RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 FBXO18Q8NFZ0 1043 aa6.87□□□□□ -1.31
R3HDM1-202ENST00000409478 SCAND2PQ9GZW5 306 aaPredicted RBP6.87□□□□□ -1.31
R3HDM1-202ENST00000409478 SH2B1Q9NRF2 756 aaPredicted RBP6.87□□□□□ -1.31
R3HDM1-202ENST00000409478 SALL3Q9BXA9 1300 aa6.87□□□□□ -1.31
R3HDM1-202ENST00000409478 A0A1W2PP64 1363 aa6.87□□□□□ -1.31
R3HDM1-202ENST00000409478 ABCC1P33527 1531 aa6.87□□□□□ -1.31
R3HDM1-202ENST00000409478 A0A1B0GUL7 405 aa6.87□□□□□ -1.31
R3HDM1-202ENST00000409478 CCDC69A6NI79 296 aa6.87□□□□□ -1.31
R3HDM1-202ENST00000409478 ELL2O00472 640 aaPredicted RBP6.87□□□□□ -1.31
R3HDM1-202ENST00000409478 GJB2P29033 226 aa6.87□□□□□ -1.31
R3HDM1-202ENST00000409478 CAMK4Q16566 473 aa6.87□□□□□ -1.31
R3HDM1-202ENST00000409478 ARHGAP29Q52LW3 1261 aa6.87□□□□□ -1.31
R3HDM1-202ENST00000409478 CCDC93Q567U6 631 aa6.87□□□□□ -1.31
R3HDM1-202ENST00000409478 RILPL2Q969X0 211 aa6.87□□□□□ -1.31
R3HDM1-202ENST00000409478 NCAPGQ9BPX3 1015 aa6.87□□□□□ -1.31
R3HDM1-202ENST00000409478 UBXN6Q9BZV1 441 aa6.87□□□□□ -1.31
R3HDM1-202ENST00000409478 NRDCO43847 1150 aa6.87□□□□□ -1.31
R3HDM1-202ENST00000409478 IVLP07476 585 aa6.87□□□□□ -1.31
R3HDM1-202ENST00000409478 AK2P54819 239 aa6.87□□□□□ -1.31
R3HDM1-202ENST00000409478 GGNBP2Q9H3C7 697 aa6.87□□□□□ -1.31
R3HDM1-202ENST00000409478 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.87□□□□□ -1.314e-7■□□□□ 10.4
R3HDM1-202ENST00000409478 NPHP3Q7Z494 1330 aa6.87□□□□□ -1.31
R3HDM1-202ENST00000409478 ADGRB3O60242 1522 aa6.87□□□□□ -1.31
R3HDM1-202ENST00000409478 CCP110O43303 1012 aa6.87□□□□□ -1.31
R3HDM1-202ENST00000409478 GUCY2CP25092 1073 aa6.87□□□□□ -1.31
R3HDM1-202ENST00000409478 KCNJ6P48051 423 aa6.87□□□□□ -1.31
R3HDM1-202ENST00000409478 CCZ1BP86790 482 aa6.87□□□□□ -1.31
R3HDM1-202ENST00000409478 CCZ1P86791 482 aaPredicted RBP6.87□□□□□ -1.31
R3HDM1-202ENST00000409478 CKAP2LQ8IYA6 745 aa6.87□□□□□ -1.31
R3HDM1-202ENST00000409478 UBXN4Q92575 508 aa6.87□□□□□ -1.31
R3HDM1-202ENST00000409478 SMARCE1Q969G3 411 aa6.87□□□□□ -1.31
R3HDM1-202ENST00000409478 EXOC4Q96A65 974 aa6.87□□□□□ -1.31
R3HDM1-202ENST00000409478 LRRCC1Q9C099 1032 aa6.87□□□□□ -1.31
R3HDM1-202ENST00000409478 DACT1Q9NYF0 836 aa6.87□□□□□ -1.31
R3HDM1-202ENST00000409478 TUBGCP6Q96RT7 1819 aa6.87□□□□□ -1.31
R3HDM1-202ENST00000409478 MROH2AA6NES4 1674 aa6.86□□□□□ -1.31
R3HDM1-202ENST00000409478 PSDA5PKW4 1024 aaPredicted RBP6.86□□□□□ -1.31
R3HDM1-202ENST00000409478 POLR3GO15318 223 aaPredicted RBP6.86□□□□□ -1.31
R3HDM1-202ENST00000409478 C8orf58Q8NAV2 365 aa6.86□□□□□ -1.31
R3HDM1-202ENST00000409478 STAP2Q9UGK3 403 aa6.86□□□□□ -1.31
R3HDM1-202ENST00000409478 NPHP1O15259 732 aa6.86□□□□□ -1.31
R3HDM1-202ENST00000409478 RUFY3Q7L099 469 aa6.86□□□□□ -1.31
R3HDM1-202ENST00000409478 NFATC2IPQ8NCF5 419 aa6.86□□□□□ -1.31
R3HDM1-202ENST00000409478 ATG3Q9NT62 314 aa6.86□□□□□ -1.31
R3HDM1-202ENST00000409478 TERF2IPQ9NYB0 399 aa6.86□□□□□ -1.31
R3HDM1-202ENST00000409478 IMPACTQ9P2X3 320 aa6.86□□□□□ -1.31
R3HDM1-202ENST00000409478 ORC3Q9UBD5 711 aaPredicted RBP6.86□□□□□ -1.31
R3HDM1-202ENST00000409478 HDAC5Q9UQL6 1122 aa6.86□□□□□ -1.31
R3HDM1-202ENST00000409478 RRP15Q9Y3B9 282 aaKnown RBP6.86□□□□□ -1.31
R3HDM1-202ENST00000409478 TTC21AQ8NDW8 1320 aa6.86□□□□□ -1.31
R3HDM1-202ENST00000409478 ADGRL3Q9HAR2 1447 aa6.86□□□□□ -1.31
R3HDM1-202ENST00000409478 FRMPD1Q5SYB0 1578 aa6.86□□□□□ -1.31
R3HDM1-202ENST00000409478 UGGT1Q9NYU2 1555 aa6.86□□□□□ -1.31
R3HDM1-202ENST00000409478 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.86□□□□□ -1.31
R3HDM1-202ENST00000409478 SOX12O15370 315 aa6.86□□□□□ -1.31
R3HDM1-202ENST00000409478 LIG1P18858 919 aa6.86□□□□□ -1.31
R3HDM1-202ENST00000409478 CASTP20810 708 aaKnown RBP6.86□□□□□ -1.31
R3HDM1-202ENST00000409478 PDCP20941 246 aa6.86□□□□□ -1.31
R3HDM1-202ENST00000409478 BRD2P25440 801 aaKnown RBP6.86□□□□□ -1.31
R3HDM1-202ENST00000409478 PSEN1P49768 467 aa6.86□□□□□ -1.31
R3HDM1-202ENST00000409478 TTC6Q86TZ1 520 aa6.86□□□□□ -1.31
R3HDM1-202ENST00000409478 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.86□□□□□ -1.31
R3HDM1-202ENST00000409478 DNAJC25Q9H1X3 360 aa6.86□□□□□ -1.31
R3HDM1-202ENST00000409478 TRMT1Q9NXH9 659 aaKnown RBP6.86□□□□□ -1.31
R3HDM1-202ENST00000409478 CDK12Q9NYV4 1490 aaPredicted RBP6.86□□□□□ -1.31
R3HDM1-202ENST00000409478 ZFYVE16Q7Z3T8 1539 aa6.85□□□□□ -1.31
R3HDM1-202ENST00000409478 VPS37CA5D8V6 355 aaPredicted RBP6.85□□□□□ -1.31
R3HDM1-202ENST00000409478 OAS2P29728 719 aaKnown RBP6.85□□□□□ -1.31
R3HDM1-202ENST00000409478 TTC31Q49AM3 519 aaPredicted RBP6.85□□□□□ -1.31
R3HDM1-202ENST00000409478 CCDC158Q5M9N0 1113 aa6.85□□□□□ -1.31
R3HDM1-202ENST00000409478 RNF216Q9NWF9 866 aaPredicted RBP6.85□□□□□ -1.31
R3HDM1-202ENST00000409478 SNX14Q9Y5W7 946 aa6.85□□□□□ -1.31
R3HDM1-202ENST00000409478 PLEKHG2Q9H7P9 1386 aa6.85□□□□□ -1.31
R3HDM1-202ENST00000409478 FYB1O15117 783 aa6.85□□□□□ -1.31
R3HDM1-202ENST00000409478 APPP05067 770 aa6.85□□□□□ -1.31
R3HDM1-202ENST00000409478 FAM69CQ0P6D2 419 aa6.85□□□□□ -1.31
R3HDM1-202ENST00000409478 LEKR1Q6ZMV7 388 aa6.85□□□□□ -1.31
R3HDM1-202ENST00000409478 MEIS3Q99687 375 aa6.85□□□□□ -1.31
R3HDM1-202ENST00000409478 PHLPP2Q6ZVD8 1323 aa6.85□□□□□ -1.31
R3HDM1-202ENST00000409478 RIMS2Q9UQ26 1411 aa6.85□□□□□ -1.31
R3HDM1-202ENST00000409478 ZCCHC11Q5TAX3 1644 aaKnown RBP6.85□□□□□ -1.31
R3HDM1-202ENST00000409478 EFCAB8A8MWE9 144 aa6.85□□□□□ -1.31
R3HDM1-202ENST00000409478 TRIM66O15016 1216 aa6.85□□□□□ -1.31
R3HDM1-202ENST00000409478 MAGEA9P43362 315 aa6.85□□□□□ -1.31
R3HDM1-202ENST00000409478 VPS53Q5VIR6 699 aa6.85□□□□□ -1.31
R3HDM1-202ENST00000409478 CCDC150Q8NCX0 1101 aa6.85□□□□□ -1.31
R3HDM1-202ENST00000409478 MNS1Q8NEH6 495 aa6.85□□□□□ -1.31
R3HDM1-202ENST00000409478 ZNF622Q969S3 477 aaKnown RBP eCLIP6.85□□□□□ -1.312e-6■■□□□ 13.9
R3HDM1-202ENST00000409478 JRKLQ9Y4A0 524 aa6.85□□□□□ -1.31
R3HDM1-202ENST00000409478 CTAGE5O15320 804 aa6.84□□□□□ -1.31
R3HDM1-202ENST00000409478 ACTN2P35609 894 aa6.84□□□□□ -1.31
R3HDM1-202ENST00000409478 ST5P78524 1137 aa6.84□□□□□ -1.31
R3HDM1-202ENST00000409478 SMC1AQ14683 1233 aaKnown RBP6.84□□□□□ -1.31
R3HDM1-202ENST00000409478 STX1AQ16623 288 aa6.84□□□□□ -1.31
R3HDM1-202ENST00000409478 RPGRIP1LQ68CZ1 1315 aa6.84□□□□□ -1.31
R3HDM1-202ENST00000409478 SPATA32Q96LK8 384 aa6.84□□□□□ -1.31
R3HDM1-202ENST00000409478 THUMPD2Q9BTF0 503 aaKnown RBP6.84□□□□□ -1.31
R3HDM1-202ENST00000409478 DEF6Q9H4E7 631 aa6.84□□□□□ -1.31
R3HDM1-202ENST00000409478 PPP6R1Q9UPN7 881 aa6.84□□□□□ -1.31
R3HDM1-202ENST00000409478 EFCAB6Q5THR3 1501 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms