RNA–Protein interactions for RNA: ENST00000414672.5

RHBDD3-204, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 900 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-204ENST00000414672 TNS4Q8IZW8 715 aa28.82■■■□□ 2.2
RHBDD3-204ENST00000414672 RTF1Q92541 710 aaKnown RBP28.82■■■□□ 2.2
RHBDD3-204ENST00000414672 MASTLQ96GX5 879 aa28.82■■■□□ 2.2
RHBDD3-204ENST00000414672 NUDCQ9Y266 331 aa28.82■■■□□ 2.2
RHBDD3-204ENST00000414672 LTBP3Q9NS15 1303 aa28.81■■■□□ 2.2
RHBDD3-204ENST00000414672 SOGA3Q5TF21 947 aa28.81■■■□□ 2.2
RHBDD3-204ENST00000414672 NBPF5PQ86XG9 351 aaPredicted RBP28.81■■■□□ 2.2
RHBDD3-204ENST00000414672 RSPH6AQ9H0K4 717 aa28.81■■■□□ 2.2
RHBDD3-204ENST00000414672 DDNO94850 711 aaPredicted RBP28.79■■■□□ 2.2
RHBDD3-204ENST00000414672 ZNF652Q9Y2D9 606 aa28.79■■■□□ 2.2
RHBDD3-204ENST00000414672 SIPA1L3O60292 1781 aaPredicted RBP28.78■■■□□ 2.2
RHBDD3-204ENST00000414672 COL11A2P13942 1736 aaPredicted RBP28.78■■■□□ 2.2
RHBDD3-204ENST00000414672 PRAMEF22A3QJZ6 481 aa28.78■■■□□ 2.2
RHBDD3-204ENST00000414672 SNRPA1P09661 255 aaKnown RBP28.78■■■□□ 2.2
RHBDD3-204ENST00000414672 HSPA1AP0DMV8 641 aaKnown RBP28.78■■■□□ 2.2
RHBDD3-204ENST00000414672 HSPA1BP0DMV9 641 aaKnown RBP28.78■■■□□ 2.2
RHBDD3-204ENST00000414672 U2AF1L5P0DN76 240 aaPredicted RBP28.78■■■□□ 2.2
RHBDD3-204ENST00000414672 U2AF1Q01081 240 aaKnown RBP eCLIP28.78■■■□□ 2.2
RHBDD3-204ENST00000414672 CHADLQ6NUI6 762 aa28.78■■■□□ 2.2
RHBDD3-204ENST00000414672 MCM10Q7L590 875 aa28.78■■■□□ 2.2
RHBDD3-204ENST00000414672 CLEC4GQ6UXB4 293 aa28.77■■■□□ 2.2
RHBDD3-204ENST00000414672 PCNTO95613 3336 aa28.76■■■□□ 2.19
RHBDD3-204ENST00000414672 FER1L6Q2WGJ9 1857 aa28.74■■■□□ 2.19
RHBDD3-204ENST00000414672 FAM177BA6PVY3 158 aa28.73■■■□□ 2.19
RHBDD3-204ENST00000414672 NPR1P16066 1061 aa28.73■■■□□ 2.19
RHBDD3-204ENST00000414672 CCDC93Q567U6 631 aa28.73■■■□□ 2.19
RHBDD3-204ENST00000414672 TPTE2Q6XPS3 522 aa28.73■■■□□ 2.19
RHBDD3-204ENST00000414672 NIP7Q9Y221 180 aaKnown RBP eCLIP28.73■■■□□ 2.19
RHBDD3-204ENST00000414672 SLX4Q8IY92 1834 aa28.73■■■□□ 2.19
RHBDD3-204ENST00000414672 POTEIP0CG38 1075 aa28.72■■■□□ 2.19
RHBDD3-204ENST00000414672 POTEJP0CG39 1038 aa28.72■■■□□ 2.19
RHBDD3-204ENST00000414672 IQCA1LA6NCM1 817 aa28.71■■■□□ 2.19
RHBDD3-204ENST00000414672 DCTN1Q14203 1278 aa28.71■■■□□ 2.19
RHBDD3-204ENST00000414672 CREBZFQ9NS37 354 aa28.71■■■□□ 2.19
RHBDD3-204ENST00000414672 MKRN1Q9UHC7 482 aaKnown RBP28.71■■■□□ 2.19
RHBDD3-204ENST00000414672 C7orf43Q8WVR3 580 aa28.7■■■□□ 2.18
RHBDD3-204ENST00000414672 DICER1Q9UPY3 1922 aaKnown RBP28.7■■■□□ 2.18
RHBDD3-204ENST00000414672 NBPF26B4DH59 902 aa28.68■■■□□ 2.18
RHBDD3-204ENST00000414672 GTF2E1P29083 439 aaPredicted RBP28.68■■■□□ 2.18
RHBDD3-204ENST00000414672 PPP2R1AP30153 589 aa28.68■■■□□ 2.18
RHBDD3-204ENST00000414672 NBPF10Q6P3W6 841 aaKnown RBP28.68■■■□□ 2.18
RHBDD3-204ENST00000414672 NBPF15Q8N660 670 aa28.68■■■□□ 2.18
RHBDD3-204ENST00000414672 ZNF277Q9NRM2 450 aaPredicted RBP28.68■■■□□ 2.18
RHBDD3-204ENST00000414672 BCORQ6W2J9 1755 aa28.67■■■□□ 2.18
RHBDD3-204ENST00000414672 FKBP4Q02790 459 aaKnown RBP eCLIP28.67■■■□□ 2.18
RHBDD3-204ENST00000414672 CACNA1SQ13698 1873 aa28.66■■■□□ 2.18
RHBDD3-204ENST00000414672 HTATSF1O43719 755 aaKnown RBP28.65■■■□□ 2.18
RHBDD3-204ENST00000414672 TAF7Q15545 349 aaPredicted RBP28.65■■■□□ 2.18
RHBDD3-204ENST00000414672 OLFM4Q6UX06 510 aa28.65■■■□□ 2.18
RHBDD3-204ENST00000414672 LDHDQ86WU2 507 aa28.65■■■□□ 2.18
RHBDD3-204ENST00000414672 RTKN2Q8IZC4 609 aa28.65■■■□□ 2.18
RHBDD3-204ENST00000414672 TAF1DQ9H5J8 278 aaPredicted RBP28.65■■■□□ 2.18
RHBDD3-204ENST00000414672 MIS18AQ9NYP9 233 aa28.65■■■□□ 2.18
RHBDD3-204ENST00000414672 KLRG2A4D1S0 409 aaPredicted RBP28.64■■■□□ 2.18
RHBDD3-204ENST00000414672 EAPPQ56P03 285 aaPredicted RBP28.64■■■□□ 2.18
RHBDD3-204ENST00000414672 L3MBTL3Q96JM7 780 aaPredicted RBP28.64■■■□□ 2.18
RHBDD3-204ENST00000414672 RGL2O15211 777 aa28.63■■■□□ 2.17
RHBDD3-204ENST00000414672 ALDH1B1P30837 517 aa28.63■■■□□ 2.17
RHBDD3-204ENST00000414672 HLFQ16534 295 aa28.63■■■□□ 2.17
RHBDD3-204ENST00000414672 NGEFQ8N5V2 710 aa28.63■■■□□ 2.17
RHBDD3-204ENST00000414672 CLEC11AQ9Y240 323 aa28.63■■■□□ 2.17
RHBDD3-204ENST00000414672 NEFMP07197 916 aa28.61■■■□□ 2.17
RHBDD3-204ENST00000414672 HACL1Q9UJ83 578 aa28.61■■■□□ 2.17
RHBDD3-204ENST00000414672 ZNF541Q9H0D2 1346 aa28.61■■■□□ 2.17
RHBDD3-204ENST00000414672 ARFGEF2Q9Y6D5 1785 aa28.6■■■□□ 2.17
RHBDD3-204ENST00000414672 SYNE4Q8N205 404 aa28.59■■■□□ 2.17
RHBDD3-204ENST00000414672 IARSP41252 1262 aaKnown RBP28.58■■■□□ 2.17
RHBDD3-204ENST00000414672 PASKQ96RG2 1323 aa28.58■■■□□ 2.17
RHBDD3-204ENST00000414672 NYXQ9GZU5 481 aa28.57■■■□□ 2.16
RHBDD3-204ENST00000414672 TMEM88BA6NKF7 163 aa28.56■■■□□ 2.16
RHBDD3-204ENST00000414672 EPHX2P34913 555 aa28.56■■■□□ 2.16
RHBDD3-204ENST00000414672 CNTNAP1P78357 1384 aa28.56■■■□□ 2.16
RHBDD3-204ENST00000414672 NUTM1Q86Y26 1132 aa28.56■■■□□ 2.16
RHBDD3-204ENST00000414672 RRP7AQ9Y3A4 280 aaKnown RBP28.56■■■□□ 2.16
RHBDD3-204ENST00000414672 PNISRQ8TF01 805 aaKnown RBP28.55■■■□□ 2.16
RHBDD3-204ENST00000414672 JDP2Q8WYK2 163 aa28.55■■■□□ 2.16
RHBDD3-204ENST00000414672 RNF123Q5XPI4 1314 aa28.54■■■□□ 2.16
RHBDD3-204ENST00000414672 KIF6Q6ZMV9 814 aa28.54■■■□□ 2.16
RHBDD3-204ENST00000414672 PNMA8AQ86V59 439 aaPredicted RBP28.54■■■□□ 2.16
RHBDD3-204ENST00000414672 SCN4AP35499 1836 aa28.53■■■□□ 2.16
RHBDD3-204ENST00000414672 ITGBL1O95965 494 aaPredicted RBP28.53■■■□□ 2.16
RHBDD3-204ENST00000414672 RPGRQ92834 1020 aaKnown RBP28.53■■■□□ 2.16
RHBDD3-204ENST00000414672 ERVV-1B6SEH8 477 aa28.52■■■□□ 2.16
RHBDD3-204ENST00000414672 FZD9O00144 591 aa28.52■■■□□ 2.16
RHBDD3-204ENST00000414672 MYL6BP14649 208 aa28.52■■■□□ 2.16
RHBDD3-204ENST00000414672 AIDAQ96BJ3 306 aa28.52■■■□□ 2.16
RHBDD3-204ENST00000414672 MAP3K15Q6ZN16 1313 aa28.51■■■□□ 2.15
RHBDD3-204ENST00000414672 FOXN1O15353 648 aa28.51■■■□□ 2.15
RHBDD3-204ENST00000414672 GPTP24298 496 aa28.51■■■□□ 2.15
RHBDD3-204ENST00000414672 VEGFBP49765 207 aa28.51■■■□□ 2.15
RHBDD3-204ENST00000414672 GPC2Q8N158 579 aa28.51■■■□□ 2.15
RHBDD3-204ENST00000414672 PSMD1Q99460 953 aa28.51■■■□□ 2.15
RHBDD3-204ENST00000414672 CRY2Q49AN0 593 aa28.5■■■□□ 2.15
RHBDD3-204ENST00000414672 MAP1SQ66K74 1059 aaPredicted RBP28.5■■■□□ 2.15
RHBDD3-204ENST00000414672 TTLL7Q6ZT98 887 aa28.5■■■□□ 2.15
RHBDD3-204ENST00000414672 CNTROBQ8N137 903 aa28.5■■■□□ 2.15
RHBDD3-204ENST00000414672 ZBTB3Q9H5J0 574 aa28.5■■■□□ 2.15
RHBDD3-204ENST00000414672 GJA3Q9Y6H8 435 aa28.5■■■□□ 2.15
RHBDD3-204ENST00000414672 ABCC12Q96J65 1359 aa28.5■■■□□ 2.15
RHBDD3-204ENST00000414672 EIF6P56537 245 aaKnown RBP28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms