RNA–Protein interactions for RNA: ENST00000413819.1

TRGVA-201, Transcript of T cell receptor gamma variable A (pseudogene), humanhuman

BASIC

Gene TRGVA, Length 285 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRGVA-201ENST00000413819 FMNL2Q96PY5 1086 aa13.03□□□□□ -0.32
TRGVA-201ENST00000413819 TAF1DQ9H5J8 278 aaPredicted RBP13.03□□□□□ -0.32
TRGVA-201ENST00000413819 CCDC88AQ3V6T2 1871 aa13.03□□□□□ -0.32
TRGVA-201ENST00000413819 COL3A1P02461 1466 aaPredicted RBP13.03□□□□□ -0.32
TRGVA-201ENST00000413819 VIRMAQ69YN4 1812 aaKnown RBP13.02□□□□□ -0.32
TRGVA-201ENST00000413819 A1BGP04217 495 aa13.02□□□□□ -0.33
TRGVA-201ENST00000413819 CCDC93Q567U6 631 aa13.02□□□□□ -0.33
TRGVA-201ENST00000413819 NPM2Q86SE8 214 aaKnown RBP13.02□□□□□ -0.33
TRGVA-201ENST00000413819 DZIP3Q86Y13 1208 aaKnown RBP13.02□□□□□ -0.33
TRGVA-201ENST00000413819 CEMIPQ8WUJ3 1361 aa13.02□□□□□ -0.33
TRGVA-201ENST00000413819 ARFGEF2Q9Y6D5 1785 aa13.02□□□□□ -0.33
TRGVA-201ENST00000413819 TMEM88BA6NKF7 163 aa13.01□□□□□ -0.33
TRGVA-201ENST00000413819 ITGBL1O95965 494 aaPredicted RBP13.01□□□□□ -0.33
TRGVA-201ENST00000413819 CTCFP49711 727 aaPredicted RBP13.01□□□□□ -0.33
TRGVA-201ENST00000413819 AIDAQ96BJ3 306 aa13.01□□□□□ -0.33
TRGVA-201ENST00000413819 BCORQ6W2J9 1755 aa13.01□□□□□ -0.33
TRGVA-201ENST00000413819 SLX4Q8IY92 1834 aa13.01□□□□□ -0.33
TRGVA-201ENST00000413819 SIPA1L3O60292 1781 aaPredicted RBP13□□□□□ -0.33
TRGVA-201ENST00000413819 KIF7Q2M1P5 1343 aa13□□□□□ -0.33
TRGVA-201ENST00000413819 ZNF541Q9H0D2 1346 aa13□□□□□ -0.33
TRGVA-201ENST00000413819 KLRG2A4D1S0 409 aaPredicted RBP13□□□□□ -0.33
TRGVA-201ENST00000413819 PER1O15534 1290 aaPredicted RBP13□□□□□ -0.33
TRGVA-201ENST00000413819 VEGFBP49765 207 aa13□□□□□ -0.33
TRGVA-201ENST00000413819 FKBP4Q02790 459 aaKnown RBP eCLIP13□□□□□ -0.33
TRGVA-201ENST00000413819 CLEC4GQ6UXB4 293 aa13□□□□□ -0.33
TRGVA-201ENST00000413819 NPR1P16066 1061 aa12.99□□□□□ -0.33
TRGVA-201ENST00000413819 NBPF5PQ86XG9 351 aaPredicted RBP12.99□□□□□ -0.33
TRGVA-201ENST00000413819 WBP1LQ9NX94 342 aa12.99□□□□□ -0.33
TRGVA-201ENST00000413819 HACL1Q9UJ83 578 aa12.99□□□□□ -0.33
TRGVA-201ENST00000413819 SCN4AP35499 1836 aa12.99□□□□□ -0.33
TRGVA-201ENST00000413819 ADAMTSL1Q8N6G6 1762 aa12.99□□□□□ -0.33
TRGVA-201ENST00000413819 RASSF10A6NK89 507 aa12.98□□□□□ -0.33
TRGVA-201ENST00000413819 U2SURPO15042 1029 aaKnown RBP12.98□□□□□ -0.33
TRGVA-201ENST00000413819 RGL2O15211 777 aa12.98□□□□□ -0.33
TRGVA-201ENST00000413819 KCNQ3O43525 872 aa12.98□□□□□ -0.33
TRGVA-201ENST00000413819 EPHX2P34913 555 aa12.98□□□□□ -0.33
TRGVA-201ENST00000413819 EAPPQ56P03 285 aaPredicted RBP12.98□□□□□ -0.33
TRGVA-201ENST00000413819 CC2D1BQ5T0F9 858 aaKnown RBP12.98□□□□□ -0.33
TRGVA-201ENST00000413819 ZNF277Q9NRM2 450 aaPredicted RBP12.98□□□□□ -0.33
TRGVA-201ENST00000413819 ZNF652Q9Y2D9 606 aa12.98□□□□□ -0.33
TRGVA-201ENST00000413819 NPC1L1Q9UHC9 1359 aa12.97□□□□□ -0.33
TRGVA-201ENST00000413819 PCNTO95613 3336 aa12.97□□□□□ -0.33
TRGVA-201ENST00000413819 BTBD11A6QL63 1104 aa12.97□□□□□ -0.33
TRGVA-201ENST00000413819 PNMA8AQ86V59 439 aaPredicted RBP12.97□□□□□ -0.33
TRGVA-201ENST00000413819 RTKN2Q8IZC4 609 aa12.97□□□□□ -0.33
TRGVA-201ENST00000413819 PCGF6Q9BYE7 350 aa12.97□□□□□ -0.33
TRGVA-201ENST00000413819 USP16Q9Y5T5 823 aa12.97□□□□□ -0.33
TRGVA-201ENST00000413819 FZD9O00144 591 aa12.96□□□□□ -0.33
TRGVA-201ENST00000413819 PIP4K2AP48426 406 aaPredicted RBP12.96□□□□□ -0.33
TRGVA-201ENST00000413819 LBX1P52954 281 aa12.96□□□□□ -0.33
TRGVA-201ENST00000413819 OLFM4Q6UX06 510 aa12.96□□□□□ -0.33
TRGVA-201ENST00000413819 TPTE2Q6XPS3 522 aa12.96□□□□□ -0.33
TRGVA-201ENST00000413819 CLEC11AQ9Y240 323 aa12.96□□□□□ -0.33
TRGVA-201ENST00000413819 SNED1Q8TER0 1413 aa12.96□□□□□ -0.34
TRGVA-201ENST00000413819 RNF123Q5XPI4 1314 aa12.95□□□□□ -0.34
TRGVA-201ENST00000413819 PRAMEF22A3QJZ6 481 aa12.95□□□□□ -0.34
TRGVA-201ENST00000413819 IARSP41252 1262 aaKnown RBP12.95□□□□□ -0.34
TRGVA-201ENST00000413819 DEFB115Q30KQ5 88 aa12.95□□□□□ -0.34
TRGVA-201ENST00000413819 CNTROBQ8N137 903 aa12.95□□□□□ -0.34
TRGVA-201ENST00000413819 GPC2Q8N158 579 aa12.95□□□□□ -0.34
TRGVA-201ENST00000413819 PHACTR3Q96KR7 559 aa12.95□□□□□ -0.34
TRGVA-201ENST00000413819 CACNA1SQ13698 1873 aa12.94□□□□□ -0.34
TRGVA-201ENST00000413819 SNRPA1P09661 255 aaKnown RBP12.94□□□□□ -0.34
TRGVA-201ENST00000413819 HSPA8P11142 646 aaKnown RBP12.94□□□□□ -0.34
TRGVA-201ENST00000413819 ALDH1B1P30837 517 aa12.94□□□□□ -0.34
TRGVA-201ENST00000413819 MAP1SQ66K74 1059 aaPredicted RBP12.94□□□□□ -0.34
TRGVA-201ENST00000413819 NIP7Q9Y221 180 aaKnown RBP eCLIP12.94□□□□□ -0.34
TRGVA-201ENST00000413819 WDR33Q9C0J8 1336 aaKnown RBP12.93□□□□□ -0.34
TRGVA-201ENST00000413819 NBPF26B4DH59 902 aa12.93□□□□□ -0.34
TRGVA-201ENST00000413819 PRKAR2BP31323 418 aa12.93□□□□□ -0.34
TRGVA-201ENST00000413819 MAP2K1Q02750 393 aaPredicted RBP12.93□□□□□ -0.34
TRGVA-201ENST00000413819 NBPF10Q6P3W6 841 aaKnown RBP12.93□□□□□ -0.34
TRGVA-201ENST00000413819 SYNE4Q8N205 404 aa12.93□□□□□ -0.34
TRGVA-201ENST00000413819 NBPF15Q8N660 670 aa12.93□□□□□ -0.34
TRGVA-201ENST00000413819 ABHD8Q96I13 439 aa12.93□□□□□ -0.34
TRGVA-201ENST00000413819 PSMD1Q99460 953 aa12.93□□□□□ -0.34
TRGVA-201ENST00000413819 RSPH6AQ9H0K4 717 aa12.93□□□□□ -0.34
TRGVA-201ENST00000413819 THSD7BQ9C0I4 1608 aa12.92□□□□□ -0.34
TRGVA-201ENST00000413819 SLC34A2O95436 690 aa12.92□□□□□ -0.34
TRGVA-201ENST00000413819 CRY2Q49AN0 593 aa12.92□□□□□ -0.34
TRGVA-201ENST00000413819 DDX21Q9NR30 783 aaKnown RBP eCLIP12.92□□□□□ -0.34
TRGVA-201ENST00000413819 ABT1Q9ULW3 272 aaKnown RBP12.92□□□□□ -0.34
TRGVA-201ENST00000413819 CC2D2BQ6DHV5 1058 aa12.91□□□□□ -0.34
TRGVA-201ENST00000413819 JDP2Q8WYK2 163 aa12.91□□□□□ -0.34
TRGVA-201ENST00000413819 COL4A5P29400 1685 aa12.9□□□□□ -0.34
TRGVA-201ENST00000413819 FAM177BA6PVY3 158 aa12.9□□□□□ -0.34
TRGVA-201ENST00000413819 HLFQ16534 295 aa12.9□□□□□ -0.34
TRGVA-201ENST00000413819 MCM10Q7L590 875 aa12.9□□□□□ -0.34
TRGVA-201ENST00000413819 ABCC12Q96J65 1359 aa12.9□□□□□ -0.34
TRGVA-201ENST00000413819 RIC1Q4ADV7 1423 aa12.89□□□□□ -0.35
TRGVA-201ENST00000413819 GTF2E1P29083 439 aaPredicted RBP12.89□□□□□ -0.35
TRGVA-201ENST00000413819 LMOD1P29536 600 aaPredicted RBP12.89□□□□□ -0.35
TRGVA-201ENST00000413819 SCNN1DP51172 638 aa12.89□□□□□ -0.35
TRGVA-201ENST00000413819 EIF6P56537 245 aaKnown RBP12.89□□□□□ -0.35
TRGVA-201ENST00000413819 GRIPAP1Q4V328 841 aa12.89□□□□□ -0.35
TRGVA-201ENST00000413819 RTF1Q92541 710 aaKnown RBP12.89□□□□□ -0.35
TRGVA-201ENST00000413819 CFAP53Q96M91 514 aa12.89□□□□□ -0.35
TRGVA-201ENST00000413819 NYXQ9GZU5 481 aa12.89□□□□□ -0.35
TRGVA-201ENST00000413819 LTBP1Q14766 1721 aa12.88□□□□□ -0.35
TRGVA-201ENST00000413819 HTATSF1O43719 755 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms