RNA–Protein interactions for RNA: ENST00000409894.7

POLR1B-203, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best) BASIC

Gene POLR1B, Length 4,457 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-203ENST00000409894 OTUD6BQ8N6M0 293 aa10.54□□□□□ -0.72
POLR1B-203ENST00000409894 CCDC85AQ96PX6 553 aaPredicted RBP10.54□□□□□ -0.72
POLR1B-203ENST00000409894 HFM1A2PYH4 1435 aa10.54□□□□□ -0.72
POLR1B-203ENST00000409894 TMEM132AQ24JP5 1023 aa10.53□□□□□ -0.72
POLR1B-203ENST00000409894 ZSCAN25Q6NSZ9 544 aa10.53□□□□□ -0.72
POLR1B-203ENST00000409894 ZNF530Q6P9A1 599 aaPredicted RBP10.53□□□□□ -0.72
POLR1B-203ENST00000409894 CEP112Q8N8E3 955 aa10.53□□□□□ -0.72
POLR1B-203ENST00000409894 TCEANC2Q96MN5 208 aa10.53□□□□□ -0.72
POLR1B-203ENST00000409894 N4BP3O15049 544 aa10.53□□□□□ -0.72
POLR1B-203ENST00000409894 MCM10Q7L590 875 aa10.53□□□□□ -0.72
POLR1B-203ENST00000409894 LMOD1P29536 600 aaPredicted RBP10.53□□□□□ -0.72
POLR1B-203ENST00000409894 DNM1Q05193 864 aaKnown RBP10.53□□□□□ -0.72
POLR1B-203ENST00000409894 SYT10Q6XYQ8 523 aa10.53□□□□□ -0.72
POLR1B-203ENST00000409894 SNX21Q969T3 373 aa10.53□□□□□ -0.72
POLR1B-203ENST00000409894 ALS2CR12Q96Q35 445 aa10.53□□□□□ -0.72
POLR1B-203ENST00000409894 SPINK5Q9NQ38 1064 aaPredicted RBP10.53□□□□□ -0.72
POLR1B-203ENST00000409894 HYPKQ9NX55 129 aa10.53□□□□□ -0.72
POLR1B-203ENST00000409894 SNAPC4Q5SXM2 1469 aa10.53□□□□□ -0.72
POLR1B-203ENST00000409894 HSF2BPO75031 334 aa10.52□□□□□ -0.72
POLR1B-203ENST00000409894 PRPF4BQ13523 1007 aaKnown RBP10.52□□□□□ -0.72
POLR1B-203ENST00000409894 DNAJC21Q5F1R6 531 aaKnown RBP10.52□□□□□ -0.72
POLR1B-203ENST00000409894 TTC22Q5TAA0 569 aa10.52□□□□□ -0.72
POLR1B-203ENST00000409894 AOPEPQ8N6M6 819 aa10.52□□□□□ -0.72
POLR1B-203ENST00000409894 MTIF2P46199 727 aaKnown RBP10.52□□□□□ -0.73
POLR1B-203ENST00000409894 CCDC102BQ68D86 513 aa10.52□□□□□ -0.73
POLR1B-203ENST00000409894 VPS36Q86VN1 386 aa10.52□□□□□ -0.73
POLR1B-203ENST00000409894 RBSNQ9H1K0 784 aa10.52□□□□□ -0.73
POLR1B-203ENST00000409894 DHX29Q7Z478 1369 aaKnown RBP10.52□□□□□ -0.73
POLR1B-203ENST00000409894 MYO1BO43795 1136 aa10.52□□□□□ -0.73
POLR1B-203ENST00000409894 AKR1B10O60218 316 aa10.52□□□□□ -0.73
POLR1B-203ENST00000409894 ZEB2O60315 1214 aa10.52□□□□□ -0.73
POLR1B-203ENST00000409894 SDSP20132 328 aa10.52□□□□□ -0.73
POLR1B-203ENST00000409894 TYRO3Q06418 890 aa10.52□□□□□ -0.73
POLR1B-203ENST00000409894 ZGPATQ8N5A5 531 aaKnown RBP10.52□□□□□ -0.73
POLR1B-203ENST00000409894 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.52□□□□□ -0.73
POLR1B-203ENST00000409894 GPRASP1Q5JY77 1395 aa10.52□□□□□ -0.73
POLR1B-203ENST00000409894 GOLGA8BA8MQT2 603 aa10.52□□□□□ -0.73
POLR1B-203ENST00000409894 SYT1P21579 422 aa10.52□□□□□ -0.73
POLR1B-203ENST00000409894 GIGYF2Q6Y7W6 1299 aaKnown RBP10.52□□□□□ -0.73
POLR1B-203ENST00000409894 SMC5Q8IY18 1101 aa10.52□□□□□ -0.73
POLR1B-203ENST00000409894 AFAP1Q8N556 730 aa10.52□□□□□ -0.73
POLR1B-203ENST00000409894 NOP2P46087 812 aaKnown RBP10.51□□□□□ -0.73
POLR1B-203ENST00000409894 GBP6Q6ZN66 633 aa10.51□□□□□ -0.73
POLR1B-203ENST00000409894 C17orf53Q8N3J3 647 aaPredicted RBP10.51□□□□□ -0.73
POLR1B-203ENST00000409894 CTNNBL1Q8WYA6 563 aaPredicted RBP10.51□□□□□ -0.73
POLR1B-203ENST00000409894 FYCO1Q9BQS8 1478 aa10.51□□□□□ -0.73
POLR1B-203ENST00000409894 KRBA2Q6ZNG9 492 aa10.51□□□□□ -0.73
POLR1B-203ENST00000409894 GOLGA1Q92805 767 aa10.51□□□□□ -0.73
POLR1B-203ENST00000409894 AIDAQ96BJ3 306 aa10.51□□□□□ -0.73
POLR1B-203ENST00000409894 DRC1Q96MC2 740 aa10.51□□□□□ -0.73
POLR1B-203ENST00000409894 ORC3Q9UBD5 711 aaPredicted RBP10.51□□□□□ -0.73
POLR1B-203ENST00000409894 RIOK3O14730 519 aaKnown RBP10.51□□□□□ -0.73
POLR1B-203ENST00000409894 RAPGEF3O95398 923 aa10.51□□□□□ -0.73
POLR1B-203ENST00000409894 CETN2P41208 172 aa10.51□□□□□ -0.73
POLR1B-203ENST00000409894 CCDC96Q2M329 555 aa10.51□□□□□ -0.73
POLR1B-203ENST00000409894 TSC1Q92574 1164 aa10.51□□□□□ -0.73
POLR1B-203ENST00000409894 HMGB1P09429 215 aaKnown RBP10.5□□□□□ -0.73
POLR1B-203ENST00000409894 CCDC6Q16204 474 aa10.5□□□□□ -0.73
POLR1B-203ENST00000409894 CDK19Q9BWU1 502 aa10.5□□□□□ -0.73
POLR1B-203ENST00000409894 NSD3Q9BZ95 1437 aa10.5□□□□□ -0.73
POLR1B-203ENST00000409894 MPHOSPH8Q99549 860 aa10.5□□□□□ -0.73
POLR1B-203ENST00000409894 GNL3LQ9NVN8 582 aaKnown RBP10.5□□□□□ -0.73
POLR1B-203ENST00000409894 PUF60Q9UHX1 559 aaKnown RBP10.5□□□□□ -0.73
POLR1B-203ENST00000409894 USP16Q9Y5T5 823 aa10.5□□□□□ -0.73
POLR1B-203ENST00000409894 HMGXB3Q12766 1538 aa10.5□□□□□ -0.73
POLR1B-203ENST00000409894 RHOXF2BP0C7M4 288 aa10.5□□□□□ -0.73
POLR1B-203ENST00000409894 NUCB1Q02818 461 aa10.5□□□□□ -0.73
POLR1B-203ENST00000409894 RAB11FIP4Q86YS3 637 aa10.5□□□□□ -0.73
POLR1B-203ENST00000409894 SCLT1Q96NL6 688 aa10.5□□□□□ -0.73
POLR1B-203ENST00000409894 RHOXF2Q9BQY4 288 aa10.5□□□□□ -0.73
POLR1B-203ENST00000409894 TOPBP1Q92547 1522 aa10.5□□□□□ -0.73
POLR1B-203ENST00000409894 PLEKHH2Q8IVE3 1493 aa10.5□□□□□ -0.73
POLR1B-203ENST00000409894 TAF7Q15545 349 aaPredicted RBP10.5□□□□□ -0.73
POLR1B-203ENST00000409894 NBPF11Q86T75 865 aa10.5□□□□□ -0.73
POLR1B-203ENST00000409894 SERPINA10Q9UK55 444 aa10.5□□□□□ -0.73
POLR1B-203ENST00000409894 POLA1P09884 1462 aaPredicted RBP10.49□□□□□ -0.73
POLR1B-203ENST00000409894 SYKP43405 635 aa10.49□□□□□ -0.73
POLR1B-203ENST00000409894 PIP4K2BP78356 416 aa10.49□□□□□ -0.73
POLR1B-203ENST00000409894 HDAC1Q13547 482 aaPredicted RBP10.49□□□□□ -0.73
POLR1B-203ENST00000409894 KARSQ15046 597 aaKnown RBP10.49□□□□□ -0.73
POLR1B-203ENST00000409894 CCDC114Q96M63 670 aa10.49□□□□□ -0.73
POLR1B-203ENST00000409894 CASKIN1Q8WXD9 1431 aa10.49□□□□□ -0.73
POLR1B-203ENST00000409894 NAA25Q14CX7 972 aa10.49□□□□□ -0.73
POLR1B-203ENST00000409894 KIF6Q6ZMV9 814 aa10.49□□□□□ -0.73
POLR1B-203ENST00000409894 MYRIPQ8NFW9 859 aa10.49□□□□□ -0.73
POLR1B-203ENST00000409894 BRF1Q92994 677 aa10.49□□□□□ -0.73
POLR1B-203ENST00000409894 CEP63Q96MT8 703 aa10.49□□□□□ -0.73
POLR1B-203ENST00000409894 ECHDC1Q9NTX5 307 aa10.49□□□□□ -0.73
POLR1B-203ENST00000409894 LRP2BPQ9P2M1 347 aa10.49□□□□□ -0.73
POLR1B-203ENST00000409894 ABCF2Q9UG63 623 aa10.49□□□□□ -0.73
POLR1B-203ENST00000409894 CCDC196A0A1B0GTZ2 297 aa10.49□□□□□ -0.73
POLR1B-203ENST00000409894 A0A1B0GUL7 405 aa10.49□□□□□ -0.73
POLR1B-203ENST00000409894 MINDY4BA8MYZ0 360 aa10.49□□□□□ -0.73
POLR1B-203ENST00000409894 PPP1R12BO60237 982 aaPredicted RBP10.49□□□□□ -0.73
POLR1B-203ENST00000409894 F13A1P00488 732 aa10.49□□□□□ -0.73
POLR1B-203ENST00000409894 IDEP14735 1019 aa10.49□□□□□ -0.73
POLR1B-203ENST00000409894 USP5P45974 858 aa10.49□□□□□ -0.73
POLR1B-203ENST00000409894 CKAP4Q07065 602 aaKnown RBP10.49□□□□□ -0.73
POLR1B-203ENST00000409894 CCDC121Q6ZUS5 278 aa10.49□□□□□ -0.73
POLR1B-203ENST00000409894 UBA5Q9GZZ9 404 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms