RNA–Protein interactions for RNA: ENST00000409080.5

ITGA6-202, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 5,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-202ENST00000409080 CCNL1Q9UK58 526 aaPredicted RBP16.62■□□□□ 0.25
ITGA6-202ENST00000409080 CFAP45Q9UL16 551 aa16.62■□□□□ 0.25
ITGA6-202ENST00000409080 SLC39A6Q13433 755 aa16.62■□□□□ 0.25
ITGA6-202ENST00000409080 ARHGAP45Q92619 1136 aa16.62■□□□□ 0.25
ITGA6-202ENST00000409080 CHPF2Q9P2E5 772 aa16.62■□□□□ 0.25
ITGA6-202ENST00000409080 CCDC178Q5BJE1 867 aa16.62■□□□□ 0.25
ITGA6-202ENST00000409080 ADGRL2O95490 1459 aa16.61■□□□□ 0.25
ITGA6-202ENST00000409080 PAF1Q8N7H5 531 aa16.61■□□□□ 0.25
ITGA6-202ENST00000409080 CCDC12Q8WUD4 166 aaPredicted RBP16.61■□□□□ 0.25
ITGA6-202ENST00000409080 ZC3H12CQ9C0D7 883 aaKnown RBP16.61■□□□□ 0.25
ITGA6-202ENST00000409080 ANKRD2Q9GZV1 360 aa16.61■□□□□ 0.25
ITGA6-202ENST00000409080 ME1P48163 572 aa16.61■□□□□ 0.25
ITGA6-202ENST00000409080 NFATC2IPQ8NCF5 419 aa16.61■□□□□ 0.25
ITGA6-202ENST00000409080 RTN4Q9NQC3 1192 aaKnown RBP16.61■□□□□ 0.25
ITGA6-202ENST00000409080 PDCL3Q9H2J4 239 aa16.61■□□□□ 0.25
ITGA6-202ENST00000409080 RAB34Q9BZG1 259 aa16.6■□□□□ 0.25
ITGA6-202ENST00000409080 GNPATO15228 680 aa16.6■□□□□ 0.25
ITGA6-202ENST00000409080 LMOD1P29536 600 aaPredicted RBP16.6■□□□□ 0.25
ITGA6-202ENST00000409080 CATIPQ7Z7H3 387 aa16.6■□□□□ 0.25
ITGA6-202ENST00000409080 SSBP05455 408 aaKnown RBP eCLIP16.6■□□□□ 0.25
ITGA6-202ENST00000409080 KIF5BP33176 963 aa16.6■□□□□ 0.25
ITGA6-202ENST00000409080 GPS2Q13227 327 aa16.6■□□□□ 0.25
ITGA6-202ENST00000409080 PHAXQ9H814 394 aaKnown RBP16.6■□□□□ 0.25
ITGA6-202ENST00000409080 EDC4Q6P2E9 1401 aaKnown RBP16.6■□□□□ 0.25
ITGA6-202ENST00000409080 RBM17Q96I25 401 aaKnown RBP16.6■□□□□ 0.25
ITGA6-202ENST00000409080 PLEKHH1Q9ULM0 1364 aa16.6■□□□□ 0.25
ITGA6-202ENST00000409080 SLC12A7Q9Y666 1083 aa16.6■□□□□ 0.25
ITGA6-202ENST00000409080 SBNO1A3KN83 1393 aa16.59■□□□□ 0.25
ITGA6-202ENST00000409080 ORAI2Q96SN7 254 aa16.59■□□□□ 0.25
ITGA6-202ENST00000409080 TARBP1Q13395 1621 aaKnown RBP16.59■□□□□ 0.25
ITGA6-202ENST00000409080 ZFYP08048 801 aaPredicted RBP16.59■□□□□ 0.25
ITGA6-202ENST00000409080 DHX8Q14562 1220 aaKnown RBP16.59■□□□□ 0.25
ITGA6-202ENST00000409080 MTHFSDQ2M296 383 aaKnown RBP16.59■□□□□ 0.25
ITGA6-202ENST00000409080 SCLT1Q96NL6 688 aa16.59■□□□□ 0.25
ITGA6-202ENST00000409080 K7ELQ4 463 aaPredicted RBP16.59■□□□□ 0.25
ITGA6-202ENST00000409080 IL15P40933 162 aaPredicted RBP16.59■□□□□ 0.25
ITGA6-202ENST00000409080 CASTP20810 708 aaKnown RBP16.58■□□□□ 0.25
ITGA6-202ENST00000409080 MATR3P43243 847 aaKnown RBP eCLIP16.58■□□□□ 0.25
ITGA6-202ENST00000409080 LUC7LQ9NQ29 371 aaKnown RBP16.58■□□□□ 0.25
ITGA6-202ENST00000409080 POLR3AO14802 1390 aaPredicted RBP16.58■□□□□ 0.25
ITGA6-202ENST00000409080 FIBPO43427 364 aa16.58■□□□□ 0.24
ITGA6-202ENST00000409080 CEBPZQ03701 1054 aaKnown RBP16.58■□□□□ 0.24
ITGA6-202ENST00000409080 ATP2B3Q16720 1220 aa16.58■□□□□ 0.24
ITGA6-202ENST00000409080 DESP17661 470 aa16.58■□□□□ 0.24
ITGA6-202ENST00000409080 EYA1Q99502 592 aa16.58■□□□□ 0.24
ITGA6-202ENST00000409080 A0A1W2PP64 1363 aa16.58■□□□□ 0.24
ITGA6-202ENST00000409080 CCDC184Q52MB2 194 aa16.58■□□□□ 0.24
ITGA6-202ENST00000409080 PARP10Q53GL7 1025 aa16.58■□□□□ 0.24
ITGA6-202ENST00000409080 GRM8O00222 908 aa16.57■□□□□ 0.24
ITGA6-202ENST00000409080 RNMTO43148 476 aaKnown RBP16.57■□□□□ 0.24
ITGA6-202ENST00000409080 MAP3K19Q56UN5 1328 aa16.57■□□□□ 0.24
ITGA6-202ENST00000409080 TXLNBQ8N3L3 684 aa16.57■□□□□ 0.24
ITGA6-202ENST00000409080 GOLIM4O00461 696 aa16.57■□□□□ 0.24
ITGA6-202ENST00000409080 PLCG2P16885 1265 aa16.57■□□□□ 0.24
ITGA6-202ENST00000409080 PDILTQ8N807 584 aa16.57■□□□□ 0.24
ITGA6-202ENST00000409080 PIBF1Q8WXW3 757 aa16.57■□□□□ 0.24
ITGA6-202ENST00000409080 ZNHIT6Q9NWK9 470 aaKnown RBP16.57■□□□□ 0.24
ITGA6-202ENST00000409080 TRIM27P14373 513 aa16.57■□□□□ 0.24
ITGA6-202ENST00000409080 CEP57L1Q8IYX8 460 aa16.57■□□□□ 0.24
ITGA6-202ENST00000409080 COL17A1Q9UMD9 1497 aaPredicted RBP16.57■□□□□ 0.24
ITGA6-202ENST00000409080 IFIT3O14879 490 aaKnown RBP16.56■□□□□ 0.24
ITGA6-202ENST00000409080 PRPF40BQ6NWY9 871 aaKnown RBP16.56■□□□□ 0.24
ITGA6-202ENST00000409080 BABAM1Q9NWV8 329 aa16.56■□□□□ 0.24
ITGA6-202ENST00000409080 FBLN1P23142 703 aa16.56■□□□□ 0.24
ITGA6-202ENST00000409080 MYO5CQ9NQX4 1742 aa16.56■□□□□ 0.24
ITGA6-202ENST00000409080 TSPY2A6NKD2 308 aa16.56■□□□□ 0.24
ITGA6-202ENST00000409080 TMEM266Q2M3C6 531 aa16.56■□□□□ 0.24
ITGA6-202ENST00000409080 CNBD1Q8NA66 436 aa16.56■□□□□ 0.24
ITGA6-202ENST00000409080 LINS1Q8NG48 757 aa16.56■□□□□ 0.24
ITGA6-202ENST00000409080 FAM98CQ17RN3 349 aaKnown RBP16.56■□□□□ 0.24
ITGA6-202ENST00000409080 ZRANB1Q9UGI0 708 aa16.56■□□□□ 0.24
ITGA6-202ENST00000409080 SAMD9Q5K651 1589 aa16.56■□□□□ 0.24
ITGA6-202ENST00000409080 SMARCA5O60264 1052 aaPredicted RBP16.55■□□□□ 0.24
ITGA6-202ENST00000409080 KAT14Q9H8E8 782 aa16.55■□□□□ 0.24
ITGA6-202ENST00000409080 SH2B1Q9NRF2 756 aaPredicted RBP16.55■□□□□ 0.24
ITGA6-202ENST00000409080 PPP1R12BO60237 982 aaPredicted RBP16.55■□□□□ 0.24
ITGA6-202ENST00000409080 ANXA1P04083 346 aa16.55■□□□□ 0.24
ITGA6-202ENST00000409080 MFSD6Q6ZSS7 791 aa16.54■□□□□ 0.24
ITGA6-202ENST00000409080 BAG4O95429 457 aaKnown RBP16.54■□□□□ 0.24
ITGA6-202ENST00000409080 FLAD1Q8NFF5 587 aa16.54■□□□□ 0.24
ITGA6-202ENST00000409080 MYO6Q9UM54 1294 aa16.54■□□□□ 0.24
ITGA6-202ENST00000409080 IRS4O14654 1257 aaPredicted RBP16.54■□□□□ 0.24
ITGA6-202ENST00000409080 CCDC39Q9UFE4 941 aa16.54■□□□□ 0.24
ITGA6-202ENST00000409080 NPHP4O75161 1426 aaPredicted RBP16.54■□□□□ 0.24
ITGA6-202ENST00000409080 TNNI2P48788 182 aa16.54■□□□□ 0.24
ITGA6-202ENST00000409080 HMGN5P82970 282 aaKnown RBP16.54■□□□□ 0.24
ITGA6-202ENST00000409080 TANGO6Q9C0B7 1094 aa16.53■□□□□ 0.24
ITGA6-202ENST00000409080 CCDC194A0A1B0GVG4 234 aa16.53■□□□□ 0.24
ITGA6-202ENST00000409080 SMC2O95347 1197 aa16.53■□□□□ 0.24
ITGA6-202ENST00000409080 ZNF772Q68DY9 489 aaPredicted RBP16.53■□□□□ 0.24
ITGA6-202ENST00000409080 LMBR1LQ6UX01 489 aa16.53■□□□□ 0.24
ITGA6-202ENST00000409080 GOLGA8AA7E2F4 631 aa16.53■□□□□ 0.24
ITGA6-202ENST00000409080 GOLGA8BA8MQT2 603 aa16.53■□□□□ 0.24
ITGA6-202ENST00000409080 GSE1Q14687 1217 aa16.53■□□□□ 0.24
ITGA6-202ENST00000409080 IL27Q8NEV9 243 aa16.53■□□□□ 0.24
ITGA6-202ENST00000409080 SPATA32Q96LK8 384 aa16.53■□□□□ 0.24
ITGA6-202ENST00000409080 SSRP1Q08945 709 aaKnown RBP16.53■□□□□ 0.24
ITGA6-202ENST00000409080 NSFL1CQ9UNZ2 370 aaKnown RBP16.53■□□□□ 0.24
ITGA6-202ENST00000409080 B4DLN1 442 aa16.52■□□□□ 0.24
ITGA6-202ENST00000409080 MRPL12P52815 198 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms