RNA–Protein interactions for RNA: ENST00000409102.5

TMEM139-202, Transcript of transmembrane protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM139, Length 1,226 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139-202ENST00000409102 ZNF496Q96IT1 587 aaPredicted RBP11.26□□□□□ -0.61
TMEM139-202ENST00000409102 ZNF219Q9P2Y4 722 aaPredicted RBP11.26□□□□□ -0.61
TMEM139-202ENST00000409102 MKRN1Q9UHC7 482 aaKnown RBP11.26□□□□□ -0.61
TMEM139-202ENST00000409102 SOGA3Q5TF21 947 aa11.25□□□□□ -0.61
TMEM139-202ENST00000409102 STYK1Q6J9G0 422 aa11.25□□□□□ -0.61
TMEM139-202ENST00000409102 PRPF40BQ6NWY9 871 aaKnown RBP11.25□□□□□ -0.61
TMEM139-202ENST00000409102 CCDC24Q8N4L8 307 aa11.25□□□□□ -0.61
TMEM139-202ENST00000409102 CNBD1Q8NA66 436 aa11.25□□□□□ -0.61
TMEM139-202ENST00000409102 CNKSR1Q969H4 720 aa11.25□□□□□ -0.61
TMEM139-202ENST00000409102 TEX13AQ9BXU3 409 aaPredicted RBP11.25□□□□□ -0.61
TMEM139-202ENST00000409102 PASKQ96RG2 1323 aa11.25□□□□□ -0.61
TMEM139-202ENST00000409102 ADAMTSL1Q8N6G6 1762 aa11.25□□□□□ -0.61
TMEM139-202ENST00000409102 IQCA1LA6NCM1 817 aa11.24□□□□□ -0.61
TMEM139-202ENST00000409102 DIAPH1O60610 1272 aaKnown RBP11.24□□□□□ -0.61
TMEM139-202ENST00000409102 DDNO94850 711 aaPredicted RBP11.24□□□□□ -0.61
TMEM139-202ENST00000409102 CAMTA2O94983 1202 aa11.24□□□□□ -0.61
TMEM139-202ENST00000409102 SRGNP10124 158 aa11.24□□□□□ -0.61
TMEM139-202ENST00000409102 ZNF790Q6PG37 636 aa11.24□□□□□ -0.61
TMEM139-202ENST00000409102 LDHDQ86WU2 507 aa11.24□□□□□ -0.61
TMEM139-202ENST00000409102 L3MBTL3Q96JM7 780 aaPredicted RBP11.24□□□□□ -0.61
TMEM139-202ENST00000409102 TBC1D2BQ9UPU7 963 aa11.24□□□□□ -0.61
TMEM139-202ENST00000409102 FOXN1O15353 648 aa11.23□□□□□ -0.61
TMEM139-202ENST00000409102 ST5P78524 1137 aa11.23□□□□□ -0.61
TMEM139-202ENST00000409102 TEFQ10587 303 aa11.23□□□□□ -0.61
TMEM139-202ENST00000409102 SETDB2Q96T68 719 aa11.23□□□□□ -0.61
TMEM139-202ENST00000409102 PRDM10Q9NQV6 1147 aa11.23□□□□□ -0.61
TMEM139-202ENST00000409102 ZNF330Q9Y3S2 320 aaPredicted RBP11.23□□□□□ -0.61
TMEM139-202ENST00000409102 IL17REQ8NFR9 667 aa11.22□□□□□ -0.61
TMEM139-202ENST00000409102 CEMIPQ8WUJ3 1361 aa11.22□□□□□ -0.61
TMEM139-202ENST00000409102 C7orf43Q8WVR3 580 aa11.22□□□□□ -0.61
TMEM139-202ENST00000409102 MASTLQ96GX5 879 aa11.22□□□□□ -0.61
TMEM139-202ENST00000409102 FMNL2Q96PY5 1086 aa11.22□□□□□ -0.61
TMEM139-202ENST00000409102 MYBBP1AQ9BQG0 1328 aaKnown RBP11.22□□□□□ -0.61
TMEM139-202ENST00000409102 TAF1DQ9H5J8 278 aaPredicted RBP11.22□□□□□ -0.61
TMEM139-202ENST00000409102 GNAT3A8MTJ3 354 aa11.21□□□□□ -0.61
TMEM139-202ENST00000409102 NPHP1O15259 732 aa11.21□□□□□ -0.61
TMEM139-202ENST00000409102 A1BGP04217 495 aa11.21□□□□□ -0.61
TMEM139-202ENST00000409102 CCDC93Q567U6 631 aa11.21□□□□□ -0.61
TMEM139-202ENST00000409102 GAS2L2Q8NHY3 880 aa11.21□□□□□ -0.61
TMEM139-202ENST00000409102 ZNF541Q9H0D2 1346 aa11.2□□□□□ -0.62
TMEM139-202ENST00000409102 TMEM88BA6NKF7 163 aa11.2□□□□□ -0.62
TMEM139-202ENST00000409102 ITGBL1O95965 494 aaPredicted RBP11.2□□□□□ -0.62
TMEM139-202ENST00000409102 NEFLP07196 543 aa11.2□□□□□ -0.62
TMEM139-202ENST00000409102 CTCFP49711 727 aaPredicted RBP11.2□□□□□ -0.62
TMEM139-202ENST00000409102 VEGFBP49765 207 aa11.2□□□□□ -0.62
TMEM139-202ENST00000409102 NPM2Q86SE8 214 aaKnown RBP11.2□□□□□ -0.62
TMEM139-202ENST00000409102 DZIP3Q86Y13 1208 aaKnown RBP11.2□□□□□ -0.62
TMEM139-202ENST00000409102 AIDAQ96BJ3 306 aa11.2□□□□□ -0.62
TMEM139-202ENST00000409102 THSD7BQ9C0I4 1608 aa11.2□□□□□ -0.62
TMEM139-202ENST00000409102 KLRG2A4D1S0 409 aaPredicted RBP11.19□□□□□ -0.62
TMEM139-202ENST00000409102 FKBP4Q02790 459 aaKnown RBP eCLIP11.19□□□□□ -0.62
TMEM139-202ENST00000409102 CLEC4GQ6UXB4 293 aa11.19□□□□□ -0.62
TMEM139-202ENST00000409102 NBPF5PQ86XG9 351 aaPredicted RBP11.19□□□□□ -0.62
TMEM139-202ENST00000409102 SNED1Q8TER0 1413 aa11.18□□□□□ -0.62
TMEM139-202ENST00000409102 RASSF10A6NK89 507 aa11.18□□□□□ -0.62
TMEM139-202ENST00000409102 RGL2O15211 777 aa11.18□□□□□ -0.62
TMEM139-202ENST00000409102 NPR1P16066 1061 aa11.18□□□□□ -0.62
TMEM139-202ENST00000409102 WBP1LQ9NX94 342 aa11.18□□□□□ -0.62
TMEM139-202ENST00000409102 HACL1Q9UJ83 578 aa11.18□□□□□ -0.62
TMEM139-202ENST00000409102 ZNF652Q9Y2D9 606 aa11.18□□□□□ -0.62
TMEM139-202ENST00000409102 BTBD11A6QL63 1104 aa11.17□□□□□ -0.62
TMEM139-202ENST00000409102 U2SURPO15042 1029 aaKnown RBP11.17□□□□□ -0.62
TMEM139-202ENST00000409102 KCNQ3O43525 872 aa11.17□□□□□ -0.62
TMEM139-202ENST00000409102 EPHX2P34913 555 aa11.17□□□□□ -0.62
TMEM139-202ENST00000409102 EAPPQ56P03 285 aaPredicted RBP11.17□□□□□ -0.62
TMEM139-202ENST00000409102 ZNF277Q9NRM2 450 aaPredicted RBP11.17□□□□□ -0.62
TMEM139-202ENST00000409102 LAMB4A4D0S4 1761 aa11.16□□□□□ -0.62
TMEM139-202ENST00000409102 PIP4K2AP48426 406 aaPredicted RBP11.16□□□□□ -0.62
TMEM139-202ENST00000409102 OLFM4Q6UX06 510 aa11.16□□□□□ -0.62
TMEM139-202ENST00000409102 PNMA8AQ86V59 439 aaPredicted RBP11.16□□□□□ -0.62
TMEM139-202ENST00000409102 RTKN2Q8IZC4 609 aa11.16□□□□□ -0.62
TMEM139-202ENST00000409102 USP16Q9Y5T5 823 aa11.16□□□□□ -0.62
TMEM139-202ENST00000409102 LTBP1Q14766 1721 aa11.15□□□□□ -0.62
TMEM139-202ENST00000409102 RNF123Q5XPI4 1314 aa11.15□□□□□ -0.62
TMEM139-202ENST00000409102 TNRC18O15417 2968 aaPredicted RBP11.15□□□□□ -0.62
TMEM139-202ENST00000409102 FZD9O00144 591 aa11.15□□□□□ -0.62
TMEM139-202ENST00000409102 HSPA8P11142 646 aaKnown RBP11.15□□□□□ -0.62
TMEM139-202ENST00000409102 IARSP41252 1262 aaKnown RBP11.15□□□□□ -0.62
TMEM139-202ENST00000409102 LBX1P52954 281 aa11.15□□□□□ -0.62
TMEM139-202ENST00000409102 ERICH6BQ5W0A0 696 aa11.15□□□□□ -0.62
TMEM139-202ENST00000409102 TPTE2Q6XPS3 522 aa11.15□□□□□ -0.62
TMEM139-202ENST00000409102 GPC2Q8N158 579 aa11.15□□□□□ -0.62
TMEM139-202ENST00000409102 PNISRQ8TF01 805 aaKnown RBP11.15□□□□□ -0.62
TMEM139-202ENST00000409102 CLEC11AQ9Y240 323 aa11.15□□□□□ -0.62
TMEM139-202ENST00000409102 COL4A5P29400 1685 aa11.14□□□□□ -0.63
TMEM139-202ENST00000409102 PRAMEF22A3QJZ6 481 aa11.14□□□□□ -0.63
TMEM139-202ENST00000409102 NBPF26B4DH59 902 aa11.14□□□□□ -0.63
TMEM139-202ENST00000409102 SNRPA1P09661 255 aaKnown RBP11.14□□□□□ -0.63
TMEM139-202ENST00000409102 MAP1SQ66K74 1059 aaPredicted RBP11.14□□□□□ -0.63
TMEM139-202ENST00000409102 NBPF10Q6P3W6 841 aaKnown RBP11.14□□□□□ -0.63
TMEM139-202ENST00000409102 CNTROBQ8N137 903 aa11.14□□□□□ -0.63
TMEM139-202ENST00000409102 NBPF15Q8N660 670 aa11.14□□□□□ -0.63
TMEM139-202ENST00000409102 PHACTR3Q96KR7 559 aa11.14□□□□□ -0.63
TMEM139-202ENST00000409102 PSMD1Q99460 953 aa11.14□□□□□ -0.63
TMEM139-202ENST00000409102 RSPH6AQ9H0K4 717 aa11.14□□□□□ -0.63
TMEM139-202ENST00000409102 NIP7Q9Y221 180 aaKnown RBP eCLIP11.14□□□□□ -0.63
TMEM139-202ENST00000409102 TRPM7Q96QT4 1865 aa11.14□□□□□ -0.63
TMEM139-202ENST00000409102 WDR33Q9C0J8 1336 aaKnown RBP11.13□□□□□ -0.63
TMEM139-202ENST00000409102 RIC1Q4ADV7 1423 aa11.13□□□□□ -0.63
TMEM139-202ENST00000409102 SLC34A2O95436 690 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms