RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 ZNF326Q5BKZ1 582 aaKnown RBP7.46□□□□□ -1.22
LSM5-205ENST00000409952 SLC9A9Q8IVB4 645 aa7.46□□□□□ -1.22
LSM5-205ENST00000409952 CLP1Q92989 425 aaKnown RBP7.46□□□□□ -1.22
LSM5-205ENST00000409952 ZNF594Q96JF6 807 aaPredicted RBP7.46□□□□□ -1.22
LSM5-205ENST00000409952 NUCKS1Q9H1E3 243 aaKnown RBP7.46□□□□□ -1.22
LSM5-205ENST00000409952 SFI1A8K8P3 1242 aa7.45□□□□□ -1.22
LSM5-205ENST00000409952 C21orf2O43822 256 aa7.45□□□□□ -1.22
LSM5-205ENST00000409952 SERPINB4P48594 390 aa7.45□□□□□ -1.22
LSM5-205ENST00000409952 LARP1Q6PKG0 1096 aaKnown RBP7.45□□□□□ -1.22
LSM5-205ENST00000409952 RIPOR1Q6ZS17 1223 aa7.45□□□□□ -1.22
LSM5-205ENST00000409952 NPAS4Q8IUM7 802 aa7.45□□□□□ -1.22
LSM5-205ENST00000409952 ANKMY2Q8IV38 441 aa7.45□□□□□ -1.22
LSM5-205ENST00000409952 NDFIP2Q9NV92 336 aa7.45□□□□□ -1.22
LSM5-205ENST00000409952 SLAIN2Q9P270 581 aa7.45□□□□□ -1.22
LSM5-205ENST00000409952 ANKRD33BA6NCL7 494 aa7.44□□□□□ -1.22
LSM5-205ENST00000409952 EML1O00423 815 aa7.44□□□□□ -1.22
LSM5-205ENST00000409952 DPYDQ12882 1025 aa7.44□□□□□ -1.22
LSM5-205ENST00000409952 STAG2Q8N3U4 1231 aa7.44□□□□□ -1.22
LSM5-205ENST00000409952 TSEN2Q8NCE0 465 aaKnown RBP7.44□□□□□ -1.22
LSM5-205ENST00000409952 GTPBP3Q969Y2 492 aaKnown RBP7.44□□□□□ -1.22
LSM5-205ENST00000409952 CNTNAP3BQ96NU0 1288 aa7.44□□□□□ -1.22
LSM5-205ENST00000409952 CFHR5Q9BXR6 569 aa7.44□□□□□ -1.22
LSM5-205ENST00000409952 CNTNAP3Q9BZ76 1288 aa7.44□□□□□ -1.22
LSM5-205ENST00000409952 TSPAN10Q9H1Z9 355 aaPredicted RBP7.44□□□□□ -1.22
LSM5-205ENST00000409952 BIN2Q9UBW5 565 aaPredicted RBP7.44□□□□□ -1.22
LSM5-205ENST00000409952 ATP2B4P23634 1241 aa7.43□□□□□ -1.22
LSM5-205ENST00000409952 NOS2P35228 1153 aa7.43□□□□□ -1.22
LSM5-205ENST00000409952 ZC3H6P61129 1189 aaKnown RBP7.43□□□□□ -1.22
LSM5-205ENST00000409952 FAM69CQ0P6D2 419 aa7.43□□□□□ -1.22
LSM5-205ENST00000409952 NLRP8Q86W28 1048 aa7.43□□□□□ -1.22
LSM5-205ENST00000409952 GAS2L2Q8NHY3 880 aa7.43□□□□□ -1.22
LSM5-205ENST00000409952 FAM200AQ8TCP9 573 aa7.43□□□□□ -1.22
LSM5-205ENST00000409952 L3MBTL2Q969R5 705 aa7.43□□□□□ -1.22
LSM5-205ENST00000409952 RUBCNLQ9H714 662 aa7.43□□□□□ -1.22
LSM5-205ENST00000409952 GPAMQ9HCL2 828 aa7.43□□□□□ -1.22
LSM5-205ENST00000409952 CABP1Q9NZU7 370 aa7.43□□□□□ -1.22
LSM5-205ENST00000409952 TXLNAP40222 546 aa7.42□□□□□ -1.22
LSM5-205ENST00000409952 PSMA6P60900 246 aaKnown RBP7.42□□□□□ -1.22
LSM5-205ENST00000409952 SRSF11Q05519 484 aaKnown RBP7.42□□□□□ -1.22
LSM5-205ENST00000409952 ZIC5Q96T25 663 aa7.42□□□□□ -1.22
LSM5-205ENST00000409952 GPC6Q9Y625 555 aaPredicted RBP7.42□□□□□ -1.22
LSM5-205ENST00000409952 NBPF1Q3BBV0 1214 aa7.41□□□□□ -1.22
LSM5-205ENST00000409952 TBCELQ5QJ74 424 aa7.41□□□□□ -1.22
LSM5-205ENST00000409952 C1orf53Q5VUE5 145 aa7.41□□□□□ -1.22
LSM5-205ENST00000409952 FOXR1Q6PIV2 292 aa7.41□□□□□ -1.22
LSM5-205ENST00000409952 PGBD3Q8N328 593 aa7.41□□□□□ -1.22
LSM5-205ENST00000409952 WHAMMQ8TF30 809 aa7.41□□□□□ -1.22
LSM5-205ENST00000409952 MBIPQ9NS73 344 aa7.41□□□□□ -1.22
LSM5-205ENST00000409952 SERTM1A2A2V5 107 aa7.4□□□□□ -1.22
LSM5-205ENST00000409952 GPR25O00155 361 aa7.4□□□□□ -1.22
LSM5-205ENST00000409952 EFHC2Q5JST6 749 aa7.4□□□□□ -1.22
LSM5-205ENST00000409952 SH3PXD2AQ5TCZ1 1133 aa7.4□□□□□ -1.22
LSM5-205ENST00000409952 SAMD5Q5TGI4 173 aa7.4□□□□□ -1.22
LSM5-205ENST00000409952 TRERF1Q96PN7 1200 aa7.4□□□□□ -1.22
LSM5-205ENST00000409952 C2orf49Q9BVC5 232 aaPredicted RBP7.4□□□□□ -1.22
LSM5-205ENST00000409952 HCN2Q9UL51 889 aa7.4□□□□□ -1.22
LSM5-205ENST00000409952 PARP3Q9Y6F1 533 aa7.4□□□□□ -1.22
LSM5-205ENST00000409952 ATAD2Q6PL18 1390 aa7.39□□□□□ -1.23
LSM5-205ENST00000409952 A0A1W2PNR3 127 aa7.39□□□□□ -1.23
LSM5-205ENST00000409952 TATP17735 454 aaPredicted RBP7.39□□□□□ -1.23
LSM5-205ENST00000409952 IGFBP4P22692 258 aa7.39□□□□□ -1.23
LSM5-205ENST00000409952 WEE1P30291 646 aa7.39□□□□□ -1.23
LSM5-205ENST00000409952 GSK3AP49840 483 aa7.39□□□□□ -1.23
LSM5-205ENST00000409952 SWI5Q1ZZU3 235 aa7.39□□□□□ -1.23
LSM5-205ENST00000409952 UBXN4Q92575 508 aa7.39□□□□□ -1.23
LSM5-205ENST00000409952 SPATA32Q96LK8 384 aa7.39□□□□□ -1.23
LSM5-205ENST00000409952 ZCCHC2Q9C0B9 1178 aaKnown RBP7.39□□□□□ -1.23
LSM5-205ENST00000409952 ATXN7L1Q9ULK2 861 aaPredicted RBP7.39□□□□□ -1.23
LSM5-205ENST00000409952 RBM19Q9Y4C8 960 aaKnown RBP7.39□□□□□ -1.23
LSM5-205ENST00000409952 BNIP3LO60238 219 aa7.38□□□□□ -1.23
LSM5-205ENST00000409952 SF3A1Q15459 793 aaKnown RBP7.38□□□□□ -1.23
LSM5-205ENST00000409952 ZNF385CQ66K41 422 aaPredicted RBP7.38□□□□□ -1.23
LSM5-205ENST00000409952 FIGNL1Q6PIW4 674 aa7.38□□□□□ -1.23
LSM5-205ENST00000409952 AIDAQ96BJ3 306 aa7.38□□□□□ -1.23
LSM5-205ENST00000409952 BCL11AQ9H165 835 aa7.38□□□□□ -1.23
LSM5-205ENST00000409952 EGFL7Q9UHF1 273 aa7.38□□□□□ -1.23
LSM5-205ENST00000409952 PCDHGC4Q9Y5F7 938 aa7.38□□□□□ -1.23
LSM5-205ENST00000409952 PPM1GO15355 546 aaPredicted RBP7.37□□□□□ -1.23
LSM5-205ENST00000409952 ARHGEF15O94989 841 aa7.37□□□□□ -1.23
LSM5-205ENST00000409952 ADAMTS2O95450 1211 aa7.37□□□□□ -1.23
LSM5-205ENST00000409952 RECKO95980 971 aa7.37□□□□□ -1.23
LSM5-205ENST00000409952 FAM157BP0CG42 384 aa7.37□□□□□ -1.23
LSM5-205ENST00000409952 FBXO33Q7Z6M2 555 aa7.37□□□□□ -1.23
LSM5-205ENST00000409952 SCG3Q8WXD2 468 aaKnown RBP7.37□□□□□ -1.23
LSM5-205ENST00000409952 KLRG1Q96E93 195 aa7.37□□□□□ -1.23
LSM5-205ENST00000409952 PHF24Q9UPV7 400 aa7.37□□□□□ -1.23
LSM5-205ENST00000409952 IGF1RP08069 1367 aa7.36□□□□□ -1.23
LSM5-205ENST00000409952 EFSO43281 561 aa7.36□□□□□ -1.23
LSM5-205ENST00000409952 PPP1R12BO60237 982 aaPredicted RBP7.36□□□□□ -1.23
LSM5-205ENST00000409952 SMARCA5O60264 1052 aaPredicted RBP7.36□□□□□ -1.23
LSM5-205ENST00000409952 TNP2Q05952 138 aa7.36□□□□□ -1.23
LSM5-205ENST00000409952 NAALADL2Q58DX5 795 aa7.36□□□□□ -1.23
LSM5-205ENST00000409952 LRRC4BQ9NT99 713 aa7.36□□□□□ -1.23
LSM5-205ENST00000409952 MX2P20592 715 aa7.35□□□□□ -1.23
LSM5-205ENST00000409952 ARSJQ5FYB0 599 aaPredicted RBP7.35□□□□□ -1.23
LSM5-205ENST00000409952 FAM182BQ5T319 152 aa7.35□□□□□ -1.23
LSM5-205ENST00000409952 ZNF232Q9UNY5 417 aa7.35□□□□□ -1.23
LSM5-205ENST00000409952 C2CD2LO14523 706 aa7.34□□□□□ -1.23
LSM5-205ENST00000409952 ATXN7O15265 892 aaPredicted RBP7.34□□□□□ -1.23
LSM5-205ENST00000409952 MAP2K3P46734 347 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms