RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 MASTLQ96GX5 879 aa8.71□□□□□ -1.02
LMBR1-204ENST00000415428 SLC52A2Q9HAB3 445 aa8.71□□□□□ -1.02
LMBR1-204ENST00000415428 DDX21Q9NR30 783 aaKnown RBP eCLIP8.7□□□□□ -1.02
LMBR1-204ENST00000415428 RFC4P35249 363 aa8.7□□□□□ -1.02
LMBR1-204ENST00000415428 AMPHP49418 695 aa8.7□□□□□ -1.02
LMBR1-204ENST00000415428 EIF4A2Q14240 407 aaKnown RBP8.7□□□□□ -1.02
LMBR1-204ENST00000415428 FAM161AQ3B820 660 aa8.7□□□□□ -1.02
LMBR1-204ENST00000415428 HACL1Q9UJ83 578 aa8.7□□□□□ -1.02
LMBR1-204ENST00000415428 ZBTB22O15209 634 aa8.7□□□□□ -1.02
LMBR1-204ENST00000415428 HSP90AB2PQ58FF8 381 aa8.7□□□□□ -1.02
LMBR1-204ENST00000415428 A0A1W2PPC1 479 aa8.69□□□□□ -1.02
LMBR1-204ENST00000415428 CAMTA2O94983 1202 aa8.69□□□□□ -1.02
LMBR1-204ENST00000415428 RASSF7Q02833 373 aa8.69□□□□□ -1.02
LMBR1-204ENST00000415428 PLEKHO1Q53GL0 409 aaPredicted RBP8.69□□□□□ -1.02
LMBR1-204ENST00000415428 CLSPNQ9HAW4 1339 aa8.69□□□□□ -1.02
LMBR1-204ENST00000415428 FKBP1BP68106 108 aa8.69□□□□□ -1.02
LMBR1-204ENST00000415428 DEFB115Q30KQ5 88 aa8.69□□□□□ -1.02
LMBR1-204ENST00000415428 NPR1P16066 1061 aa8.68□□□□□ -1.02
LMBR1-204ENST00000415428 PITPNM2Q9BZ72 1349 aa8.68□□□□□ -1.02
LMBR1-204ENST00000415428 IL13P35225 146 aa8.68□□□□□ -1.02
LMBR1-204ENST00000415428 MCOLN1Q9GZU1 580 aa8.68□□□□□ -1.02
LMBR1-204ENST00000415428 TAOK3Q9H2K8 898 aa8.68□□□□□ -1.02
LMBR1-204ENST00000415428 SERPINB2P05120 415 aa8.68□□□□□ -1.02
LMBR1-204ENST00000415428 ERBB4Q15303 1308 aa8.67□□□□□ -1.02
LMBR1-204ENST00000415428 CCDC93Q567U6 631 aa8.67□□□□□ -1.02
LMBR1-204ENST00000415428 SLC10A5Q5PT55 438 aa8.67□□□□□ -1.02
LMBR1-204ENST00000415428 PRR5LQ6MZQ0 368 aa8.67□□□□□ -1.02
LMBR1-204ENST00000415428 H0YIN7 160 aa8.67□□□□□ -1.02
LMBR1-204ENST00000415428 LBX1P52954 281 aa8.67□□□□□ -1.02
LMBR1-204ENST00000415428 KCNQ4P56696 695 aa8.67□□□□□ -1.02
LMBR1-204ENST00000415428 CST9Q5W186 159 aa8.67□□□□□ -1.02
LMBR1-204ENST00000415428 CRAMP1Q96RY5 1269 aa8.67□□□□□ -1.02
LMBR1-204ENST00000415428 HTATSF1O43719 755 aaKnown RBP8.66□□□□□ -1.02
LMBR1-204ENST00000415428 ZNF541Q9H0D2 1346 aa8.66□□□□□ -1.02
LMBR1-204ENST00000415428 MPRIPQ6WCQ1 1025 aa8.66□□□□□ -1.02
LMBR1-204ENST00000415428 SAPCD2Q86UD0 394 aa8.66□□□□□ -1.02
LMBR1-204ENST00000415428 ERVV-1B6SEH8 477 aa8.65□□□□□ -1.02
LMBR1-204ENST00000415428 EPHX2P34913 555 aa8.65□□□□□ -1.02
LMBR1-204ENST00000415428 TMC4Q7Z404 712 aa8.65□□□□□ -1.02
LMBR1-204ENST00000415428 C2CD5Q86YS7 1000 aa8.65□□□□□ -1.02
LMBR1-204ENST00000415428 SCNN1DP51172 638 aa8.65□□□□□ -1.03
LMBR1-204ENST00000415428 MAST2Q6P0Q8 1798 aa8.65□□□□□ -1.03
LMBR1-204ENST00000415428 MYH3P11055 1940 aa8.64□□□□□ -1.03
LMBR1-204ENST00000415428 SLC10A3P09131 477 aa8.64□□□□□ -1.03
LMBR1-204ENST00000415428 HTRA3P83110 453 aa8.64□□□□□ -1.03
LMBR1-204ENST00000415428 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.64□□□□□ -1.032e-6■■■□□ 17.4
LMBR1-204ENST00000415428 RNMTO43148 476 aaKnown RBP8.63□□□□□ -1.03
LMBR1-204ENST00000415428 CHRNA5P30532 468 aa8.63□□□□□ -1.03
LMBR1-204ENST00000415428 IARSP41252 1262 aaKnown RBP8.63□□□□□ -1.03
LMBR1-204ENST00000415428 TM4SF4P48230 202 aa8.63□□□□□ -1.03
LMBR1-204ENST00000415428 DPF2Q92785 391 aa8.63□□□□□ -1.03
LMBR1-204ENST00000415428 CAPNS2Q96L46 248 aa8.63□□□□□ -1.03
LMBR1-204ENST00000415428 ZNF496Q96IT1 587 aaPredicted RBP8.63□□□□□ -1.03
LMBR1-204ENST00000415428 ADARB2Q9NS39 739 aaKnown RBP8.63□□□□□ -1.03
LMBR1-204ENST00000415428 MGAMO43451 1857 aa8.62□□□□□ -1.03
LMBR1-204ENST00000415428 NOGQ13253 232 aa8.62□□□□□ -1.03
LMBR1-204ENST00000415428 CNTROBQ8N137 903 aa8.62□□□□□ -1.03
LMBR1-204ENST00000415428 ARIH1Q9Y4X5 557 aaPredicted RBP8.62□□□□□ -1.03
LMBR1-204ENST00000415428 ARMC5Q96C12 935 aa8.62□□□□□ -1.03
LMBR1-204ENST00000415428 ALPK3Q96L96 1907 aa8.62□□□□□ -1.03
LMBR1-204ENST00000415428 RPS12P25398 132 aaKnown RBP8.61□□□□□ -1.03
LMBR1-204ENST00000415428 USPL1Q5W0Q7 1092 aa8.61□□□□□ -1.03
LMBR1-204ENST00000415428 INTS3Q68E01 1043 aaKnown RBP8.61□□□□□ -1.03
LMBR1-204ENST00000415428 BABAM1Q9NWV8 329 aa8.61□□□□□ -1.03
LMBR1-204ENST00000415428 TESPA1A2RU30 521 aaPredicted RBP8.61□□□□□ -1.03
LMBR1-204ENST00000415428 PRPF40BQ6NWY9 871 aaKnown RBP8.61□□□□□ -1.03
LMBR1-204ENST00000415428 SCN9AQ15858 1988 aa8.61□□□□□ -1.03
LMBR1-204ENST00000415428 ALDH1B1P30837 517 aa8.61□□□□□ -1.03
LMBR1-204ENST00000415428 ZNF526Q8TF50 670 aaPredicted RBP8.61□□□□□ -1.03
LMBR1-204ENST00000415428 SRP68Q9UHB9 627 aaKnown RBP8.61□□□□□ -1.03
LMBR1-204ENST00000415428 CASP8AP2Q9UKL3 1982 aa8.61□□□□□ -1.03
LMBR1-204ENST00000415428 FRMPD3Q5JV73 1810 aa8.61□□□□□ -1.03
LMBR1-204ENST00000415428 MAP3K11Q16584 847 aa8.6□□□□□ -1.03
LMBR1-204ENST00000415428 CTU1Q7Z7A3 348 aaKnown RBP8.6□□□□□ -1.03
LMBR1-204ENST00000415428 CARD11Q9BXL7 1154 aa8.6□□□□□ -1.03
LMBR1-204ENST00000415428 UBE2Q1Q7Z7E8 422 aa8.6□□□□□ -1.03
LMBR1-204ENST00000415428 CCDC102AQ96A19 550 aa8.6□□□□□ -1.03
LMBR1-204ENST00000415428 CEP350Q5VT06 3117 aa8.6□□□□□ -1.03
LMBR1-204ENST00000415428 MNX1P50219 401 aaPredicted RBP8.6□□□□□ -1.03
LMBR1-204ENST00000415428 RRS1Q15050 365 aaKnown RBP8.6□□□□□ -1.03
LMBR1-204ENST00000415428 GPRC5DQ9NZD1 345 aa8.6□□□□□ -1.03
LMBR1-204ENST00000415428 ZNF280AP59817 542 aaPredicted RBP8.59□□□□□ -1.03
LMBR1-204ENST00000415428 ERFEQ4G0M1 354 aa8.59□□□□□ -1.03
LMBR1-204ENST00000415428 LRP10Q7Z4F1 713 aa8.59□□□□□ -1.03
LMBR1-204ENST00000415428 PHF14O94880 888 aa8.59□□□□□ -1.03
LMBR1-204ENST00000415428 EMILIN1Q9Y6C2 1016 aa8.59□□□□□ -1.03
LMBR1-204ENST00000415428 LOC285556D6RIA3 1793 aa8.59□□□□□ -1.03
LMBR1-204ENST00000415428 ZPR1O75312 459 aa8.59□□□□□ -1.04
LMBR1-204ENST00000415428 TBC1D9BQ66K14 1250 aa8.59□□□□□ -1.04
LMBR1-204ENST00000415428 ZCCHC17Q9NP64 241 aaKnown RBP8.59□□□□□ -1.04
LMBR1-204ENST00000415428 CABP4P57796 275 aa8.58□□□□□ -1.04
LMBR1-204ENST00000415428 SUPT20HQ8NEM7 779 aa8.58□□□□□ -1.04
LMBR1-204ENST00000415428 LTBP2Q14767 1821 aa8.58□□□□□ -1.04
LMBR1-204ENST00000415428 POTEIP0CG38 1075 aa8.58□□□□□ -1.04
LMBR1-204ENST00000415428 POTEJP0CG39 1038 aa8.58□□□□□ -1.04
LMBR1-204ENST00000415428 HABP4Q5JVS0 413 aaKnown RBP8.58□□□□□ -1.04
LMBR1-204ENST00000415428 FXR1P51114 621 aaKnown RBP eCLIP8.57□□□□□ -1.04
LMBR1-204ENST00000415428 SYTL4Q96C24 671 aaPredicted RBP8.57□□□□□ -1.04
LMBR1-204ENST00000415428 RTL9Q8NET4 1388 aa8.57□□□□□ -1.04
LMBR1-204ENST00000415428 ST5P78524 1137 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms