RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 SOS1Q07889 1333 aaPredicted RBP11.24□□□□□ -0.61
UPF3AP1-201ENST00000413731 COL15A1P39059 1388 aa11.24□□□□□ -0.61
UPF3AP1-201ENST00000413731 SIPA1L3O60292 1781 aaPredicted RBP11.23□□□□□ -0.61
UPF3AP1-201ENST00000413731 PSEN1P49768 467 aa11.23□□□□□ -0.61
UPF3AP1-201ENST00000413731 FSTL1Q12841 308 aa11.23□□□□□ -0.61
UPF3AP1-201ENST00000413731 E2F4Q16254 413 aa11.23□□□□□ -0.61
UPF3AP1-201ENST00000413731 USPL1Q5W0Q7 1092 aa11.23□□□□□ -0.61
UPF3AP1-201ENST00000413731 SULT6B1Q6IMI4 303 aa11.23□□□□□ -0.61
UPF3AP1-201ENST00000413731 JMYQ8N9B5 988 aa11.23□□□□□ -0.61
UPF3AP1-201ENST00000413731 PANK3Q9H999 370 aa11.23□□□□□ -0.61
UPF3AP1-201ENST00000413731 RRAGCQ9HB90 399 aa11.23□□□□□ -0.61
UPF3AP1-201ENST00000413731 DAXXQ9UER7 740 aaPredicted RBP11.23□□□□□ -0.61
UPF3AP1-201ENST00000413731 CARMIL3Q8ND23 1372 aa11.23□□□□□ -0.61
UPF3AP1-201ENST00000413731 ARFGEF2Q9Y6D5 1785 aa11.23□□□□□ -0.61
UPF3AP1-201ENST00000413731 PITPNM1O00562 1244 aa11.22□□□□□ -0.61
UPF3AP1-201ENST00000413731 PRELPP51888 382 aa11.22□□□□□ -0.61
UPF3AP1-201ENST00000413731 COL13A1Q5TAT6 717 aaPredicted RBP11.22□□□□□ -0.61
UPF3AP1-201ENST00000413731 BCORQ6W2J9 1755 aa11.22□□□□□ -0.61
UPF3AP1-201ENST00000413731 TM4SF1P30408 202 aa11.21□□□□□ -0.61
UPF3AP1-201ENST00000413731 IL13P35225 146 aa11.21□□□□□ -0.61
UPF3AP1-201ENST00000413731 SLC39A6Q13433 755 aa11.21□□□□□ -0.61
UPF3AP1-201ENST00000413731 NFIXQ14938 502 aa11.21□□□□□ -0.61
UPF3AP1-201ENST00000413731 SLC24A3Q9HC58 644 aa11.21□□□□□ -0.61
UPF3AP1-201ENST00000413731 ZBTB1Q9Y2K1 713 aa11.21□□□□□ -0.61
UPF3AP1-201ENST00000413731 KIF7Q2M1P5 1343 aa11.2□□□□□ -0.62
UPF3AP1-201ENST00000413731 ZPR1O75312 459 aa11.2□□□□□ -0.62
UPF3AP1-201ENST00000413731 MORC1Q86VD1 984 aa11.2□□□□□ -0.62
UPF3AP1-201ENST00000413731 SMC1BQ8NDV3 1235 aa11.2□□□□□ -0.62
UPF3AP1-201ENST00000413731 SLC52A2Q9HAB3 445 aa11.2□□□□□ -0.62
UPF3AP1-201ENST00000413731 ZC3H4Q9UPT8 1303 aaKnown RBP11.19□□□□□ -0.62
UPF3AP1-201ENST00000413731 CYP19A1P11511 503 aaPredicted RBP11.19□□□□□ -0.62
UPF3AP1-201ENST00000413731 AKAP4Q5JQC9 854 aa11.19□□□□□ -0.62
UPF3AP1-201ENST00000413731 BCL2L12Q9HB09 334 aa11.19□□□□□ -0.62
UPF3AP1-201ENST00000413731 LGR6Q9HBX8 967 aa11.19□□□□□ -0.62
UPF3AP1-201ENST00000413731 PCNTO95613 3336 aa11.19□□□□□ -0.62
UPF3AP1-201ENST00000413731 SLX4Q8IY92 1834 aa11.19□□□□□ -0.62
UPF3AP1-201ENST00000413731 SEMA3EO15041 775 aa11.18□□□□□ -0.62
UPF3AP1-201ENST00000413731 RNMTO43148 476 aaKnown RBP11.18□□□□□ -0.62
UPF3AP1-201ENST00000413731 CHADLQ6NUI6 762 aa11.18□□□□□ -0.62
UPF3AP1-201ENST00000413731 NARFQ9UHQ1 456 aa11.18□□□□□ -0.62
UPF3AP1-201ENST00000413731 NFKBIEO00221 500 aa11.17□□□□□ -0.62
UPF3AP1-201ENST00000413731 LMNB1P20700 586 aa11.17□□□□□ -0.62
UPF3AP1-201ENST00000413731 GLTPD2A6NH11 291 aa11.16□□□□□ -0.62
UPF3AP1-201ENST00000413731 PPP1R37O75864 691 aa11.16□□□□□ -0.62
UPF3AP1-201ENST00000413731 SERPINB2P05120 415 aa11.16□□□□□ -0.62
UPF3AP1-201ENST00000413731 HMOX1P09601 288 aa11.16□□□□□ -0.62
UPF3AP1-201ENST00000413731 C2CD5Q86YS7 1000 aa11.16□□□□□ -0.62
UPF3AP1-201ENST00000413731 TNS4Q8IZW8 715 aa11.16□□□□□ -0.62
UPF3AP1-201ENST00000413731 ZNF579Q8NAF0 562 aaKnown RBP11.16□□□□□ -0.62
UPF3AP1-201ENST00000413731 COL3A1P02461 1466 aaPredicted RBP11.16□□□□□ -0.62
UPF3AP1-201ENST00000413731 TESPA1A2RU30 521 aaPredicted RBP11.15□□□□□ -0.62
UPF3AP1-201ENST00000413731 HSPA1AP0DMV8 641 aaKnown RBP11.15□□□□□ -0.62
UPF3AP1-201ENST00000413731 HSPA1BP0DMV9 641 aaKnown RBP11.15□□□□□ -0.62
UPF3AP1-201ENST00000413731 BICDL1Q6ZP65 573 aa11.15□□□□□ -0.62
UPF3AP1-201ENST00000413731 TTLL6Q8N841 843 aa11.15□□□□□ -0.62
UPF3AP1-201ENST00000413731 VEGFAP15692 232 aaPredicted RBP11.14□□□□□ -0.63
UPF3AP1-201ENST00000413731 CANXP27824 592 aaKnown RBP11.14□□□□□ -0.63
UPF3AP1-201ENST00000413731 ZEB1P37275 1124 aaPredicted RBP11.14□□□□□ -0.63
UPF3AP1-201ENST00000413731 MTHFSDQ2M296 383 aaKnown RBP11.14□□□□□ -0.63
UPF3AP1-201ENST00000413731 SMYD5Q6GMV2 418 aa11.14□□□□□ -0.63
UPF3AP1-201ENST00000413731 KNSTRNQ9Y448 316 aa11.14□□□□□ -0.63
UPF3AP1-201ENST00000413731 POTECB2RU33 542 aa11.13□□□□□ -0.63
UPF3AP1-201ENST00000413731 TBC1D9BQ66K14 1250 aa11.13□□□□□ -0.63
UPF3AP1-201ENST00000413731 CCDC24Q8N4L8 307 aa11.13□□□□□ -0.63
UPF3AP1-201ENST00000413731 SCN4AP35499 1836 aa11.13□□□□□ -0.63
UPF3AP1-201ENST00000413731 H0YIN7 160 aa11.12□□□□□ -0.63
UPF3AP1-201ENST00000413731 EIF5P55010 431 aaKnown RBP11.12□□□□□ -0.63
UPF3AP1-201ENST00000413731 EFCAB3Q8N7B9 438 aa11.12□□□□□ -0.63
UPF3AP1-201ENST00000413731 FARP1Q9Y4F1 1045 aaPredicted RBP11.12□□□□□ -0.63
UPF3AP1-201ENST00000413731 C21orf2O43822 256 aa11.11□□□□□ -0.63
UPF3AP1-201ENST00000413731 PRR5LQ6MZQ0 368 aa11.11□□□□□ -0.63
UPF3AP1-201ENST00000413731 ZNF622Q969S3 477 aaKnown RBP eCLIP11.11□□□□□ -0.63
UPF3AP1-201ENST00000413731 ZNF330Q9Y3S2 320 aaPredicted RBP11.11□□□□□ -0.63
UPF3AP1-201ENST00000413731 HEG1Q9ULI3 1381 aa11.11□□□□□ -0.63
UPF3AP1-201ENST00000413731 LAMB4A4D0S4 1761 aa11.11□□□□□ -0.63
UPF3AP1-201ENST00000413731 ADAMTSL1Q8N6G6 1762 aa11.11□□□□□ -0.63
UPF3AP1-201ENST00000413731 POTEIP0CG38 1075 aa11.1□□□□□ -0.63
UPF3AP1-201ENST00000413731 POTEJP0CG39 1038 aa11.1□□□□□ -0.63
UPF3AP1-201ENST00000413731 ERFEQ4G0M1 354 aa11.1□□□□□ -0.63
UPF3AP1-201ENST00000413731 TTC5Q8N0Z6 440 aa11.1□□□□□ -0.63
UPF3AP1-201ENST00000413731 ZNF496Q96IT1 587 aaPredicted RBP11.1□□□□□ -0.63
UPF3AP1-201ENST00000413731 TBC1D2BQ9UPU7 963 aa11.1□□□□□ -0.63
UPF3AP1-201ENST00000413731 A0A087WZG4 1122 aa11.09□□□□□ -0.63
UPF3AP1-201ENST00000413731 DIAPH1O60610 1272 aaKnown RBP11.09□□□□□ -0.63
UPF3AP1-201ENST00000413731 STARD3NLO95772 234 aa11.09□□□□□ -0.63
UPF3AP1-201ENST00000413731 TAOK3Q9H2K8 898 aa11.09□□□□□ -0.63
UPF3AP1-201ENST00000413731 LTBP3Q9NS15 1303 aa11.09□□□□□ -0.63
UPF3AP1-201ENST00000413731 PDE6BP35913 854 aa11.08□□□□□ -0.64
UPF3AP1-201ENST00000413731 PRPF40BQ6NWY9 871 aaKnown RBP11.08□□□□□ -0.64
UPF3AP1-201ENST00000413731 ZNF790Q6PG37 636 aa11.08□□□□□ -0.64
UPF3AP1-201ENST00000413731 CNBD1Q8NA66 436 aa11.08□□□□□ -0.64
UPF3AP1-201ENST00000413731 FBXO22Q8NEZ5 403 aa11.08□□□□□ -0.64
UPF3AP1-201ENST00000413731 LARP6Q9BRS8 491 aaKnown RBP11.08□□□□□ -0.64
UPF3AP1-201ENST00000413731 BRIP1Q9BX63 1249 aa11.08□□□□□ -0.64
UPF3AP1-201ENST00000413731 MKRN1Q9UHC7 482 aaKnown RBP11.08□□□□□ -0.64
UPF3AP1-201ENST00000413731 DDNO94850 711 aaPredicted RBP11.07□□□□□ -0.64
UPF3AP1-201ENST00000413731 CAMTA2O94983 1202 aa11.07□□□□□ -0.64
UPF3AP1-201ENST00000413731 CNGB1Q14028 1251 aaPredicted RBP11.07□□□□□ -0.64
UPF3AP1-201ENST00000413731 CC2D1BQ5T0F9 858 aaKnown RBP11.07□□□□□ -0.64
UPF3AP1-201ENST00000413731 DPY19L2Q6NUT2 758 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms