RNA–Protein interactions for RNA: ENST00000412256.1

RAB11FIP3-202, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-202ENST00000412256 TAOK3Q9H2K8 898 aa18.54■□□□□ 0.56
RAB11FIP3-202ENST00000412256 MIS18AQ9NYP9 233 aa18.54■□□□□ 0.56
RAB11FIP3-202ENST00000412256 ZNF652Q9Y2D9 606 aa18.54■□□□□ 0.56
RAB11FIP3-202ENST00000412256 HTATSF1O43719 755 aaKnown RBP18.53■□□□□ 0.56
RAB11FIP3-202ENST00000412256 TAF7Q15545 349 aaPredicted RBP18.53■□□□□ 0.56
RAB11FIP3-202ENST00000412256 PRPF40BQ6NWY9 871 aaKnown RBP18.53■□□□□ 0.56
RAB11FIP3-202ENST00000412256 FAM177BA6PVY3 158 aa18.52■□□□□ 0.56
RAB11FIP3-202ENST00000412256 NEFMP07197 916 aa18.52■□□□□ 0.56
RAB11FIP3-202ENST00000412256 TPTE2Q6XPS3 522 aa18.52■□□□□ 0.56
RAB11FIP3-202ENST00000412256 POTECB2RU33 542 aa18.51■□□□□ 0.55
RAB11FIP3-202ENST00000412256 NBPF26B4DH59 902 aa18.51■□□□□ 0.55
RAB11FIP3-202ENST00000412256 SOGA3Q5TF21 947 aa18.51■□□□□ 0.55
RAB11FIP3-202ENST00000412256 NBPF10Q6P3W6 841 aaKnown RBP18.51■□□□□ 0.55
RAB11FIP3-202ENST00000412256 NBPF15Q8N660 670 aa18.51■□□□□ 0.55
RAB11FIP3-202ENST00000412256 NIP7Q9Y221 180 aaKnown RBP eCLIP18.51■□□□□ 0.55
RAB11FIP3-202ENST00000412256 GTF2E1P29083 439 aaPredicted RBP18.5■□□□□ 0.55
RAB11FIP3-202ENST00000412256 NGEFQ8N5V2 710 aa18.5■□□□□ 0.55
RAB11FIP3-202ENST00000412256 JMYQ8N9B5 988 aa18.5■□□□□ 0.55
RAB11FIP3-202ENST00000412256 SIPA1L3O60292 1781 aaPredicted RBP18.5■□□□□ 0.55
RAB11FIP3-202ENST00000412256 TNRC6CQ9HCJ0 1690 aaKnown RBP18.49■□□□□ 0.55
RAB11FIP3-202ENST00000412256 DLEC1Q9Y238 1755 aa18.49■□□□□ 0.55
RAB11FIP3-202ENST00000412256 WDR90Q96KV7 1748 aa18.49■□□□□ 0.55
RAB11FIP3-202ENST00000412256 LTBP3Q9NS15 1303 aa18.49■□□□□ 0.55
RAB11FIP3-202ENST00000412256 DDNO94850 711 aaPredicted RBP18.48■□□□□ 0.55
RAB11FIP3-202ENST00000412256 NPR1P16066 1061 aa18.48■□□□□ 0.55
RAB11FIP3-202ENST00000412256 ANKRD31Q8N7Z5 1873 aa18.48■□□□□ 0.55
RAB11FIP3-202ENST00000412256 HLFQ16534 295 aa18.47■□□□□ 0.55
RAB11FIP3-202ENST00000412256 SCN7AQ01118 1682 aa18.47■□□□□ 0.55
RAB11FIP3-202ENST00000412256 CCDC88AQ3V6T2 1871 aa18.46■□□□□ 0.55
RAB11FIP3-202ENST00000412256 CCDC93Q567U6 631 aa18.46■□□□□ 0.55
RAB11FIP3-202ENST00000412256 PNISRQ8TF01 805 aaKnown RBP18.46■□□□□ 0.55
RAB11FIP3-202ENST00000412256 C7orf43Q8WVR3 580 aa18.46■□□□□ 0.55
RAB11FIP3-202ENST00000412256 RRP7AQ9Y3A4 280 aaKnown RBP18.46■□□□□ 0.55
RAB11FIP3-202ENST00000412256 SLX4Q8IY92 1834 aa18.44■□□□□ 0.54
RAB11FIP3-202ENST00000412256 KLRG2A4D1S0 409 aaPredicted RBP18.44■□□□□ 0.54
RAB11FIP3-202ENST00000412256 RGL2O15211 777 aa18.44■□□□□ 0.54
RAB11FIP3-202ENST00000412256 COL13A1Q5TAT6 717 aaPredicted RBP18.44■□□□□ 0.54
RAB11FIP3-202ENST00000412256 CHADLQ6NUI6 762 aa18.44■□□□□ 0.54
RAB11FIP3-202ENST00000412256 OLFM4Q6UX06 510 aa18.44■□□□□ 0.54
RAB11FIP3-202ENST00000412256 ZNF277Q9NRM2 450 aaPredicted RBP18.44■□□□□ 0.54
RAB11FIP3-202ENST00000412256 ALDH1B1P30837 517 aa18.43■□□□□ 0.54
RAB11FIP3-202ENST00000412256 THUMPD2Q9BTF0 503 aaKnown RBP18.43■□□□□ 0.54
RAB11FIP3-202ENST00000412256 COL11A2P13942 1736 aaPredicted RBP18.43■□□□□ 0.54
RAB11FIP3-202ENST00000412256 POTEIP0CG38 1075 aa18.42■□□□□ 0.54
RAB11FIP3-202ENST00000412256 POTEJP0CG39 1038 aa18.42■□□□□ 0.54
RAB11FIP3-202ENST00000412256 MYL6BP14649 208 aa18.42■□□□□ 0.54
RAB11FIP3-202ENST00000412256 FKBP4Q02790 459 aaKnown RBP eCLIP18.42■□□□□ 0.54
RAB11FIP3-202ENST00000412256 NFE2L2Q16236 605 aa18.42■□□□□ 0.54
RAB11FIP3-202ENST00000412256 RTKN2Q8IZC4 609 aa18.42■□□□□ 0.54
RAB11FIP3-202ENST00000412256 TIAM2Q8IVF5 1701 aa18.41■□□□□ 0.54
RAB11FIP3-202ENST00000412256 IQCA1LA6NCM1 817 aa18.41■□□□□ 0.54
RAB11FIP3-202ENST00000412256 EIF4A1P60842 406 aaKnown RBP18.41■□□□□ 0.54
RAB11FIP3-202ENST00000412256 KIF6Q6ZMV9 814 aa18.41■□□□□ 0.54
RAB11FIP3-202ENST00000412256 NUTM1Q86Y26 1132 aa18.41■□□□□ 0.54
RAB11FIP3-202ENST00000412256 PLEKHF1Q96S99 279 aa18.41■□□□□ 0.54
RAB11FIP3-202ENST00000412256 NYXQ9GZU5 481 aa18.41■□□□□ 0.54
RAB11FIP3-202ENST00000412256 PNNQ9H307 717 aaKnown RBP18.41■□□□□ 0.54
RAB11FIP3-202ENST00000412256 FER1L6Q2WGJ9 1857 aa18.4■□□□□ 0.54
RAB11FIP3-202ENST00000412256 ERVV-1B6SEH8 477 aa18.4■□□□□ 0.54
RAB11FIP3-202ENST00000412256 TTLL7Q6ZT98 887 aa18.4■□□□□ 0.54
RAB11FIP3-202ENST00000412256 SYNE4Q8N205 404 aa18.4■□□□□ 0.54
RAB11FIP3-202ENST00000412256 MAPK8IP3Q9UPT6 1336 aa18.4■□□□□ 0.54
RAB11FIP3-202ENST00000412256 PCNTO95613 3336 aa18.39■□□□□ 0.54
RAB11FIP3-202ENST00000412256 GPTP24298 496 aa18.39■□□□□ 0.53
RAB11FIP3-202ENST00000412256 ZBTB3Q9H5J0 574 aa18.39■□□□□ 0.53
RAB11FIP3-202ENST00000412256 MAP3K15Q6ZN16 1313 aa18.39■□□□□ 0.53
RAB11FIP3-202ENST00000412256 HSPA1AP0DMV8 641 aaKnown RBP18.38■□□□□ 0.53
RAB11FIP3-202ENST00000412256 HSPA1BP0DMV9 641 aaKnown RBP18.38■□□□□ 0.53
RAB11FIP3-202ENST00000412256 EAPPQ56P03 285 aaPredicted RBP18.38■□□□□ 0.53
RAB11FIP3-202ENST00000412256 TAF1DQ9H5J8 278 aaPredicted RBP18.38■□□□□ 0.53
RAB11FIP3-202ENST00000412256 MKRN1Q9UHC7 482 aaKnown RBP18.38■□□□□ 0.53
RAB11FIP3-202ENST00000412256 CLEC11AQ9Y240 323 aa18.38■□□□□ 0.53
RAB11FIP3-202ENST00000412256 BCORQ6W2J9 1755 aa18.37■□□□□ 0.53
RAB11FIP3-202ENST00000412256 LDHDQ86WU2 507 aa18.37■□□□□ 0.53
RAB11FIP3-202ENST00000412256 TNS4Q8IZW8 715 aa18.37■□□□□ 0.53
RAB11FIP3-202ENST00000412256 RPGRQ92834 1020 aaKnown RBP18.37■□□□□ 0.53
RAB11FIP3-202ENST00000412256 L3MBTL3Q96JM7 780 aaPredicted RBP18.37■□□□□ 0.53
RAB11FIP3-202ENST00000412256 CREBZFQ9NS37 354 aa18.37■□□□□ 0.53
RAB11FIP3-202ENST00000412256 CAPN15O75808 1086 aa18.36■□□□□ 0.53
RAB11FIP3-202ENST00000412256 IARSP41252 1262 aaKnown RBP18.36■□□□□ 0.53
RAB11FIP3-202ENST00000412256 SUSD4Q5VX71 490 aa18.36■□□□□ 0.53
RAB11FIP3-202ENST00000412256 JDP2Q8WYK2 163 aa18.36■□□□□ 0.53
RAB11FIP3-202ENST00000412256 ZNF541Q9H0D2 1346 aa18.36■□□□□ 0.53
RAB11FIP3-202ENST00000412256 HACL1Q9UJ83 578 aa18.36■□□□□ 0.53
RAB11FIP3-202ENST00000412256 DICER1Q9UPY3 1922 aaKnown RBP18.35■□□□□ 0.53
RAB11FIP3-202ENST00000412256 CACNA1SQ13698 1873 aa18.35■□□□□ 0.53
RAB11FIP3-202ENST00000412256 TCERG1O14776 1098 aaKnown RBP18.35■□□□□ 0.53
RAB11FIP3-202ENST00000412256 EIF2S2P20042 333 aaKnown RBP18.35■□□□□ 0.53
RAB11FIP3-202ENST00000412256 CRY2Q49AN0 593 aa18.35■□□□□ 0.53
RAB11FIP3-202ENST00000412256 TSPYL4Q9UJ04 414 aa18.35■□□□□ 0.53
RAB11FIP3-202ENST00000412256 RIPK4P57078 832 aa18.34■□□□□ 0.53
RAB11FIP3-202ENST00000412256 ABCC12Q96J65 1359 aa18.33■□□□□ 0.53
RAB11FIP3-202ENST00000412256 FZD9O00144 591 aa18.33■□□□□ 0.52
RAB11FIP3-202ENST00000412256 EPHX2P34913 555 aa18.33■□□□□ 0.52
RAB11FIP3-202ENST00000412256 CC2D2BQ6DHV5 1058 aa18.33■□□□□ 0.52
RAB11FIP3-202ENST00000412256 RBM17Q96I25 401 aaKnown RBP18.33■□□□□ 0.52
RAB11FIP3-202ENST00000412256 PSMD1Q99460 953 aa18.33■□□□□ 0.52
RAB11FIP3-202ENST00000412256 UBN2Q6ZU65 1347 aa18.32■□□□□ 0.52
RAB11FIP3-202ENST00000412256 HOXA10P31260 410 aaPredicted RBP18.32■□□□□ 0.52
RAB11FIP3-202ENST00000412256 GIGYF2Q6Y7W6 1299 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms