RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 IL25Q9H293 177 aa13.92□□□□□ -0.18
TRAFD1-202ENST00000412615 ECHDC1Q9NTX5 307 aa13.92□□□□□ -0.18
TRAFD1-202ENST00000412615 ZDHHC9Q9Y397 364 aa13.92□□□□□ -0.18
TRAFD1-202ENST00000412615 PLEKHG2Q9H7P9 1386 aa13.92□□□□□ -0.18
TRAFD1-202ENST00000412615 RGPD5Q99666 1765 aa13.92□□□□□ -0.18
TRAFD1-202ENST00000412615 RAD50Q92878 1312 aa13.92□□□□□ -0.18
TRAFD1-202ENST00000412615 NEXNQ0ZGT2 675 aa13.92□□□□□ -0.18
TRAFD1-202ENST00000412615 CADPS2Q86UW7 1296 aa13.92□□□□□ -0.18
TRAFD1-202ENST00000412615 RUFY2Q8WXA3 655 aa13.91□□□□□ -0.18
TRAFD1-202ENST00000412615 LMBRD1Q9NUN5 540 aa13.91□□□□□ -0.18
TRAFD1-202ENST00000412615 KDM6AO15550 1401 aaPredicted RBP13.91□□□□□ -0.18
TRAFD1-202ENST00000412615 DDX17Q92841 729 aaKnown RBP13.91□□□□□ -0.18
TRAFD1-202ENST00000412615 SUCLG2Q96I99 432 aa13.91□□□□□ -0.18
TRAFD1-202ENST00000412615 PA2G4Q9UQ80 394 aaKnown RBP13.91□□□□□ -0.18
TRAFD1-202ENST00000412615 G3BP1Q13283 466 aaKnown RBP eCLIP13.9□□□□□ -0.18
TRAFD1-202ENST00000412615 GAS2L3Q86XJ1 694 aa13.9□□□□□ -0.18
TRAFD1-202ENST00000412615 DCAF5Q96JK2 942 aa13.9□□□□□ -0.18
TRAFD1-202ENST00000412615 UPF3BQ9BZI7 483 aaKnown RBP13.9□□□□□ -0.18
TRAFD1-202ENST00000412615 ABCC6O95255 1503 aa13.9□□□□□ -0.18
TRAFD1-202ENST00000412615 CWC27Q6UX04 472 aaKnown RBP13.9□□□□□ -0.18
TRAFD1-202ENST00000412615 LSG1Q9H089 658 aaKnown RBP13.9□□□□□ -0.18
TRAFD1-202ENST00000412615 BICC1Q9H694 974 aaKnown RBP13.9□□□□□ -0.18
TRAFD1-202ENST00000412615 DIAPH3Q9NSV4 1193 aa13.9□□□□□ -0.18
TRAFD1-202ENST00000412615 MYL6BP14649 208 aa13.89□□□□□ -0.19
TRAFD1-202ENST00000412615 TTC5Q8N0Z6 440 aa13.89□□□□□ -0.19
TRAFD1-202ENST00000412615 KAZALD1Q96I82 304 aa13.89□□□□□ -0.19
TRAFD1-202ENST00000412615 AK9Q5TCS8 1911 aa13.89□□□□□ -0.19
TRAFD1-202ENST00000412615 IGKV5-2P06315 115 aa13.89□□□□□ -0.19
TRAFD1-202ENST00000412615 SNRPA1P09661 255 aaKnown RBP13.89□□□□□ -0.19
TRAFD1-202ENST00000412615 AACSQ86V21 672 aa13.89□□□□□ -0.19
TRAFD1-202ENST00000412615 XAGE3Q8WTP9 111 aa13.89□□□□□ -0.19
TRAFD1-202ENST00000412615 MEGF6O75095 1541 aa13.89□□□□□ -0.19
TRAFD1-202ENST00000412615 COPS6Q7L5N1 327 aa13.88□□□□□ -0.19
TRAFD1-202ENST00000412615 CABLES1Q8TDN4 633 aa13.88□□□□□ -0.19
TRAFD1-202ENST00000412615 EVI5LQ96CN4 794 aa13.88□□□□□ -0.19
TRAFD1-202ENST00000412615 ZNF496Q96IT1 587 aaPredicted RBP13.88□□□□□ -0.19
TRAFD1-202ENST00000412615 METTL22Q9BUU2 404 aaPredicted RBP13.88□□□□□ -0.19
TRAFD1-202ENST00000412615 SCN11AQ9UI33 1791 aa13.88□□□□□ -0.19
TRAFD1-202ENST00000412615 TNS3Q68CZ2 1445 aa13.88□□□□□ -0.19
TRAFD1-202ENST00000412615 NEURL1BA8MQ27 555 aa13.88□□□□□ -0.19
TRAFD1-202ENST00000412615 PRPF40AO75400 957 aaKnown RBP13.88□□□□□ -0.19
TRAFD1-202ENST00000412615 BRD1O95696 1058 aa13.88□□□□□ -0.19
TRAFD1-202ENST00000412615 NOL8Q76FK4 1167 aaKnown RBP13.88□□□□□ -0.19
TRAFD1-202ENST00000412615 SNX14Q9Y5W7 946 aa13.88□□□□□ -0.19
TRAFD1-202ENST00000412615 SASH1O94885 1247 aa13.87□□□□□ -0.19
TRAFD1-202ENST00000412615 NCLP19338 710 aaKnown RBP13.87□□□□□ -0.19
TRAFD1-202ENST00000412615 GCKRQ14397 625 aa13.87□□□□□ -0.19
TRAFD1-202ENST00000412615 FMNL2Q96PY5 1086 aa13.87□□□□□ -0.19
TRAFD1-202ENST00000412615 CHRNA2Q15822 529 aa13.87□□□□□ -0.19
TRAFD1-202ENST00000412615 ANKRD13DQ6ZTN6 518 aa13.87□□□□□ -0.19
TRAFD1-202ENST00000412615 SPATA31A3Q5VYP0 1347 aa13.87□□□□□ -0.19
TRAFD1-202ENST00000412615 COL18A1P39060 1754 aa13.87□□□□□ -0.19
TRAFD1-202ENST00000412615 CRYBG1Q9Y4K1 1723 aa13.87□□□□□ -0.19
TRAFD1-202ENST00000412615 CYP27B1O15528 508 aa13.87□□□□□ -0.19
TRAFD1-202ENST00000412615 ZNF445P59923 1031 aa13.87□□□□□ -0.19
TRAFD1-202ENST00000412615 MYD88Q99836 296 aa13.87□□□□□ -0.19
TRAFD1-202ENST00000412615 USP16Q9Y5T5 823 aa13.87□□□□□ -0.19
TRAFD1-202ENST00000412615 HIP1O00291 1037 aa13.86□□□□□ -0.19
TRAFD1-202ENST00000412615 CPDO75976 1380 aa13.86□□□□□ -0.19
TRAFD1-202ENST00000412615 CAVIN1Q6NZI2 390 aaKnown RBP13.86□□□□□ -0.19
TRAFD1-202ENST00000412615 EAF2Q96CJ1 260 aaPredicted RBP13.86□□□□□ -0.19
TRAFD1-202ENST00000412615 CABP4P57796 275 aa13.85□□□□□ -0.19
TRAFD1-202ENST00000412615 RASEFQ8IZ41 740 aa13.85□□□□□ -0.19
TRAFD1-202ENST00000412615 TTC14Q96N46 770 aa13.85□□□□□ -0.19
TRAFD1-202ENST00000412615 MRC1P22897 1456 aa13.85□□□□□ -0.19
TRAFD1-202ENST00000412615 LRP10Q7Z4F1 713 aa13.85□□□□□ -0.19
TRAFD1-202ENST00000412615 FOXD4L5Q5VV16 416 aaPredicted RBP13.84□□□□□ -0.19
TRAFD1-202ENST00000412615 FOXD4L4Q8WXT5 416 aaPredicted RBP13.84□□□□□ -0.19
TRAFD1-202ENST00000412615 CCDC8Q9H0W5 538 aaPredicted RBP13.84□□□□□ -0.19
TRAFD1-202ENST00000412615 LIMCH1Q9UPQ0 1083 aa13.84□□□□□ -0.19
TRAFD1-202ENST00000412615 C5P01031 1676 aa13.84□□□□□ -0.19
TRAFD1-202ENST00000412615 ZSCAN23Q3MJ62 389 aa13.84□□□□□ -0.19
TRAFD1-202ENST00000412615 WDR33Q9C0J8 1336 aaKnown RBP13.83□□□□□ -0.2
TRAFD1-202ENST00000412615 MBD3O95983 291 aa13.83□□□□□ -0.2
TRAFD1-202ENST00000412615 SIL1Q9H173 461 aa13.83□□□□□ -0.2
TRAFD1-202ENST00000412615 AK2P54819 239 aa13.83□□□□□ -0.2
TRAFD1-202ENST00000412615 GPT2Q8TD30 523 aa13.83□□□□□ -0.2
TRAFD1-202ENST00000412615 TM6SF1Q9BZW5 370 aa13.83□□□□□ -0.2
TRAFD1-202ENST00000412615 COPRSQ9NQ92 184 aa13.83□□□□□ -0.2
TRAFD1-202ENST00000412615 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.83□□□□□ -0.2
TRAFD1-202ENST00000412615 STRCP1A6NGW2 1772 aa13.83□□□□□ -0.2
TRAFD1-202ENST00000412615 NASPP49321 788 aaPredicted RBP13.82□□□□□ -0.2
TRAFD1-202ENST00000412615 PTH1RQ03431 593 aa13.82□□□□□ -0.2
TRAFD1-202ENST00000412615 ANP32BQ92688 251 aaKnown RBP13.82□□□□□ -0.2
TRAFD1-202ENST00000412615 KCNB2Q92953 911 aa13.82□□□□□ -0.2
TRAFD1-202ENST00000412615 RRAGDQ9NQL2 400 aaPredicted RBP13.82□□□□□ -0.2
TRAFD1-202ENST00000412615 ZKSCAN1P17029 563 aaPredicted RBP13.82□□□□□ -0.2
TRAFD1-202ENST00000412615 CASTP20810 708 aaKnown RBP13.82□□□□□ -0.2
TRAFD1-202ENST00000412615 EPHA10Q5JZY3 1008 aa13.82□□□□□ -0.2
TRAFD1-202ENST00000412615 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.82□□□□□ -0.2
TRAFD1-202ENST00000412615 COL15A1P39059 1388 aa13.81□□□□□ -0.2
TRAFD1-202ENST00000412615 CCDC171Q6TFL3 1326 aa13.81□□□□□ -0.2
TRAFD1-202ENST00000412615 NECTIN1Q15223 517 aa13.81□□□□□ -0.2
TRAFD1-202ENST00000412615 VPS53Q5VIR6 699 aa13.81□□□□□ -0.2
TRAFD1-202ENST00000412615 PRPF40BQ6NWY9 871 aaKnown RBP13.81□□□□□ -0.2
TRAFD1-202ENST00000412615 RUFY3Q7L099 469 aa13.81□□□□□ -0.2
TRAFD1-202ENST00000412615 PLBD2Q8NHP8 589 aa13.81□□□□□ -0.2
TRAFD1-202ENST00000412615 KLHDC4Q8TBB5 520 aa13.81□□□□□ -0.2
TRAFD1-202ENST00000412615 TRIM44Q96DX7 344 aaPredicted RBP13.81□□□□□ -0.2
TRAFD1-202ENST00000412615 BOLA2Q9H3K6 86 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms