RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 WWC2Q6AWC2 1192 aa18.37■□□□□ 0.53
PHRF1-203ENST00000416188 CCDC8Q9H0W5 538 aaPredicted RBP18.37■□□□□ 0.53
PHRF1-203ENST00000416188 FILIP1LQ4L180 1135 aa18.36■□□□□ 0.53
PHRF1-203ENST00000416188 HSP90B2PQ58FF3 399 aa18.36■□□□□ 0.53
PHRF1-203ENST00000416188 ZFYVE27Q5T4F4 411 aa18.36■□□□□ 0.53
PHRF1-203ENST00000416188 JAKMIP1Q96N16 626 aaKnown RBP18.36■□□□□ 0.53
PHRF1-203ENST00000416188 HDAC9Q9UKV0 1011 aa18.36■□□□□ 0.53
PHRF1-203ENST00000416188 KDM6BO15054 1643 aa18.36■□□□□ 0.53
PHRF1-203ENST00000416188 RARSP54136 660 aaKnown RBP18.36■□□□□ 0.53
PHRF1-203ENST00000416188 CAGE1Q8TC20 777 aa18.36■□□□□ 0.53
PHRF1-203ENST00000416188 CCDC192P0DO97 292 aa18.35■□□□□ 0.53
PHRF1-203ENST00000416188 TNMDQ9H2S6 317 aa18.35■□□□□ 0.53
PHRF1-203ENST00000416188 RNMTO43148 476 aaKnown RBP18.34■□□□□ 0.53
PHRF1-203ENST00000416188 GLRX3O76003 335 aaKnown RBP18.34■□□□□ 0.53
PHRF1-203ENST00000416188 PDRG1Q9NUG6 133 aa18.34■□□□□ 0.53
PHRF1-203ENST00000416188 UGGT1Q9NYU2 1555 aa18.34■□□□□ 0.53
PHRF1-203ENST00000416188 NAPBQ9H115 298 aa18.34■□□□□ 0.53
PHRF1-203ENST00000416188 ACBD3Q9H3P7 528 aa18.34■□□□□ 0.53
PHRF1-203ENST00000416188 IMMTQ16891 758 aaKnown RBP18.34■□□□□ 0.53
PHRF1-203ENST00000416188 FEZ1Q99689 392 aa18.34■□□□□ 0.53
PHRF1-203ENST00000416188 ZC3H12CQ9C0D7 883 aaKnown RBP18.34■□□□□ 0.53
PHRF1-203ENST00000416188 SPTY2D1Q68D10 685 aaPredicted RBP18.33■□□□□ 0.53
PHRF1-203ENST00000416188 EIF2AK4Q9P2K8 1649 aaKnown RBP18.33■□□□□ 0.53
PHRF1-203ENST00000416188 MYO5CQ9NQX4 1742 aa18.33■□□□□ 0.53
PHRF1-203ENST00000416188 KRT18P05783 430 aaKnown RBP18.33■□□□□ 0.52
PHRF1-203ENST00000416188 CCDC173Q0VFZ6 552 aa18.33■□□□□ 0.52
PHRF1-203ENST00000416188 MAGEC2Q9UBF1 373 aaPredicted RBP18.33■□□□□ 0.52
PHRF1-203ENST00000416188 MAP3K5Q99683 1374 aa18.33■□□□□ 0.52
PHRF1-203ENST00000416188 ADGRL2O95490 1459 aa18.33■□□□□ 0.52
PHRF1-203ENST00000416188 C20orf194Q5TEA3 1177 aa18.33■□□□□ 0.52
PHRF1-203ENST00000416188 ZNF444Q8N0Y2 327 aaPredicted RBP18.33■□□□□ 0.52
PHRF1-203ENST00000416188 NSFL1CQ9UNZ2 370 aaKnown RBP18.33■□□□□ 0.52
PHRF1-203ENST00000416188 BAG3O95817 575 aa18.32■□□□□ 0.52
PHRF1-203ENST00000416188 SERPINC1P01008 464 aa18.32■□□□□ 0.52
PHRF1-203ENST00000416188 CNBD1Q8NA66 436 aa18.32■□□□□ 0.52
PHRF1-203ENST00000416188 SKAP1Q86WV1 359 aa18.32■□□□□ 0.52
PHRF1-203ENST00000416188 PIBF1Q8WXW3 757 aa18.32■□□□□ 0.52
PHRF1-203ENST00000416188 MLH3Q9UHC1 1453 aa18.32■□□□□ 0.52
PHRF1-203ENST00000416188 PLEKHG1Q9ULL1 1385 aa18.32■□□□□ 0.52
PHRF1-203ENST00000416188 FBXO3Q9UK99 471 aa18.31■□□□□ 0.52
PHRF1-203ENST00000416188 CFAP65Q6ZU64 1925 aaKnown RBP18.31■□□□□ 0.52
PHRF1-203ENST00000416188 F8W031 263 aaPredicted RBP18.31■□□□□ 0.52
PHRF1-203ENST00000416188 SMARCE1Q969G3 411 aa18.31■□□□□ 0.52
PHRF1-203ENST00000416188 COL17A1Q9UMD9 1497 aaPredicted RBP18.31■□□□□ 0.52
PHRF1-203ENST00000416188 CDR1P51861 262 aa18.31■□□□□ 0.52
PHRF1-203ENST00000416188 EFCAB6Q5THR3 1501 aa18.31■□□□□ 0.52
PHRF1-203ENST00000416188 ASXL1Q8IXJ9 1541 aa18.31■□□□□ 0.52
PHRF1-203ENST00000416188 MYCNP04198 464 aaPredicted RBP18.31■□□□□ 0.52
PHRF1-203ENST00000416188 MX1P20591 662 aa18.31■□□□□ 0.52
PHRF1-203ENST00000416188 ZNF76P36508 570 aa18.31■□□□□ 0.52
PHRF1-203ENST00000416188 ERCC6L2Q5T890 1561 aa18.3■□□□□ 0.52
PHRF1-203ENST00000416188 MCM4P33991 863 aa18.3■□□□□ 0.52
PHRF1-203ENST00000416188 TESK2Q96S53 571 aa18.3■□□□□ 0.52
PHRF1-203ENST00000416188 ZCCHC11Q5TAX3 1644 aaKnown RBP18.3■□□□□ 0.52
PHRF1-203ENST00000416188 SMARCA5O60264 1052 aaPredicted RBP18.3■□□□□ 0.52
PHRF1-203ENST00000416188 RBM26Q5T8P6 1007 aaKnown RBP18.3■□□□□ 0.52
PHRF1-203ENST00000416188 SNRKQ9NRH2 765 aa18.3■□□□□ 0.52
PHRF1-203ENST00000416188 SBNO1A3KN83 1393 aa18.3■□□□□ 0.52
PHRF1-203ENST00000416188 PIK3C2GO75747 1445 aa18.3■□□□□ 0.52
PHRF1-203ENST00000416188 KRI1Q8N9T8 703 aaKnown RBP18.3■□□□□ 0.52
PHRF1-203ENST00000416188 LMOD1P29536 600 aaPredicted RBP18.3■□□□□ 0.52
PHRF1-203ENST00000416188 SPATA32Q96LK8 384 aa18.3■□□□□ 0.52
PHRF1-203ENST00000416188 PLEKHG3A1L390 1219 aa18.29■□□□□ 0.52
PHRF1-203ENST00000416188 HLA-DOAP06340 250 aa18.29■□□□□ 0.52
PHRF1-203ENST00000416188 IL16Q14005 1332 aa18.29■□□□□ 0.52
PHRF1-203ENST00000416188 EDC4Q6P2E9 1401 aaKnown RBP18.29■□□□□ 0.52
PHRF1-203ENST00000416188 CABP5Q9NP86 173 aa18.29■□□□□ 0.52
PHRF1-203ENST00000416188 NF2P35240 595 aa18.29■□□□□ 0.52
PHRF1-203ENST00000416188 CCDC96Q2M329 555 aa18.29■□□□□ 0.52
PHRF1-203ENST00000416188 KSR2Q6VAB6 950 aa18.29■□□□□ 0.52
PHRF1-203ENST00000416188 ZSCAN31Q96LW9 406 aaPredicted RBP18.29■□□□□ 0.52
PHRF1-203ENST00000416188 UPF3BQ9BZI7 483 aaKnown RBP18.29■□□□□ 0.52
PHRF1-203ENST00000416188 PZPP20742 1482 aa18.29■□□□□ 0.52
PHRF1-203ENST00000416188 GRPEL1Q9HAV7 217 aa18.28■□□□□ 0.52
PHRF1-203ENST00000416188 EYA3Q99504 573 aa18.28■□□□□ 0.52
PHRF1-203ENST00000416188 CARD14Q9BXL6 1004 aa18.28■□□□□ 0.52
PHRF1-203ENST00000416188 ZHX3Q9H4I2 956 aa18.28■□□□□ 0.52
PHRF1-203ENST00000416188 CIZ1Q9ULV3 898 aaPredicted RBP18.28■□□□□ 0.52
PHRF1-203ENST00000416188 RANBP6O60518 1105 aaKnown RBP18.28■□□□□ 0.52
PHRF1-203ENST00000416188 CASTP20810 708 aaKnown RBP18.27■□□□□ 0.52
PHRF1-203ENST00000416188 CHMP4BP1P59074 171 aa18.27■□□□□ 0.52
PHRF1-203ENST00000416188 KRT32Q14532 448 aa18.27■□□□□ 0.52
PHRF1-203ENST00000416188 DDX11Q96FC9 970 aa18.27■□□□□ 0.52
PHRF1-203ENST00000416188 IQSEC3Q9UPP2 1182 aaPredicted RBP18.27■□□□□ 0.52
PHRF1-203ENST00000416188 KDM5DQ9BY66 1539 aa18.27■□□□□ 0.52
PHRF1-203ENST00000416188 TTF1Q15361 905 aaPredicted RBP18.27■□□□□ 0.52
PHRF1-203ENST00000416188 LMBR1LQ6UX01 489 aa18.27■□□□□ 0.52
PHRF1-203ENST00000416188 ZFYVE9O95405 1425 aa18.27■□□□□ 0.52
PHRF1-203ENST00000416188 IRS4O14654 1257 aaPredicted RBP18.27■□□□□ 0.52
PHRF1-203ENST00000416188 ZNF804AQ7Z570 1209 aa18.27■□□□□ 0.52
PHRF1-203ENST00000416188 RBM17Q96I25 401 aaKnown RBP18.26■□□□□ 0.51
PHRF1-203ENST00000416188 GSTO1P78417 241 aa18.26■□□□□ 0.51
PHRF1-203ENST00000416188 U3KPZ7 1027 aaPredicted RBP18.26■□□□□ 0.51
PHRF1-203ENST00000416188 NLRP1Q9C000 1473 aa18.26■□□□□ 0.51
PHRF1-203ENST00000416188 PLEKHH1Q9ULM0 1364 aa18.26■□□□□ 0.51
PHRF1-203ENST00000416188 RIMBP2O15034 1052 aa18.26■□□□□ 0.51
PHRF1-203ENST00000416188 UQCRFS1P1P0C7P4 283 aa18.26■□□□□ 0.51
PHRF1-203ENST00000416188 FERMT3Q86UX7 667 aa18.26■□□□□ 0.51
PHRF1-203ENST00000416188 CDKL5O76039 1030 aa18.25■□□□□ 0.51
PHRF1-203ENST00000416188 GPR162Q16538 588 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms