RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 NEXNQ0ZGT2 675 aa9.27□□□□□ -0.93
SIK3-203ENST00000415541 GPATCH11Q8N954 259 aa9.27□□□□□ -0.93
SIK3-203ENST00000415541 CEP83Q9Y592 693 aa9.27□□□□□ -0.93
SIK3-203ENST00000415541 CD2BP2O95400 341 aaKnown RBP9.26□□□□□ -0.93
SIK3-203ENST00000415541 UBTFL1P0CB47 393 aaPredicted RBP9.26□□□□□ -0.93
SIK3-203ENST00000415541 MUM1L1Q5H9M0 696 aa9.26□□□□□ -0.93
SIK3-203ENST00000415541 IL16Q14005 1332 aa9.26□□□□□ -0.93
SIK3-203ENST00000415541 A0A1B0GUL7 405 aa9.26□□□□□ -0.93
SIK3-203ENST00000415541 VAMP4O75379 141 aa9.26□□□□□ -0.93
SIK3-203ENST00000415541 GUCY2CP25092 1073 aa9.26□□□□□ -0.93
SIK3-203ENST00000415541 CCDC91Q7Z6B0 441 aa9.26□□□□□ -0.93
SIK3-203ENST00000415541 DRC7Q8IY82 874 aa9.26□□□□□ -0.93
SIK3-203ENST00000415541 C10orf67Q8IYJ2 551 aa9.26□□□□□ -0.93
SIK3-203ENST00000415541 RILPL2Q969X0 211 aa9.26□□□□□ -0.93
SIK3-203ENST00000415541 RBM42Q9BTD8 480 aaKnown RBP9.26□□□□□ -0.93
SIK3-203ENST00000415541 CCDC172P0C7W6 258 aa9.26□□□□□ -0.93
SIK3-203ENST00000415541 NOP2P46087 812 aaKnown RBP9.26□□□□□ -0.93
SIK3-203ENST00000415541 BRPF1P55201 1214 aaPredicted RBP9.26□□□□□ -0.93
SIK3-203ENST00000415541 TPD52L1Q16890 204 aaPredicted RBP9.26□□□□□ -0.93
SIK3-203ENST00000415541 ALDH1L2Q3SY69 923 aa9.26□□□□□ -0.93
SIK3-203ENST00000415541 CCDC183Q5T5S1 534 aa9.26□□□□□ -0.93
SIK3-203ENST00000415541 IP6K1Q92551 441 aa9.26□□□□□ -0.93
SIK3-203ENST00000415541 KIF2CQ99661 725 aa9.26□□□□□ -0.93
SIK3-203ENST00000415541 DDX58O95786 925 aaKnown RBP9.25□□□□□ -0.93
SIK3-203ENST00000415541 NBPF6Q5VWK0 638 aa9.25□□□□□ -0.93
SIK3-203ENST00000415541 AK7Q96M32 723 aa9.25□□□□□ -0.93
SIK3-203ENST00000415541 NBPF4Q96M43 638 aa9.25□□□□□ -0.93
SIK3-203ENST00000415541 ARGLU1Q9NWB6 273 aaPredicted RBP9.25□□□□□ -0.93
SIK3-203ENST00000415541 FAM135BQ49AJ0 1406 aa9.25□□□□□ -0.93
SIK3-203ENST00000415541 TMEM94Q12767 1356 aa9.25□□□□□ -0.93
SIK3-203ENST00000415541 SLFNL1Q499Z3 407 aa9.25□□□□□ -0.93
SIK3-203ENST00000415541 CHD1LQ86WJ1 897 aa9.25□□□□□ -0.93
SIK3-203ENST00000415541 PLEKHF1Q96S99 279 aa9.25□□□□□ -0.93
SIK3-203ENST00000415541 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.25□□□□□ -0.93
SIK3-203ENST00000415541 ARHGEF40Q8TER5 1519 aa9.25□□□□□ -0.93
SIK3-203ENST00000415541 NPHP4O75161 1426 aaPredicted RBP9.25□□□□□ -0.93
SIK3-203ENST00000415541 TULP4Q9NRJ4 1543 aa9.25□□□□□ -0.93
SIK3-203ENST00000415541 SLC39A6Q13433 755 aa9.25□□□□□ -0.93
SIK3-203ENST00000415541 ZNF592Q92610 1267 aa9.25□□□□□ -0.93
SIK3-203ENST00000415541 RICTORQ6R327 1708 aa9.25□□□□□ -0.93
SIK3-203ENST00000415541 SIGLEC1Q9BZZ2 1709 aa9.25□□□□□ -0.93
SIK3-203ENST00000415541 NUCB1Q02818 461 aa9.24□□□□□ -0.93
SIK3-203ENST00000415541 AMOTQ4VCS5 1084 aa9.24□□□□□ -0.93
SIK3-203ENST00000415541 C16orf45Q96MC5 204 aaPredicted RBP9.24□□□□□ -0.93
SIK3-203ENST00000415541 PTPRMP28827 1452 aa9.24□□□□□ -0.93
SIK3-203ENST00000415541 ERO1AQ96HE7 468 aa9.24□□□□□ -0.93
SIK3-203ENST00000415541 PYCARDQ9ULZ3 195 aa9.24□□□□□ -0.93
SIK3-203ENST00000415541 V9GYY5 206 aaPredicted RBP9.24□□□□□ -0.93
SIK3-203ENST00000415541 TTC31Q49AM3 519 aaPredicted RBP9.24□□□□□ -0.93
SIK3-203ENST00000415541 TPRNQ4KMQ1 711 aa9.24□□□□□ -0.93
SIK3-203ENST00000415541 KRBA2Q6ZNG9 492 aa9.24□□□□□ -0.93
SIK3-203ENST00000415541 TBC1D9Q6ZT07 1266 aa9.24□□□□□ -0.93
SIK3-203ENST00000415541 SPC24Q8NBT2 197 aa9.24□□□□□ -0.93
SIK3-203ENST00000415541 TMX1Q9H3N1 280 aa9.24□□□□□ -0.93
SIK3-203ENST00000415541 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.24□□□□□ -0.93
SIK3-203ENST00000415541 MYO1CO00159 1063 aa9.23□□□□□ -0.93
SIK3-203ENST00000415541 SURF6O75683 361 aaKnown RBP9.23□□□□□ -0.93
SIK3-203ENST00000415541 CCDC191Q8NCU4 936 aa9.23□□□□□ -0.93
SIK3-203ENST00000415541 JRKLQ9Y4A0 524 aa9.23□□□□□ -0.93
SIK3-203ENST00000415541 PREX1Q8TCU6 1659 aa9.23□□□□□ -0.93
SIK3-203ENST00000415541 USP6P35125 1406 aa9.23□□□□□ -0.93
SIK3-203ENST00000415541 GNAI3P08754 354 aa9.23□□□□□ -0.93
SIK3-203ENST00000415541 MCM2P49736 904 aa9.23□□□□□ -0.93
SIK3-203ENST00000415541 FOXD4L5Q5VV16 416 aaPredicted RBP9.23□□□□□ -0.93
SIK3-203ENST00000415541 FOXD4L4Q8WXT5 416 aaPredicted RBP9.23□□□□□ -0.93
SIK3-203ENST00000415541 LGR6Q9HBX8 967 aa9.23□□□□□ -0.93
SIK3-203ENST00000415541 SBNO1A3KN83 1393 aa9.23□□□□□ -0.93
SIK3-203ENST00000415541 ARHGEF28Q8N1W1 1705 aaKnown RBP9.23□□□□□ -0.93
SIK3-203ENST00000415541 KIF1CO43896 1103 aaKnown RBP9.23□□□□□ -0.93
SIK3-203ENST00000415541 CEP135Q66GS9 1140 aa9.23□□□□□ -0.93
SIK3-203ENST00000415541 SRCIN1Q9C0H9 1055 aa9.23□□□□□ -0.93
SIK3-203ENST00000415541 SLAIN2Q9P270 581 aa9.23□□□□□ -0.93
SIK3-203ENST00000415541 ADAMTS13Q76LX8 1427 aa9.22□□□□□ -0.93
SIK3-203ENST00000415541 GNAI2P04899 355 aa9.22□□□□□ -0.93
SIK3-203ENST00000415541 FLIIQ13045 1269 aa9.22□□□□□ -0.93
SIK3-203ENST00000415541 KIF1BPQ96EK5 621 aa9.22□□□□□ -0.93
SIK3-203ENST00000415541 TOMM22Q9NS69 142 aa9.22□□□□□ -0.93
SIK3-203ENST00000415541 ADGRB2O60241 1585 aa9.22□□□□□ -0.93
SIK3-203ENST00000415541 HCLS1P14317 486 aaPredicted RBP9.22□□□□□ -0.93
SIK3-203ENST00000415541 PIP4K2AP48426 406 aaPredicted RBP9.22□□□□□ -0.93
SIK3-203ENST00000415541 GCC1Q96CN9 775 aa9.22□□□□□ -0.93
SIK3-203ENST00000415541 KCNG1Q9UIX4 513 aa9.22□□□□□ -0.93
SIK3-203ENST00000415541 EXOC6BQ9Y2D4 811 aa9.22□□□□□ -0.93
SIK3-203ENST00000415541 LRRFIP2Q9Y608 721 aaKnown RBP9.22□□□□□ -0.93
SIK3-203ENST00000415541 ATP7BP35670 1465 aa9.22□□□□□ -0.93
SIK3-203ENST00000415541 KIF2AO00139 706 aaPredicted RBP9.22□□□□□ -0.93
SIK3-203ENST00000415541 CCT4P50991 539 aaKnown RBP9.22□□□□□ -0.93
SIK3-203ENST00000415541 KMT5BQ4FZB7 885 aa9.22□□□□□ -0.93
SIK3-203ENST00000415541 HSP90AB3PQ58FF7 597 aa9.22□□□□□ -0.93
SIK3-203ENST00000415541 MEX3CQ5U5Q3 659 aaKnown RBP9.22□□□□□ -0.93
SIK3-203ENST00000415541 SYT10Q6XYQ8 523 aa9.22□□□□□ -0.93
SIK3-203ENST00000415541 MRPL50Q8N5N7 158 aaKnown RBP9.22□□□□□ -0.93
SIK3-203ENST00000415541 TAOK2Q9UL54 1235 aa9.22□□□□□ -0.93
SIK3-203ENST00000415541 ZNF335Q9H4Z2 1342 aaPredicted RBP9.22□□□□□ -0.93
SIK3-203ENST00000415541 MX1P20591 662 aa9.21□□□□□ -0.93
SIK3-203ENST00000415541 TDO2P48775 406 aa9.21□□□□□ -0.93
SIK3-203ENST00000415541 SATB1Q01826 763 aa9.21□□□□□ -0.93
SIK3-203ENST00000415541 NOL8Q76FK4 1167 aaKnown RBP9.21□□□□□ -0.93
SIK3-203ENST00000415541 CCDC171Q6TFL3 1326 aa9.21□□□□□ -0.93
SIK3-203ENST00000415541 ZSCAN26Q16670 478 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms