RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 MTUS2Q5JR59 1369 aa8.31□□□□□ -1.08
LINC00342-201ENST00000412393 ATP10AO60312 1499 aa8.31□□□□□ -1.08
LINC00342-201ENST00000412393 LOC105371045A0A1W2PR82 267 aa8.3□□□□□ -1.08
LINC00342-201ENST00000412393 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.3□□□□□ -1.08
LINC00342-201ENST00000412393 C1QTNF9BB2RNN3 333 aa8.3□□□□□ -1.08
LINC00342-201ENST00000412393 TRAK2O60296 914 aa8.3□□□□□ -1.08
LINC00342-201ENST00000412393 CSB-PGBD3P0DP91 1061 aa8.3□□□□□ -1.08
LINC00342-201ENST00000412393 C1orf229Q6ZS94 237 aaPredicted RBP8.3□□□□□ -1.08
LINC00342-201ENST00000412393 PGBD3Q8N328 593 aa8.3□□□□□ -1.08
LINC00342-201ENST00000412393 AFAP1Q8N556 730 aa8.3□□□□□ -1.08
LINC00342-201ENST00000412393 PROCA1Q8NCQ7 364 aaPredicted RBP8.3□□□□□ -1.08
LINC00342-201ENST00000412393 C9orf84Q5VXU9 1444 aa8.29□□□□□ -1.08
LINC00342-201ENST00000412393 EHBP1L1Q8N3D4 1523 aa8.29□□□□□ -1.08
LINC00342-201ENST00000412393 ARHGEF12Q9NZN5 1544 aa8.29□□□□□ -1.08
LINC00342-201ENST00000412393 GPATCH8Q9UKJ3 1502 aaKnown RBP8.29□□□□□ -1.08
LINC00342-201ENST00000412393 HOXB4P17483 251 aaPredicted RBP8.29□□□□□ -1.08
LINC00342-201ENST00000412393 GTF2E1P29083 439 aaPredicted RBP8.29□□□□□ -1.08
LINC00342-201ENST00000412393 MLECQ14165 292 aa8.29□□□□□ -1.08
LINC00342-201ENST00000412393 EFHC2Q5JST6 749 aa8.29□□□□□ -1.08
LINC00342-201ENST00000412393 FBXO31Q5XUX0 539 aaPredicted RBP8.29□□□□□ -1.08
LINC00342-201ENST00000412393 ESYT1Q9BSJ8 1104 aa8.29□□□□□ -1.08
LINC00342-201ENST00000412393 SLC24A3Q9HC58 644 aa8.29□□□□□ -1.08
LINC00342-201ENST00000412393 ZNF777Q9ULD5 760 aaPredicted RBP8.29□□□□□ -1.08
LINC00342-201ENST00000412393 SAMD9LQ8IVG5 1584 aa8.29□□□□□ -1.08
LINC00342-201ENST00000412393 DIP2CQ9Y2E4 1556 aa8.29□□□□□ -1.08
LINC00342-201ENST00000412393 KIDINS220Q9ULH0 1771 aa8.29□□□□□ -1.08
LINC00342-201ENST00000412393 ABCA6Q8N139 1617 aa8.29□□□□□ -1.08
LINC00342-201ENST00000412393 TRAPPC8Q9Y2L5 1435 aa8.29□□□□□ -1.08
LINC00342-201ENST00000412393 MLH3Q9UHC1 1453 aa8.28□□□□□ -1.08
LINC00342-201ENST00000412393 CCNB3Q8WWL7 1395 aa8.28□□□□□ -1.08
LINC00342-201ENST00000412393 BMP4P12644 408 aa8.28□□□□□ -1.08
LINC00342-201ENST00000412393 CD163Q86VB7 1156 aa8.28□□□□□ -1.08
LINC00342-201ENST00000412393 ARHGEF10LQ9HCE6 1279 aa8.28□□□□□ -1.08
LINC00342-201ENST00000412393 SUPT6HQ7KZ85 1726 aaKnown RBP8.27□□□□□ -1.09
LINC00342-201ENST00000412393 THBS1P07996 1170 aa8.27□□□□□ -1.09
LINC00342-201ENST00000412393 EPXP11678 715 aa8.27□□□□□ -1.09
LINC00342-201ENST00000412393 UBAP2LQ14157 1087 aaKnown RBP8.27□□□□□ -1.09
LINC00342-201ENST00000412393 CFDP1Q9UEE9 299 aaPredicted RBP8.27□□□□□ -1.09
LINC00342-201ENST00000412393 ZNF330Q9Y3S2 320 aaPredicted RBP8.27□□□□□ -1.09
LINC00342-201ENST00000412393 SYCP2Q9BX26 1530 aa8.27□□□□□ -1.09
LINC00342-201ENST00000412393 TIAM1Q13009 1591 aa8.27□□□□□ -1.09
LINC00342-201ENST00000412393 REREQ9P2R6 1566 aa8.27□□□□□ -1.09
LINC00342-201ENST00000412393 PLEKHH2Q8IVE3 1493 aa8.26□□□□□ -1.09
LINC00342-201ENST00000412393 ARAFP10398 606 aa8.26□□□□□ -1.09
LINC00342-201ENST00000412393 GNASQ5JWF2 1037 aa8.26□□□□□ -1.09
LINC00342-201ENST00000412393 CNKSR1Q969H4 720 aa8.26□□□□□ -1.09
LINC00342-201ENST00000412393 OSBPL3Q9H4L5 887 aa8.26□□□□□ -1.09
LINC00342-201ENST00000412393 SETD1BQ9UPS6 1966 aaKnown RBP8.25□□□□□ -1.09
LINC00342-201ENST00000412393 DGKGP49619 791 aa8.25□□□□□ -1.09
LINC00342-201ENST00000412393 HNRNPMP52272 730 aaKnown RBP eCLIP8.25□□□□□ -1.09
LINC00342-201ENST00000412393 TMEM259Q4ZIN3 620 aa8.25□□□□□ -1.09
LINC00342-201ENST00000412393 FIGNL1Q6PIW4 674 aa8.25□□□□□ -1.09
LINC00342-201ENST00000412393 BTBD6Q96KE9 485 aa8.25□□□□□ -1.09
LINC00342-201ENST00000412393 ZSCAN10Q96SZ4 725 aaPredicted RBP8.25□□□□□ -1.09
LINC00342-201ENST00000412393 TRIM34Q9BYJ4 488 aa8.25□□□□□ -1.09
LINC00342-201ENST00000412393 SUV39H2Q9H5I1 410 aa8.25□□□□□ -1.09
LINC00342-201ENST00000412393 GPAMQ9HCL2 828 aa8.25□□□□□ -1.09
LINC00342-201ENST00000412393 GGA1Q9UJY5 639 aa8.25□□□□□ -1.09
LINC00342-201ENST00000412393 VPS8Q8N3P4 1428 aa8.25□□□□□ -1.09
LINC00342-201ENST00000412393 KIAA1107Q9UPP5 1409 aa8.24□□□□□ -1.09
LINC00342-201ENST00000412393 KRTAP9-6A0A140TA67 174 aa8.24□□□□□ -1.09
LINC00342-201ENST00000412393 FBXO45P0C2W1 286 aa8.24□□□□□ -1.09
LINC00342-201ENST00000412393 FGFR3P22607 806 aa8.24□□□□□ -1.09
LINC00342-201ENST00000412393 RFC5P40937 340 aa8.24□□□□□ -1.09
LINC00342-201ENST00000412393 SCTRP47872 440 aa8.24□□□□□ -1.09
LINC00342-201ENST00000412393 CENPCQ03188 943 aa8.24□□□□□ -1.09
LINC00342-201ENST00000412393 PCDHB11Q9Y5F2 797 aa8.24□□□□□ -1.09
LINC00342-201ENST00000412393 SPAG9O60271 1321 aaKnown RBP8.24□□□□□ -1.09
LINC00342-201ENST00000412393 AGLP35573 1532 aa8.24□□□□□ -1.09
LINC00342-201ENST00000412393 CRISPLD1Q9H336 500 aa8.23□□□□□ -1.09
LINC00342-201ENST00000412393 AVENQ9NQS1 362 aaPredicted RBP8.23□□□□□ -1.09
LINC00342-201ENST00000412393 NDFIP2Q9NV92 336 aa8.23□□□□□ -1.09
LINC00342-201ENST00000412393 NCOA2Q15596 1464 aa8.23□□□□□ -1.09
LINC00342-201ENST00000412393 ATP7AQ04656 1500 aa8.23□□□□□ -1.09
LINC00342-201ENST00000412393 INO80Q9ULG1 1556 aaPredicted RBP8.22□□□□□ -1.09
LINC00342-201ENST00000412393 C3P01024 1663 aa8.22□□□□□ -1.09
LINC00342-201ENST00000412393 LMTK3Q96Q04 1460 aa8.22□□□□□ -1.09
LINC00342-201ENST00000412393 CHRNA4P43681 627 aa8.22□□□□□ -1.09
LINC00342-201ENST00000412393 ESCO1Q5FWF5 840 aa8.22□□□□□ -1.09
LINC00342-201ENST00000412393 ZMYM1Q5SVZ6 1142 aa8.22□□□□□ -1.09
LINC00342-201ENST00000412393 RNF135Q8IUD6 432 aa8.22□□□□□ -1.09
LINC00342-201ENST00000412393 SEMA6BQ9H3T3 888 aa8.22□□□□□ -1.09
LINC00342-201ENST00000412393 HRH3Q9Y5N1 445 aa8.22□□□□□ -1.09
LINC00342-201ENST00000412393 ZNF644Q9H582 1327 aaPredicted RBP8.22□□□□□ -1.09
LINC00342-201ENST00000412393 ADGBQ8N7X0 1667 aa8.21□□□□□ -1.09
LINC00342-201ENST00000412393 PREX1Q8TCU6 1659 aa8.21□□□□□ -1.09
LINC00342-201ENST00000412393 C2CD2LO14523 706 aa8.21□□□□□ -1.1
LINC00342-201ENST00000412393 MYCP01106 439 aaPredicted RBP8.21□□□□□ -1.1
LINC00342-201ENST00000412393 NR1H3Q13133 447 aa8.21□□□□□ -1.1
LINC00342-201ENST00000412393 TMEM214Q6NUQ4 689 aaKnown RBP8.21□□□□□ -1.1
LINC00342-201ENST00000412393 XAGE2Q96GT9 111 aa8.21□□□□□ -1.1
LINC00342-201ENST00000412393 LRRC9Q6ZRR7 1453 aa8.2□□□□□ -1.1
LINC00342-201ENST00000412393 MAP3K1Q13233 1512 aa8.2□□□□□ -1.1
LINC00342-201ENST00000412393 IL2RAP01589 272 aa8.2□□□□□ -1.1
LINC00342-201ENST00000412393 MSX1P28360 303 aa8.2□□□□□ -1.1
LINC00342-201ENST00000412393 CEBPAP49715 358 aaPredicted RBP8.2□□□□□ -1.1
LINC00342-201ENST00000412393 C1orf216Q8TAB5 229 aa8.2□□□□□ -1.1
LINC00342-201ENST00000412393 ABHD17AQ96GS6 310 aa8.2□□□□□ -1.1
LINC00342-201ENST00000412393 CAMSAP2Q08AD1 1489 aa8.19□□□□□ -1.1
LINC00342-201ENST00000412393 MBD5Q9P267 1494 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms