RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 GIMAP6Q6P9H5 292 aa21.07■□□□□ 0.96
SDCBP-202ENST00000413219 KIAA1524Q8TCG1 905 aa21.07■□□□□ 0.96
SDCBP-202ENST00000413219 KIF3AQ9Y496 699 aa21.07■□□□□ 0.96
SDCBP-202ENST00000413219 CYP46A1Q9Y6A2 500 aa21.07■□□□□ 0.96
SDCBP-202ENST00000413219 GOLGA6L6A8MZA4 724 aa21.06■□□□□ 0.96
SDCBP-202ENST00000413219 LARGE1O95461 756 aa21.06■□□□□ 0.96
SDCBP-202ENST00000413219 HOXC9P31274 260 aa21.06■□□□□ 0.96
SDCBP-202ENST00000413219 MTX1Q13505 466 aa21.06■□□□□ 0.96
SDCBP-202ENST00000413219 BEND3Q5T5X7 828 aa21.06■□□□□ 0.96
SDCBP-202ENST00000413219 CCDC83Q8IWF9 413 aa21.06■□□□□ 0.96
SDCBP-202ENST00000413219 SPG7Q9UQ90 795 aa21.06■□□□□ 0.96
SDCBP-202ENST00000413219 CCDC192P0DO97 292 aa21.06■□□□□ 0.96
SDCBP-202ENST00000413219 DNM1Q05193 864 aaKnown RBP21.06■□□□□ 0.96
SDCBP-202ENST00000413219 ZNF710Q8N1W2 664 aa21.06■□□□□ 0.96
SDCBP-202ENST00000413219 NGDNQ8NEJ9 315 aaKnown RBP21.06■□□□□ 0.96
SDCBP-202ENST00000413219 USP54Q70EL1 1684 aa21.05■□□□□ 0.96
SDCBP-202ENST00000413219 MPNDQ8N594 471 aa21.05■□□□□ 0.96
SDCBP-202ENST00000413219 DNAAF4Q8WXU2 420 aa21.05■□□□□ 0.96
SDCBP-202ENST00000413219 CEMIPQ8WUJ3 1361 aa21.05■□□□□ 0.96
SDCBP-202ENST00000413219 NBPF7P0C2Y1 421 aaPredicted RBP21.05■□□□□ 0.96
SDCBP-202ENST00000413219 JAKMIP1Q96N16 626 aaKnown RBP21.05■□□□□ 0.96
SDCBP-202ENST00000413219 CCDC171Q6TFL3 1326 aa21.04■□□□□ 0.96
SDCBP-202ENST00000413219 MED1Q15648 1581 aaPredicted RBP21.04■□□□□ 0.96
SDCBP-202ENST00000413219 GPATCH3Q96I76 525 aa21.04■□□□□ 0.96
SDCBP-202ENST00000413219 CHD2O14647 1828 aaKnown RBP21.04■□□□□ 0.96
SDCBP-202ENST00000413219 ELP1O95163 1332 aa21.04■□□□□ 0.96
SDCBP-202ENST00000413219 LARP6Q9BRS8 491 aaKnown RBP21.03■□□□□ 0.96
SDCBP-202ENST00000413219 TSPOAP1O95153 1857 aa21.03■□□□□ 0.96
SDCBP-202ENST00000413219 AP5Z1O43299 807 aa21.03■□□□□ 0.96
SDCBP-202ENST00000413219 PTH1RQ03431 593 aa21.03■□□□□ 0.96
SDCBP-202ENST00000413219 CLASRPQ8N2M8 674 aaKnown RBP21.03■□□□□ 0.96
SDCBP-202ENST00000413219 ECHDC1Q9NTX5 307 aa21.03■□□□□ 0.96
SDCBP-202ENST00000413219 DIP2AQ14689 1571 aa21.03■□□□□ 0.96
SDCBP-202ENST00000413219 CPA1P15085 419 aa21.02■□□□□ 0.96
SDCBP-202ENST00000413219 NECTIN1Q15223 517 aa21.02■□□□□ 0.96
SDCBP-202ENST00000413219 C17orf53Q8N3J3 647 aaPredicted RBP21.02■□□□□ 0.96
SDCBP-202ENST00000413219 KCNF1Q9H3M0 494 aa21.02■□□□□ 0.96
SDCBP-202ENST00000413219 ZKSCAN1P17029 563 aaPredicted RBP21.01■□□□□ 0.95
SDCBP-202ENST00000413219 EIF4A1P60842 406 aaKnown RBP21.01■□□□□ 0.95
SDCBP-202ENST00000413219 KRT85P78386 507 aa21.01■□□□□ 0.95
SDCBP-202ENST00000413219 CHAF1AQ13111 956 aaPredicted RBP21.01■□□□□ 0.95
SDCBP-202ENST00000413219 PRPF40BQ6NWY9 871 aaKnown RBP21.01■□□□□ 0.95
SDCBP-202ENST00000413219 ERC1Q8IUD2 1116 aa21.01■□□□□ 0.95
SDCBP-202ENST00000413219 FAM200AQ8TCP9 573 aa21.01■□□□□ 0.95
SDCBP-202ENST00000413219 LTKP29376 864 aa21.01■□□□□ 0.95
SDCBP-202ENST00000413219 NLRP6P59044 892 aa21.01■□□□□ 0.95
SDCBP-202ENST00000413219 ST3GAL1Q11201 340 aa21.01■□□□□ 0.95
SDCBP-202ENST00000413219 OS9Q13438 667 aaPredicted RBP21.01■□□□□ 0.95
SDCBP-202ENST00000413219 ADCK5Q3MIX3 580 aa21.01■□□□□ 0.95
SDCBP-202ENST00000413219 EVI5LQ96CN4 794 aa21.01■□□□□ 0.95
SDCBP-202ENST00000413219 HIP1O00291 1037 aa21■□□□□ 0.95
SDCBP-202ENST00000413219 PDCP20941 246 aa21■□□□□ 0.95
SDCBP-202ENST00000413219 HDAC5Q9UQL6 1122 aa21■□□□□ 0.95
SDCBP-202ENST00000413219 VPS37CA5D8V6 355 aaPredicted RBP21■□□□□ 0.95
SDCBP-202ENST00000413219 PLCB2Q00722 1185 aa21■□□□□ 0.95
SDCBP-202ENST00000413219 MAP3K11Q16584 847 aa21■□□□□ 0.95
SDCBP-202ENST00000413219 ME3Q16798 604 aa21■□□□□ 0.95
SDCBP-202ENST00000413219 UTP14CQ5TAP6 766 aaKnown RBP21■□□□□ 0.95
SDCBP-202ENST00000413219 ADGRL3Q9HAR2 1447 aa21■□□□□ 0.95
SDCBP-202ENST00000413219 MARF1Q9Y4F3 1742 aaKnown RBP20.99■□□□□ 0.95
SDCBP-202ENST00000413219 ANKARQ7Z5J8 1434 aa20.99■□□□□ 0.95
SDCBP-202ENST00000413219 PI4KAP2A4QPH2 592 aa20.99■□□□□ 0.95
SDCBP-202ENST00000413219 PI4KAP1Q8N8J0 262 aa20.99■□□□□ 0.95
SDCBP-202ENST00000413219 SNRKQ9NRH2 765 aa20.99■□□□□ 0.95
SDCBP-202ENST00000413219 PYCARDQ9ULZ3 195 aa20.99■□□□□ 0.95
SDCBP-202ENST00000413219 KDM3BQ7LBC6 1761 aa20.99■□□□□ 0.95
SDCBP-202ENST00000413219 PSMA5P28066 241 aa20.98■□□□□ 0.95
SDCBP-202ENST00000413219 NUP62CLQ9H1M0 184 aa20.98■□□□□ 0.95
SDCBP-202ENST00000413219 ALDH8A1Q9H2A2 487 aaPredicted RBP20.98■□□□□ 0.95
SDCBP-202ENST00000413219 CHPF2Q9P2E5 772 aa20.98■□□□□ 0.95
SDCBP-202ENST00000413219 TPRNQ4KMQ1 711 aa20.98■□□□□ 0.95
SDCBP-202ENST00000413219 TTC6Q86TZ1 520 aa20.98■□□□□ 0.95
SDCBP-202ENST00000413219 BCL2L12Q9HB09 334 aa20.98■□□□□ 0.95
SDCBP-202ENST00000413219 AMOTL2Q9Y2J4 779 aa20.98■□□□□ 0.95
SDCBP-202ENST00000413219 ADCY9O60503 1353 aa20.97■□□□□ 0.95
SDCBP-202ENST00000413219 ALDH1L1O75891 902 aa20.97■□□□□ 0.95
SDCBP-202ENST00000413219 EIF2S2P20042 333 aaKnown RBP20.97■□□□□ 0.95
SDCBP-202ENST00000413219 ANKRD1Q15327 319 aa20.97■□□□□ 0.95
SDCBP-202ENST00000413219 LARP1BQ659C4 914 aaKnown RBP20.97■□□□□ 0.95
SDCBP-202ENST00000413219 CREB3L3Q68CJ9 461 aa20.97■□□□□ 0.95
SDCBP-202ENST00000413219 MAP4K1Q92918 833 aa20.97■□□□□ 0.95
SDCBP-202ENST00000413219 ZBTB7CA1YPR0 619 aa20.97■□□□□ 0.95
SDCBP-202ENST00000413219 IFIT2P09913 472 aaKnown RBP20.97■□□□□ 0.95
SDCBP-202ENST00000413219 TSC1Q92574 1164 aa20.97■□□□□ 0.95
SDCBP-202ENST00000413219 RBM8AQ9Y5S9 174 aaKnown RBP20.97■□□□□ 0.95
SDCBP-202ENST00000413219 TYRO3Q06418 890 aa20.96■□□□□ 0.95
SDCBP-202ENST00000413219 JARID2Q92833 1246 aaPredicted RBP20.96■□□□□ 0.95
SDCBP-202ENST00000413219 SCAND2PQ9GZW5 306 aaPredicted RBP20.96■□□□□ 0.95
SDCBP-202ENST00000413219 TPCN1Q9ULQ1 816 aa20.96■□□□□ 0.95
SDCBP-202ENST00000413219 MRVI1Q9Y6F6 885 aa20.96■□□□□ 0.95
SDCBP-202ENST00000413219 DMTNQ08495 405 aa20.95■□□□□ 0.94
SDCBP-202ENST00000413219 ARID3AQ99856 593 aa20.95■□□□□ 0.94
SDCBP-202ENST00000413219 DDX19AQ9NUU7 478 aaKnown RBP20.95■□□□□ 0.94
SDCBP-202ENST00000413219 TBX22Q9Y458 520 aa20.95■□□□□ 0.94
SDCBP-202ENST00000413219 RGPD8O14715 1765 aaPredicted RBP20.95■□□□□ 0.94
SDCBP-202ENST00000413219 CTIFO43310 598 aaKnown RBP20.95■□□□□ 0.94
SDCBP-202ENST00000413219 CYB5RLQ6IPT4 315 aa20.95■□□□□ 0.94
SDCBP-202ENST00000413219 RBM43Q6ZSC3 357 aaKnown RBP20.95■□□□□ 0.94
SDCBP-202ENST00000413219 NECAB1Q8N987 351 aa20.94■□□□□ 0.94
SDCBP-202ENST00000413219 ANKRD7Q92527 254 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms