RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 C3P01024 1663 aa17.47■□□□□ 0.39
SEMA3F-202ENST00000413852 TTC6Q86TZ1 520 aa17.46■□□□□ 0.39
SEMA3F-202ENST00000413852 DIAPH3Q9NSV4 1193 aa17.46■□□□□ 0.39
SEMA3F-202ENST00000413852 U2AF2P26368 475 aaKnown RBP eCLIP17.46■□□□□ 0.39
SEMA3F-202ENST00000413852 TPCN1Q9ULQ1 816 aa17.46■□□□□ 0.39
SEMA3F-202ENST00000413852 CNTROBQ8N137 903 aa17.45■□□□□ 0.38
SEMA3F-202ENST00000413852 PRAMEF22A3QJZ6 481 aa17.45■□□□□ 0.38
SEMA3F-202ENST00000413852 LTKP29376 864 aa17.45■□□□□ 0.38
SEMA3F-202ENST00000413852 NDUFB9Q9Y6M9 179 aa17.45■□□□□ 0.38
SEMA3F-202ENST00000413852 SETD1AO15047 1707 aaKnown RBP17.45■□□□□ 0.38
SEMA3F-202ENST00000413852 KIF3AQ9Y496 699 aa17.45■□□□□ 0.38
SEMA3F-202ENST00000413852 NRXN3Q9Y4C0 1643 aa17.45■□□□□ 0.38
SEMA3F-202ENST00000413852 KCNJ4P48050 445 aa17.44■□□□□ 0.38
SEMA3F-202ENST00000413852 TMEM87AQ8NBN3 555 aa17.44■□□□□ 0.38
SEMA3F-202ENST00000413852 EDC3Q96F86 508 aaKnown RBP17.44■□□□□ 0.38
SEMA3F-202ENST00000413852 DDX11Q96FC9 970 aa17.44■□□□□ 0.38
SEMA3F-202ENST00000413852 CCDC8Q9H0W5 538 aaPredicted RBP17.44■□□□□ 0.38
SEMA3F-202ENST00000413852 USP6P35125 1406 aa17.44■□□□□ 0.38
SEMA3F-202ENST00000413852 MON2Q7Z3U7 1717 aa17.44■□□□□ 0.38
SEMA3F-202ENST00000413852 UVSSAQ2YD98 709 aa17.44■□□□□ 0.38
SEMA3F-202ENST00000413852 FAM184AQ8NB25 1140 aa17.44■□□□□ 0.38
SEMA3F-202ENST00000413852 KLHDC4Q8TBB5 520 aa17.44■□□□□ 0.38
SEMA3F-202ENST00000413852 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.44■□□□□ 0.38
SEMA3F-202ENST00000413852 CWF19L2Q2TBE0 894 aaKnown RBP17.43■□□□□ 0.38
SEMA3F-202ENST00000413852 KIAA1524Q8TCG1 905 aa17.43■□□□□ 0.38
SEMA3F-202ENST00000413852 SIL1Q9H173 461 aa17.43■□□□□ 0.38
SEMA3F-202ENST00000413852 TLR7Q9NYK1 1049 aaKnown RBP17.43■□□□□ 0.38
SEMA3F-202ENST00000413852 ZSCAN20P17040 1043 aaPredicted RBP17.43■□□□□ 0.38
SEMA3F-202ENST00000413852 CEBPAP49715 358 aaPredicted RBP17.43■□□□□ 0.38
SEMA3F-202ENST00000413852 CEBPZQ03701 1054 aaKnown RBP17.43■□□□□ 0.38
SEMA3F-202ENST00000413852 KIF1BPQ96EK5 621 aa17.43■□□□□ 0.38
SEMA3F-202ENST00000413852 C16orf45Q96MC5 204 aaPredicted RBP17.43■□□□□ 0.38
SEMA3F-202ENST00000413852 POLA2Q14181 598 aa17.42■□□□□ 0.38
SEMA3F-202ENST00000413852 PROSER3Q2NL68 480 aa17.42■□□□□ 0.38
SEMA3F-202ENST00000413852 LARP1BQ659C4 914 aaKnown RBP17.42■□□□□ 0.38
SEMA3F-202ENST00000413852 ESF1Q9H501 851 aaKnown RBP17.42■□□□□ 0.38
SEMA3F-202ENST00000413852 CCDC9Q9Y3X0 531 aaKnown RBP17.42■□□□□ 0.38
SEMA3F-202ENST00000413852 TUBGCP6Q96RT7 1819 aa17.42■□□□□ 0.38
SEMA3F-202ENST00000413852 CCDC186Q7Z3E2 898 aa17.42■□□□□ 0.38
SEMA3F-202ENST00000413852 DRC7Q8IY82 874 aa17.42■□□□□ 0.38
SEMA3F-202ENST00000413852 FBXW7Q969H0 707 aa17.42■□□□□ 0.38
SEMA3F-202ENST00000413852 SSH2Q76I76 1423 aa17.42■□□□□ 0.38
SEMA3F-202ENST00000413852 IGSF1Q8N6C5 1336 aa17.42■□□□□ 0.38
SEMA3F-202ENST00000413852 NRKQ7Z2Y5 1582 aa17.41■□□□□ 0.38
SEMA3F-202ENST00000413852 SPTLC3Q9NUV7 552 aa17.41■□□□□ 0.38
SEMA3F-202ENST00000413852 DACT1Q9NYF0 836 aa17.41■□□□□ 0.38
SEMA3F-202ENST00000413852 ARHGEF10O15013 1369 aa17.41■□□□□ 0.38
SEMA3F-202ENST00000413852 RAB11FIP3O75154 756 aa17.41■□□□□ 0.38
SEMA3F-202ENST00000413852 RBM8AQ9Y5S9 174 aaKnown RBP17.41■□□□□ 0.38
SEMA3F-202ENST00000413852 MRVI1Q9Y6F6 885 aa17.41■□□□□ 0.38
SEMA3F-202ENST00000413852 PLEKHG3A1L390 1219 aa17.4■□□□□ 0.38
SEMA3F-202ENST00000413852 ARID5BQ14865 1188 aa17.4■□□□□ 0.38
SEMA3F-202ENST00000413852 ANO6Q4KMQ2 910 aa17.4■□□□□ 0.38
SEMA3F-202ENST00000413852 SMAP1Q8IYB5 467 aaPredicted RBP17.4■□□□□ 0.38
SEMA3F-202ENST00000413852 CYP46A1Q9Y6A2 500 aa17.4■□□□□ 0.38
SEMA3F-202ENST00000413852 BEND3Q5T5X7 828 aa17.4■□□□□ 0.38
SEMA3F-202ENST00000413852 AACSQ86V21 672 aa17.4■□□□□ 0.38
SEMA3F-202ENST00000413852 PRIMPOLQ96LW4 560 aa17.4■□□□□ 0.38
SEMA3F-202ENST00000413852 ITSN1Q15811 1721 aa17.4■□□□□ 0.38
SEMA3F-202ENST00000413852 NMIQ13287 307 aaPredicted RBP17.4■□□□□ 0.38
SEMA3F-202ENST00000413852 BOLA2Q9H3K6 86 aa17.4■□□□□ 0.38
SEMA3F-202ENST00000413852 FLT4P35916 1363 aa17.4■□□□□ 0.38
SEMA3F-202ENST00000413852 HOXC9P31274 260 aa17.39■□□□□ 0.37
SEMA3F-202ENST00000413852 HMGN5P82970 282 aaKnown RBP17.39■□□□□ 0.37
SEMA3F-202ENST00000413852 TYRO3Q06418 890 aa17.39■□□□□ 0.37
SEMA3F-202ENST00000413852 LARP1Q6PKG0 1096 aaKnown RBP17.39■□□□□ 0.37
SEMA3F-202ENST00000413852 MPRIPQ6WCQ1 1025 aa17.39■□□□□ 0.37
SEMA3F-202ENST00000413852 ERCC4Q92889 916 aaPredicted RBP17.39■□□□□ 0.37
SEMA3F-202ENST00000413852 JAK2O60674 1132 aa17.39■□□□□ 0.37
SEMA3F-202ENST00000413852 AIMP1Q12904 312 aaKnown RBP17.39■□□□□ 0.37
SEMA3F-202ENST00000413852 DNAAF4Q8WXU2 420 aa17.39■□□□□ 0.37
SEMA3F-202ENST00000413852 LRRC2Q9BYS8 371 aa17.39■□□□□ 0.37
SEMA3F-202ENST00000413852 CREB3L3Q68CJ9 461 aa17.38■□□□□ 0.37
SEMA3F-202ENST00000413852 A0A0D9SFI3 127 aa17.38■□□□□ 0.37
SEMA3F-202ENST00000413852 PDCL2Q8N4E4 241 aa17.38■□□□□ 0.37
SEMA3F-202ENST00000413852 ZNF592Q92610 1267 aa17.38■□□□□ 0.37
SEMA3F-202ENST00000413852 CBX8Q9HC52 389 aa17.38■□□□□ 0.37
SEMA3F-202ENST00000413852 XRN1Q8IZH2 1706 aaKnown RBP17.38■□□□□ 0.37
SEMA3F-202ENST00000413852 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.38■□□□□ 0.37
SEMA3F-202ENST00000413852 TSPOAP1O95153 1857 aa17.38■□□□□ 0.37
SEMA3F-202ENST00000413852 AKAP12Q02952 1782 aa17.38■□□□□ 0.37
SEMA3F-202ENST00000413852 SETD1BQ9UPS6 1966 aaKnown RBP17.38■□□□□ 0.37
SEMA3F-202ENST00000413852 IL17RAQ96F46 866 aa17.38■□□□□ 0.37
SEMA3F-202ENST00000413852 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.38■□□□□ 0.37
SEMA3F-202ENST00000413852 V9GYY5 206 aaPredicted RBP17.38■□□□□ 0.37
SEMA3F-202ENST00000413852 IFIT2P09913 472 aaKnown RBP17.37■□□□□ 0.37
SEMA3F-202ENST00000413852 CCDC192P0DO97 292 aa17.37■□□□□ 0.37
SEMA3F-202ENST00000413852 FTOQ9C0B1 505 aaKnown RBP eCLIP17.37■□□□□ 0.37
SEMA3F-202ENST00000413852 DNAJC25Q9H1X3 360 aa17.37■□□□□ 0.37
SEMA3F-202ENST00000413852 SBNO1A3KN83 1393 aa17.37■□□□□ 0.37
SEMA3F-202ENST00000413852 USP31Q70CQ4 1352 aa17.37■□□□□ 0.37
SEMA3F-202ENST00000413852 NR1I2O75469 434 aa17.37■□□□□ 0.37
SEMA3F-202ENST00000413852 LRRC59Q96AG4 307 aaKnown RBP17.37■□□□□ 0.37
SEMA3F-202ENST00000413852 NUP62CLQ9H1M0 184 aa17.37■□□□□ 0.37
SEMA3F-202ENST00000413852 ZSWIM6Q9HCJ5 1215 aa17.37■□□□□ 0.37
SEMA3F-202ENST00000413852 AMOTL2Q9Y2J4 779 aa17.37■□□□□ 0.37
SEMA3F-202ENST00000413852 MTERF4Q7Z6M4 381 aaKnown RBP17.36■□□□□ 0.37
SEMA3F-202ENST00000413852 CLASRPQ8N2M8 674 aaKnown RBP17.36■□□□□ 0.37
SEMA3F-202ENST00000413852 C9orf78Q9NZ63 289 aaPredicted RBP17.36■□□□□ 0.37
SEMA3F-202ENST00000413852 LETM1O95202 739 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms