RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 NECTIN2Q92692 538 aa16.58■□□□□ 0.24
LIMS2-203ENST00000409254 ZNF652Q9Y2D9 606 aa16.58■□□□□ 0.24
LIMS2-203ENST00000409254 ABCC4O15439 1325 aa16.58■□□□□ 0.24
LIMS2-203ENST00000409254 NRXN2Q9P2S2 1712 aa16.57■□□□□ 0.24
LIMS2-203ENST00000409254 ADCY9O60503 1353 aa16.57■□□□□ 0.24
LIMS2-203ENST00000409254 USP42Q9H9J4 1324 aaKnown RBP16.57■□□□□ 0.24
LIMS2-203ENST00000409254 KCNQ4P56696 695 aa16.57■□□□□ 0.24
LIMS2-203ENST00000409254 ZNF827Q17R98 1081 aa16.57■□□□□ 0.24
LIMS2-203ENST00000409254 ANKRD13DQ6ZTN6 518 aa16.57■□□□□ 0.24
LIMS2-203ENST00000409254 COPS6Q7L5N1 327 aa16.57■□□□□ 0.24
LIMS2-203ENST00000409254 DZIP3Q86Y13 1208 aaKnown RBP16.57■□□□□ 0.24
LIMS2-203ENST00000409254 XAGE3Q8WTP9 111 aa16.57■□□□□ 0.24
LIMS2-203ENST00000409254 BCL2L13Q9BXK5 485 aa16.57■□□□□ 0.24
LIMS2-203ENST00000409254 NARFQ9UHQ1 456 aa16.57■□□□□ 0.24
LIMS2-203ENST00000409254 RRP1P56182 461 aaKnown RBP16.56■□□□□ 0.24
LIMS2-203ENST00000409254 TRAPPC3LQ5T215 181 aa16.56■□□□□ 0.24
LIMS2-203ENST00000409254 GIGYF2Q6Y7W6 1299 aaKnown RBP16.56■□□□□ 0.24
LIMS2-203ENST00000409254 PHAXQ9H814 394 aaKnown RBP16.56■□□□□ 0.24
LIMS2-203ENST00000409254 ANO8Q9HCE9 1232 aaPredicted RBP16.56■□□□□ 0.24
LIMS2-203ENST00000409254 TFCP2L1Q9NZI6 479 aa16.56■□□□□ 0.24
LIMS2-203ENST00000409254 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.55■□□□□ 0.24
LIMS2-203ENST00000409254 TRIM27P14373 513 aa16.55■□□□□ 0.24
LIMS2-203ENST00000409254 NOB1Q9ULX3 412 aaKnown RBP16.55■□□□□ 0.24
LIMS2-203ENST00000409254 PNPLA7Q6ZV29 1317 aa16.54■□□□□ 0.24
LIMS2-203ENST00000409254 CAMTA2O94983 1202 aa16.54■□□□□ 0.24
LIMS2-203ENST00000409254 ANXA1P04083 346 aa16.54■□□□□ 0.24
LIMS2-203ENST00000409254 RFC4P35249 363 aa16.54■□□□□ 0.24
LIMS2-203ENST00000409254 TRIM28Q13263 835 aaKnown RBP16.54■□□□□ 0.24
LIMS2-203ENST00000409254 G2E3Q7L622 706 aa16.54■□□□□ 0.24
LIMS2-203ENST00000409254 SLC16A10Q8TF71 515 aa16.54■□□□□ 0.24
LIMS2-203ENST00000409254 DNAAF4Q8WXU2 420 aa16.54■□□□□ 0.24
LIMS2-203ENST00000409254 ARHGEF1Q92888 912 aaKnown RBP16.54■□□□□ 0.24
LIMS2-203ENST00000409254 PI4KAP2A4QPH2 592 aa16.53■□□□□ 0.24
LIMS2-203ENST00000409254 ZPR1O75312 459 aa16.53■□□□□ 0.24
LIMS2-203ENST00000409254 CCT4P50991 539 aaKnown RBP16.53■□□□□ 0.24
LIMS2-203ENST00000409254 NEXNQ0ZGT2 675 aa16.53■□□□□ 0.24
LIMS2-203ENST00000409254 TTLL7Q6ZT98 887 aa16.53■□□□□ 0.24
LIMS2-203ENST00000409254 PI4KAP1Q8N8J0 262 aa16.53■□□□□ 0.24
LIMS2-203ENST00000409254 METTL22Q9BUU2 404 aaPredicted RBP16.53■□□□□ 0.24
LIMS2-203ENST00000409254 TCERG1O14776 1098 aaKnown RBP16.52■□□□□ 0.24
LIMS2-203ENST00000409254 PIP4K2AP48426 406 aaPredicted RBP16.52■□□□□ 0.24
LIMS2-203ENST00000409254 INTS3Q68E01 1043 aaKnown RBP16.52■□□□□ 0.24
LIMS2-203ENST00000409254 RIC3Q7Z5B4 369 aa16.52■□□□□ 0.24
LIMS2-203ENST00000409254 FTSJ3Q8IY81 847 aaKnown RBP16.52■□□□□ 0.24
LIMS2-203ENST00000409254 DZIP1LQ8IYY4 767 aaKnown RBP16.52■□□□□ 0.24
LIMS2-203ENST00000409254 LINS1Q8NG48 757 aa16.52■□□□□ 0.24
LIMS2-203ENST00000409254 CHMP4BQ9H444 224 aaKnown RBP16.52■□□□□ 0.24
LIMS2-203ENST00000409254 KIF13BQ9NQT8 1826 aa16.52■□□□□ 0.23
LIMS2-203ENST00000409254 ALDH1L1O75891 902 aa16.51■□□□□ 0.23
LIMS2-203ENST00000409254 AIMP1Q12904 312 aaKnown RBP16.51■□□□□ 0.23
LIMS2-203ENST00000409254 AAMPQ13685 434 aa16.51■□□□□ 0.23
LIMS2-203ENST00000409254 PARP10Q53GL7 1025 aa16.51■□□□□ 0.23
LIMS2-203ENST00000409254 FRAT1Q92837 279 aaPredicted RBP16.51■□□□□ 0.23
LIMS2-203ENST00000409254 MAP3K2Q9Y2U5 619 aa16.51■□□□□ 0.23
LIMS2-203ENST00000409254 ZNF330Q9Y3S2 320 aaPredicted RBP16.51■□□□□ 0.23
LIMS2-203ENST00000409254 RIC1Q4ADV7 1423 aa16.51■□□□□ 0.23
LIMS2-203ENST00000409254 TCIRG1Q13488 830 aa16.5■□□□□ 0.23
LIMS2-203ENST00000409254 AMIGO3Q86WK7 504 aa16.5■□□□□ 0.23
LIMS2-203ENST00000409254 CCDC191Q8NCU4 936 aa16.5■□□□□ 0.23
LIMS2-203ENST00000409254 CARMIL3Q8ND23 1372 aa16.5■□□□□ 0.23
LIMS2-203ENST00000409254 DDX60Q8IY21 1712 aaKnown RBP16.49■□□□□ 0.23
LIMS2-203ENST00000409254 NLGN1Q8N2Q7 840 aa16.49■□□□□ 0.23
LIMS2-203ENST00000409254 ISCA1Q9BUE6 129 aa16.49■□□□□ 0.23
LIMS2-203ENST00000409254 TBC1D2BQ9UPU7 963 aa16.49■□□□□ 0.23
LIMS2-203ENST00000409254 PHF14O94880 888 aa16.48■□□□□ 0.23
LIMS2-203ENST00000409254 GYS1P13807 737 aa16.48■□□□□ 0.23
LIMS2-203ENST00000409254 BEND3Q5T5X7 828 aa16.48■□□□□ 0.23
LIMS2-203ENST00000409254 COL23A1Q86Y22 540 aaPredicted RBP16.48■□□□□ 0.23
LIMS2-203ENST00000409254 SRCIN1Q9C0H9 1055 aa16.48■□□□□ 0.23
LIMS2-203ENST00000409254 ZBTB3Q9H5J0 574 aa16.48■□□□□ 0.23
LIMS2-203ENST00000409254 HDAC5Q9UQL6 1122 aa16.48■□□□□ 0.23
LIMS2-203ENST00000409254 SUPT16HQ9Y5B9 1047 aaKnown RBP16.48■□□□□ 0.23
LIMS2-203ENST00000409254 ZNF34Q8IZ26 560 aa16.47■□□□□ 0.23
LIMS2-203ENST00000409254 DDX19BQ9UMR2 479 aa16.47■□□□□ 0.23
LIMS2-203ENST00000409254 UTYO14607 1347 aa16.46■□□□□ 0.23
LIMS2-203ENST00000409254 NEURL1BA8MQ27 555 aa16.46■□□□□ 0.23
LIMS2-203ENST00000409254 HSP90B1P14625 803 aaKnown RBP16.46■□□□□ 0.23
LIMS2-203ENST00000409254 MVPQ14764 893 aaKnown RBP16.46■□□□□ 0.23
LIMS2-203ENST00000409254 USPL1Q5W0Q7 1092 aa16.46■□□□□ 0.23
LIMS2-203ENST00000409254 BCL2L12Q9HB09 334 aa16.46■□□□□ 0.23
LIMS2-203ENST00000409254 F6X3S4 739 aa16.45■□□□□ 0.22
LIMS2-203ENST00000409254 IGKV5-2P06315 115 aa16.45■□□□□ 0.22
LIMS2-203ENST00000409254 HLFQ16534 295 aa16.45■□□□□ 0.22
LIMS2-203ENST00000409254 NYXQ9GZU5 481 aa16.45■□□□□ 0.22
LIMS2-203ENST00000409254 CWC25Q9NXE8 425 aaPredicted RBP16.45■□□□□ 0.22
LIMS2-203ENST00000409254 DLEC1Q9Y238 1755 aa16.45■□□□□ 0.22
LIMS2-203ENST00000409254 ANKRD31Q8N7Z5 1873 aa16.44■□□□□ 0.22
LIMS2-203ENST00000409254 PPP1R42Q7Z4L9 355 aa16.44■□□□□ 0.22
LIMS2-203ENST00000409254 MYD88Q99836 296 aa16.44■□□□□ 0.22
LIMS2-203ENST00000409254 GNAI3P08754 354 aa16.43■□□□□ 0.22
LIMS2-203ENST00000409254 RLBP1P12271 317 aa16.43■□□□□ 0.22
LIMS2-203ENST00000409254 GCKRQ14397 625 aa16.43■□□□□ 0.22
LIMS2-203ENST00000409254 SLC4A10Q6U841 1118 aa16.43■□□□□ 0.22
LIMS2-203ENST00000409254 NLRP10Q86W26 655 aa16.43■□□□□ 0.22
LIMS2-203ENST00000409254 TMEM57Q8N5G2 664 aa16.43■□□□□ 0.22
LIMS2-203ENST00000409254 ARXQ96QS3 562 aa16.43■□□□□ 0.22
LIMS2-203ENST00000409254 SETDB2Q96T68 719 aa16.43■□□□□ 0.22
LIMS2-203ENST00000409254 SRP68Q9UHB9 627 aaKnown RBP16.43■□□□□ 0.22
LIMS2-203ENST00000409254 NIP7Q9Y221 180 aaKnown RBP eCLIP16.43■□□□□ 0.22
LIMS2-203ENST00000409254 UBN2Q6ZU65 1347 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms