RNA–Protein interactions for RNA: ENST00000411651.6

SUMO3-204, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2 BASIC

Gene SUMO3, Length 1,921 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-204ENST00000411651 BCL11AQ9H165 835 aa24.68■■□□□ 1.54
SUMO3-204ENST00000411651 ANAPC15P60006 121 aa24.67■■□□□ 1.54
SUMO3-204ENST00000411651 AIMP1Q12904 312 aaKnown RBP24.67■■□□□ 1.54
SUMO3-204ENST00000411651 ARFGEF2Q9Y6D5 1785 aa24.67■■□□□ 1.54
SUMO3-204ENST00000411651 CLASRPQ8N2M8 674 aaKnown RBP24.67■■□□□ 1.54
SUMO3-204ENST00000411651 KAZALD1Q96I82 304 aa24.67■■□□□ 1.54
SUMO3-204ENST00000411651 SUCLG2Q96I99 432 aa24.67■■□□□ 1.54
SUMO3-204ENST00000411651 AHDC1Q5TGY3 1603 aaPredicted RBP24.65■■□□□ 1.54
SUMO3-204ENST00000411651 COL22A1Q8NFW1 1626 aaPredicted RBP24.65■■□□□ 1.54
SUMO3-204ENST00000411651 TRIM6-TRIM34B2RNG4 842 aa24.65■■□□□ 1.54
SUMO3-204ENST00000411651 GLRX3O76003 335 aaKnown RBP24.65■■□□□ 1.54
SUMO3-204ENST00000411651 MYL6BP14649 208 aa24.65■■□□□ 1.54
SUMO3-204ENST00000411651 COL14A1Q05707 1796 aaKnown RBP24.65■■□□□ 1.54
SUMO3-204ENST00000411651 MCCP23508 829 aa24.65■■□□□ 1.54
SUMO3-204ENST00000411651 TSHZ3Q63HK5 1081 aa24.65■■□□□ 1.54
SUMO3-204ENST00000411651 PLBD2Q8NHP8 589 aa24.65■■□□□ 1.54
SUMO3-204ENST00000411651 ST18O60284 1047 aa24.64■■□□□ 1.53
SUMO3-204ENST00000411651 CD2BP2O95400 341 aaKnown RBP24.64■■□□□ 1.53
SUMO3-204ENST00000411651 OS9Q13438 667 aaPredicted RBP24.64■■□□□ 1.53
SUMO3-204ENST00000411651 GSE1Q14687 1217 aa24.64■■□□□ 1.53
SUMO3-204ENST00000411651 GPATCH3Q96I76 525 aa24.64■■□□□ 1.53
SUMO3-204ENST00000411651 BICC1Q9H694 974 aaKnown RBP24.64■■□□□ 1.53
SUMO3-204ENST00000411651 AK9Q5TCS8 1911 aa24.64■■□□□ 1.53
SUMO3-204ENST00000411651 EVA1CP58658 441 aa24.63■■□□□ 1.53
SUMO3-204ENST00000411651 NUTM1Q86Y26 1132 aa24.63■■□□□ 1.53
SUMO3-204ENST00000411651 CNTROBQ8N137 903 aa24.63■■□□□ 1.53
SUMO3-204ENST00000411651 RILPL2Q969X0 211 aa24.63■■□□□ 1.53
SUMO3-204ENST00000411651 RBM42Q9BTD8 480 aaKnown RBP24.63■■□□□ 1.53
SUMO3-204ENST00000411651 MYD88Q99836 296 aa24.62■■□□□ 1.53
SUMO3-204ENST00000411651 PLCH1Q4KWH8 1693 aa24.61■■□□□ 1.53
SUMO3-204ENST00000411651 RABL6Q3YEC7 729 aaPredicted RBP24.6■■□□□ 1.53
SUMO3-204ENST00000411651 SPRYD3Q8NCJ5 442 aa24.6■■□□□ 1.53
SUMO3-204ENST00000411651 ECHDC1Q9NTX5 307 aa24.6■■□□□ 1.53
SUMO3-204ENST00000411651 AFDNP55196 1824 aaKnown RBP24.6■■□□□ 1.53
SUMO3-204ENST00000411651 MCM4P33991 863 aa24.59■■□□□ 1.53
SUMO3-204ENST00000411651 MCM2P49736 904 aa24.59■■□□□ 1.53
SUMO3-204ENST00000411651 G3BP1Q13283 466 aaKnown RBP eCLIP24.59■■□□□ 1.53
SUMO3-204ENST00000411651 UNC5CLQ8IV45 518 aa24.59■■□□□ 1.53
SUMO3-204ENST00000411651 LRP6O75581 1613 aa24.59■■□□□ 1.53
SUMO3-204ENST00000411651 NUP188Q5SRE5 1749 aa24.59■■□□□ 1.53
SUMO3-204ENST00000411651 DISP2A7MBM2 1401 aa24.59■■□□□ 1.53
SUMO3-204ENST00000411651 HSP90AA1P07900 732 aaKnown RBP24.59■■□□□ 1.53
SUMO3-204ENST00000411651 TOGARAM1Q9Y4F4 1720 aa24.59■■□□□ 1.53
SUMO3-204ENST00000411651 RAB3GAP1Q15042 981 aa24.58■■□□□ 1.53
SUMO3-204ENST00000411651 COPRSQ9NQ92 184 aa24.58■■□□□ 1.53
SUMO3-204ENST00000411651 STRN4Q9NRL3 753 aa24.58■■□□□ 1.53
SUMO3-204ENST00000411651 IFIT2P09913 472 aaKnown RBP24.57■■□□□ 1.52
SUMO3-204ENST00000411651 DDX11L8A8MPP1 907 aa24.56■■□□□ 1.52
SUMO3-204ENST00000411651 VSIG10Q8N0Z9 540 aa24.56■■□□□ 1.52
SUMO3-204ENST00000411651 ROBO1Q9Y6N7 1651 aa24.56■■□□□ 1.52
SUMO3-204ENST00000411651 NBPF26B4DH59 902 aa24.55■■□□□ 1.52
SUMO3-204ENST00000411651 SGSM2O43147 1006 aa24.55■■□□□ 1.52
SUMO3-204ENST00000411651 NBPF14Q5TI25 921 aa24.55■■□□□ 1.52
SUMO3-204ENST00000411651 NBPF10Q6P3W6 841 aaKnown RBP24.55■■□□□ 1.52
SUMO3-204ENST00000411651 NBPF15Q8N660 670 aa24.55■■□□□ 1.52
SUMO3-204ENST00000411651 TEX13AQ9BXU3 409 aaPredicted RBP24.55■■□□□ 1.52
SUMO3-204ENST00000411651 PA2G4Q9UQ80 394 aaKnown RBP24.55■■□□□ 1.52
SUMO3-204ENST00000411651 SASH1O94885 1247 aa24.55■■□□□ 1.52
SUMO3-204ENST00000411651 CASP7P55210 303 aa24.55■■□□□ 1.52
SUMO3-204ENST00000411651 CWC22Q9HCG8 908 aaKnown RBP24.55■■□□□ 1.52
SUMO3-204ENST00000411651 ANO2Q9NQ90 1003 aa24.55■■□□□ 1.52
SUMO3-204ENST00000411651 PTMSP20962 102 aa24.54■■□□□ 1.52
SUMO3-204ENST00000411651 CLEC17AQ6ZS10 378 aa24.54■■□□□ 1.52
SUMO3-204ENST00000411651 DDX54Q8TDD1 881 aaKnown RBP24.53■■□□□ 1.52
SUMO3-204ENST00000411651 RUFY2Q8WXA3 655 aa24.53■■□□□ 1.52
SUMO3-204ENST00000411651 EVI5LQ96CN4 794 aa24.53■■□□□ 1.52
SUMO3-204ENST00000411651 TMOD3Q9NYL9 352 aa24.53■■□□□ 1.52
SUMO3-204ENST00000411651 RAD50Q92878 1312 aa24.53■■□□□ 1.52
SUMO3-204ENST00000411651 AACSQ86V21 672 aa24.52■■□□□ 1.52
SUMO3-204ENST00000411651 GBP4Q96PP9 640 aa24.52■■□□□ 1.52
SUMO3-204ENST00000411651 BTG4Q9NY30 223 aa24.52■■□□□ 1.52
SUMO3-204ENST00000411651 COL16A1Q07092 1604 aaPredicted RBP24.51■■□□□ 1.51
SUMO3-204ENST00000411651 H7C1W4 665 aa24.51■■□□□ 1.51
SUMO3-204ENST00000411651 HIP1O00291 1037 aa24.51■■□□□ 1.51
SUMO3-204ENST00000411651 HSPA4P34932 840 aa24.51■■□□□ 1.51
SUMO3-204ENST00000411651 RFX5P48382 616 aaPredicted RBP24.51■■□□□ 1.51
SUMO3-204ENST00000411651 A0A087WZG4 1122 aa24.5■■□□□ 1.51
SUMO3-204ENST00000411651 EPHA10Q5JZY3 1008 aa24.5■■□□□ 1.51
SUMO3-204ENST00000411651 CCDC191Q8NCU4 936 aa24.5■■□□□ 1.51
SUMO3-204ENST00000411651 TNPO1Q92973 898 aaKnown RBP24.49■■□□□ 1.51
SUMO3-204ENST00000411651 EAF2Q96CJ1 260 aaPredicted RBP24.49■■□□□ 1.51
SUMO3-204ENST00000411651 WNK3Q9BYP7 1800 aa24.49■■□□□ 1.51
SUMO3-204ENST00000411651 TJP1Q07157 1748 aa24.49■■□□□ 1.51
SUMO3-204ENST00000411651 NUCB2P80303 420 aa24.49■■□□□ 1.51
SUMO3-204ENST00000411651 UBE3BQ7Z3V4 1068 aa24.49■■□□□ 1.51
SUMO3-204ENST00000411651 CWC25Q9NXE8 425 aaPredicted RBP24.49■■□□□ 1.51
SUMO3-204ENST00000411651 PTPN12Q05209 780 aaKnown RBP24.48■■□□□ 1.51
SUMO3-204ENST00000411651 PIP4K2AP48426 406 aaPredicted RBP24.47■■□□□ 1.51
SUMO3-204ENST00000411651 LSG1Q9H089 658 aaKnown RBP24.47■■□□□ 1.51
SUMO3-204ENST00000411651 SNRKQ9NRH2 765 aa24.47■■□□□ 1.51
SUMO3-204ENST00000411651 LTBP4Q8N2S1 1624 aa24.47■■□□□ 1.51
SUMO3-204ENST00000411651 DIAPH3Q9NSV4 1193 aa24.46■■□□□ 1.51
SUMO3-204ENST00000411651 RFX7Q2KHR2 1363 aa24.46■■□□□ 1.51
SUMO3-204ENST00000411651 ITGB4P16144 1822 aa24.46■■□□□ 1.51
SUMO3-204ENST00000411651 NEK4P51957 841 aa24.45■■□□□ 1.51
SUMO3-204ENST00000411651 KIAA1211Q6ZU35 1233 aa24.45■■□□□ 1.51
SUMO3-204ENST00000411651 CDCA7Q9BWT1 371 aaPredicted RBP24.45■■□□□ 1.51
SUMO3-204ENST00000411651 A1BGP04217 495 aa24.45■■□□□ 1.5
SUMO3-204ENST00000411651 TRIM28Q13263 835 aaKnown RBP24.45■■□□□ 1.5
SUMO3-204ENST00000411651 TTLL7Q6ZT98 887 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms