX5 879 aa12.7□□□□□ -0.38
LINC01238-201ENST00000416204 ABT1Q9ULW3 272 aaKnown RBP12.7□□□□□ -0.38
LINC01238-201ENST00000416204 HEG1Q9ULI3 1381 aa12.69□□□□□ -0.38
LINC01238-201ENST00000416204 UBR2Q8IWV8 1755 aa12.69□□□□□ -0.38
LINC01238-201ENST00000416204 PRAMEF22A3QJZ6 481 aa12.69□□□□□ -0.38
LINC01238-201ENST00000416204 SLC34A2O95436 690 aa12.69□□□□□ -0.38
LINC01238-201ENST00000416204 EPHX2P34913 555 aa12.69□□□□□ -0.38
LINC01238-201ENST00000416204 TEFQ10587 303 aa12.69□□□□□ -0.38
LINC01238-201ENST00000416204 ZNF790Q6PG37 636 aa12.69□□□□□ -0.38
LINC01238-201ENST00000416204 PAXIP1Q6ZW49 1069 aaPredicted RBP12.69□□□□□ -0.38
LINC01238-201ENST00000416204 NPM2Q86SE8 214 aaKnown RBP12.69□□□□□ -0.38
LINC01238-201ENST00000416204 NBPF5PQ86XG9 351 aaPredicted RBP12.69□□□□□ -0.38
LINC01238-201ENST00000416204 IL17REQ8NFR9 667 aa12.69□□□□□ -0.38
LINC01238-201ENST00000416204 L3MBTL3Q96JM7 780 aaPredicted RBP12.69□□□□□ -0.38
LINC01238-201ENST00000416204 HACL1Q9UJ83 578 aa12.69□□□□□ -0.38
LINC01238-201ENST00000416204 TSKSQ9UJT2 592 aa12.69□□□□□ -0.38
LINC01238-201ENST00000416204 VIRMAQ69YN4 1812 aaKnown RBP12.69□□□□□ -0.38
LINC01238-201ENST00000416204 CCDC85CA6NKD9 419 aa12.68□□□□□ -0.38
LINC01238-201ENST00000416204 IL6STP40189 918 aaPredicted RBP12.68□□□□□ -0.38
LINC01238-201ENST00000416204 EIF4G2P78344 907 aaKnown RBP eCLIP12.68□□□□□ -0.38
LINC01238-201ENST00000416204 DEFB115Q30KQ5 88 aa12.68□□□□□ -0.38
LINC01238-201ENST00000416204 CCDC93Q567U6 631 aa12.68□□□□□ -0.38
LINC01238-201ENST00000416204 SLC51AQ86UW1 340 aa12.68□□□□□ -0.38
LINC01238-201ENST00000416204 DZIP3Q86Y13 1208 aaKnown RBP12.68□□□□□ -0.38
LINC01238-201ENST00000416204 CNTROBQ8N137 903 aa12.68□□□□□ -0.38
LINC01238-201ENST00000416204 C7orf43Q8WVR3 580 aa12.68□□□□□ -0.38
LINC01238-201ENST00000416204 PDZRN3Q9UPQ7 1066 aa12.68□□□□□ -0.38
LINC01238-201ENST00000416204 WDR33Q9C0J8 1336 aaKnown RBP12.67□□□□□ -0.38
LINC01238-201ENST00000416204 U2SURPO15042 1029 aaKnown RBP12.67□□□□□ -0.38
LINC01238-201ENST00000416204 DIAPH1O60610 1272 aaKnown RBP12.67□□□□□ -0.38
LINC01238-201ENST00000416204 FKBP4Q02790 459 aaKnown RBP eCLIP12.67□□□□□ -0.38
LINC01238-201ENST00000416204 AMER1Q5JTC6 1135 aaPredicted RBP12.67□□□□□ -0.38
LINC01238-201ENST00000416204 CC2D1BQ5T0F9 858 aaKnown RBP12.67□□□□□ -0.38
LINC01238-201ENST00000416204 SOGA3Q5TF21 947 aa12.67□□□□□ -0.38
LINC01238-201ENST00000416204 GJA3Q9Y6H8 435 aa12.67□□□□□ -0.38
LINC01238-201ENST00000416204 FMNL2Q96PY5 1086 aa12.66□□□□□ -0.38
LINC01238-201ENST00000416204 USP16Q9Y5T5 823 aa12.66□□□□□ -0.38
LINC01238-201ENST00000416204 RASSF10A6NK89 507 aa12.65□□□□□ -0.38
LINC01238-201ENST00000416204 GNAT3A8MTJ3 354 aa12.65□□□□□ -0.38
LINC01238-201ENST00000416204 NPR1P16066 1061 aa12.65□□□□□ -0.38
LINC01238-201ENST00000416204 SYNE4Q8N205 404 aa12.65□□□□□ -0.38
LINC01238-201ENST00000416204 CFAP44Q96MT7 982 aa12.65□□□□□ -0.38
LINC01238-201ENST00000416204 PCGF6Q9BYE7 350 aa12.65□□□□□ -0.38
LINC01238-201ENST00000416204 TRAF5O00463 557 aa12.64□□□□□ -0.39
LINC01238-201ENST00000416204 IARSP41252 1262 aaKnown RBP12.64□□□□□ -0.39
LINC01238-201ENST00000416204 CYP4F22Q6NT55 531 aa12.64□□□□□ -0.39
LINC01238-201ENST00000416204 TEX13AQ9BXU3 409 aaPredicted RBP12.64□□□□□ -0.39
LINC01238-201ENST00000416204 SCN4AP35499 1836 aa12.64□□□□□ -0.39
LINC01238-201ENST00000416204 BTBD11A6QL63 1104 aa12.63□□□□□ -0.39
LINC01238-201ENST00000416204 TCERG1O14776 1098 aaKnown RBP12.63□□□□□ -0.39
LINC01238-201ENST00000416204 MAP2K1Q02750 393 aaPredicted RBP12.63□□□□□ -0.39
LINC01238-201ENST00000416204 CAPNS2Q96L46 248 aa12.63□□□□□ -0.39
LINC01238-201ENST00000416204 DDX21Q9NR30 783 aaKnown RBP eCLIP12.63□□□□□ -0.39
LINC01238-201ENST00000416204 NIP7Q9Y221 180 aaKnown RBP eCLIP12.63□□□□□ -0.39
LINC01238-201ENST00000416204 ADAMTSL1Q8N6G6 1762 aa12.63□□□□□ -0.39
LINC01238-201ENST00000416204 ARFGEF2Q9Y6D5 1785 aa12.62□□□□□ -0.39
LINC01238-201ENST00000416204 COL4A5P29400 1685 aa12.62□□□□□ -0.39
LINC01238-201ENST00000416204 FZD9O00144 591 aa12.62□□□□□ -0.39
LINC01238-201ENST00000416204 AOC2O75106 756 aa12.62□□□□□ -0.39
LINC01238-201ENST00000416204 MLLT1Q03111 559 aaPredicted RBP12.62□□□□□ -0.39
LINC01238-201ENST00000416204 HLFQ16534 295 aa12.62□□□□□ -0.39
LINC01238-201ENST00000416204 PNMA8AQ86V59 439 aaPredicted RBP12.62□□□□□ -0.39
LINC01238-201ENST00000416204 PHACTR3Q96KR7 559 aa12.62□□□□□ -0.39
LINC01238-201ENST00000416204 BCORQ6W2J9 1755 aa12.61□□□□□ -0.39
LINC01238-201ENST00000416204 EPS15P42566 896 aa12.61□□□□□ -0.39
LINC01238-201ENST00000416204 NUTM1Q86Y26 1132 aa12.61□□□□□ -0.39
LINC01238-201ENST00000416204 RTKN2Q8IZC4 609 aa12.61□□□□□ -0.39
LINC01238-201ENST00000416204 GPC2Q8N158 579 aa12.61□□□□□ -0.39
LINC01238-201ENST00000416204 NGEFQ8N5V2 710 aa12.61□□□□□ -0.39
LINC01238-201ENST00000416204 GAS2L2Q8NHY3 880 aa12.61□□□□□ -0.39
LINC01238-201ENST00000416204 NBPF26B4DH59 902 aa12.6□□□□□ -0.39
LINC01238-201ENST00000416204 GTF2E1P29083 439 aaPredicted RBP12.6□□□□□ -0.39
LINC01238-201ENST00000416204 NBPF10Q6P3W6 841 aaKnown RBP12.6□□□□□ -0.39
LINC01238-201ENST00000416204 TPTE2Q6XPS3 522 aa12.6□□□□□ -0.39
LINC01238-201ENST00000416204 MCM10Q7L590 875 aa12.6□□□□□ -0.39
LINC01238-201ENST00000416204 NBPF15Q8N660 670 aa12.6□□□□□ -0.39
LINC01238-201ENST00000416204 JDP2Q8WYK2 163 aa12.6□□□□□ -0.39
LINC01238-201ENST00000416204 GPR101Q96P66 508 aaPredicted RBP12.6□□□□□ -0.39
LINC01238-201ENST00000416204 BEGAINQ9BUH8 593 aa12.6□□□□□ -0.39
LINC01238-201ENST00000416204 ZNF652Q9Y2D9 606 aa12.6□□□□□ -0.39
LINC01238-201ENST00000416204 LTBP1Q14766 1721 aa12.59□□□□□ -0.39
LINC01238-201ENST00000416204 ABCC12Q96J65 1359 aa12.59□□□□□ -0.39
LINC01238-201ENST00000416204 SIPA1L3O60292 1781 aaPredicted RBP12.59□□□□□ -0.39
LINC01238-201ENST00000416204 KLRG2A4D1S0 409 aaPredicted RBP12.59□□□□□ -0.39
LINC01238-201ENST00000416204 LMOD1P29536 600 aaPredicted RBP12.59□□□□□ -0.39
LINC01238-201ENST00000416204 EIF6P56537 245 aaKnown RBP12.59□□□□□ -0.39
LINC01238-201ENST00000416204 DCTN1Q14203 1278 aa12.59□□□□□ -0.39
LINC01238-201ENST00000416204 CST9Q5W186 159 aa12.59□□□□□ -0.39
LINC01238-201ENST00000416204 TIMELESSQ9UNS1 1208 aa12.59□□□□□ -0.39
LINC01238-201ENST00000416204 COL3A1P02461 1466 aaPredicted RBP12.59□□□□□ -0.39
LINC01238-201ENST00000416204 TNRC18O15417 2968 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms