RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 ARHGAP45Q92619 1136 aa14.94□□□□□ -0.02
RNF43-201ENST00000407977 GDPD2Q9HCC8 539 aa14.94□□□□□ -0.02
RNF43-201ENST00000407977 GOPCQ9HD26 462 aa14.94□□□□□ -0.02
RNF43-201ENST00000407977 BCCIPQ9P287 314 aaKnown RBP eCLIP14.94□□□□□ -0.02
RNF43-201ENST00000407977 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.94□□□□□ -0.02
RNF43-201ENST00000407977 SPAG1Q07617 926 aa14.94□□□□□ -0.02
RNF43-201ENST00000407977 CTAGE15A4D2H0 777 aa14.93□□□□□ -0.02
RNF43-201ENST00000407977 CTAGE8P0CG41 777 aa14.93□□□□□ -0.02
RNF43-201ENST00000407977 TRIM21P19474 475 aaKnown RBP14.93□□□□□ -0.02
RNF43-201ENST00000407977 C6orf163Q5TEZ5 329 aa14.93□□□□□ -0.02
RNF43-201ENST00000407977 CTAGE6Q86UF2 777 aa14.93□□□□□ -0.02
RNF43-201ENST00000407977 CTAGE4Q8IX94 777 aa14.93□□□□□ -0.02
RNF43-201ENST00000407977 GPATCH11Q8N954 259 aa14.93□□□□□ -0.02
RNF43-201ENST00000407977 CCDC61Q9Y6R9 512 aa14.93□□□□□ -0.02
RNF43-201ENST00000407977 GOLGA8BA8MQT2 603 aa14.93□□□□□ -0.02
RNF43-201ENST00000407977 MTIF2P46199 727 aaKnown RBP14.93□□□□□ -0.02
RNF43-201ENST00000407977 RBM27Q9P2N5 1060 aaKnown RBP14.93□□□□□ -0.02
RNF43-201ENST00000407977 TAF7Q15545 349 aaPredicted RBP14.93□□□□□ -0.02
RNF43-201ENST00000407977 DHX37Q8IY37 1157 aaKnown RBP14.93□□□□□ -0.02
RNF43-201ENST00000407977 KRI1Q8N9T8 703 aaKnown RBP14.93□□□□□ -0.02
RNF43-201ENST00000407977 TMX3Q96JJ7 454 aa14.93□□□□□ -0.02
RNF43-201ENST00000407977 TFIP11Q9UBB9 837 aaKnown RBP14.93□□□□□ -0.02
RNF43-201ENST00000407977 GTF2A1P52655 376 aaPredicted RBP14.93□□□□□ -0.02
RNF43-201ENST00000407977 OPA1O60313 960 aa14.92□□□□□ -0.02
RNF43-201ENST00000407977 NUCB1Q02818 461 aa14.92□□□□□ -0.02
RNF43-201ENST00000407977 CETN1Q12798 172 aa14.92□□□□□ -0.02
RNF43-201ENST00000407977 METTL24Q5JXM2 366 aa14.92□□□□□ -0.02
RNF43-201ENST00000407977 IPO4Q8TEX9 1081 aaKnown RBP14.92□□□□□ -0.02
RNF43-201ENST00000407977 MAP3K12Q12852 859 aa14.92□□□□□ -0.02
RNF43-201ENST00000407977 MAATS1Q7Z4T9 603 aa14.92□□□□□ -0.02
RNF43-201ENST00000407977 A0A087WZG4 1122 aa14.92□□□□□ -0.02
RNF43-201ENST00000407977 GOLGA8AA7E2F4 631 aa14.92□□□□□ -0.02
RNF43-201ENST00000407977 BMP15O95972 392 aa14.92□□□□□ -0.02
RNF43-201ENST00000407977 TNIP1Q15025 636 aa14.92□□□□□ -0.02
RNF43-201ENST00000407977 RRS1Q15050 365 aaKnown RBP14.92□□□□□ -0.02
RNF43-201ENST00000407977 RMND1Q9NWS8 449 aa14.92□□□□□ -0.02
RNF43-201ENST00000407977 CCDC194A0A1B0GVG4 234 aa14.91□□□□□ -0.02
RNF43-201ENST00000407977 LRRC27Q9C0I9 530 aa14.91□□□□□ -0.02
RNF43-201ENST00000407977 SPATA24Q86W54 205 aa14.91□□□□□ -0.02
RNF43-201ENST00000407977 KCNG4Q8TDN1 519 aa14.91□□□□□ -0.02
RNF43-201ENST00000407977 PPM1EQ8WY54 764 aa14.91□□□□□ -0.02
RNF43-201ENST00000407977 NSRP1Q9H0G5 558 aaKnown RBP14.91□□□□□ -0.02
RNF43-201ENST00000407977 CYLC1P35663 651 aaPredicted RBP14.91□□□□□ -0.02
RNF43-201ENST00000407977 CCDC186Q7Z3E2 898 aa14.91□□□□□ -0.02
RNF43-201ENST00000407977 SKAP1Q86WV1 359 aa14.91□□□□□ -0.02
RNF43-201ENST00000407977 OSCARQ8IYS5 282 aa14.91□□□□□ -0.02
RNF43-201ENST00000407977 JADE2Q9NQC1 790 aa14.91□□□□□ -0.02
RNF43-201ENST00000407977 FSD2A1L4K1 749 aa14.91□□□□□ -0.02
RNF43-201ENST00000407977 IARSP41252 1262 aaKnown RBP14.91□□□□□ -0.02
RNF43-201ENST00000407977 UBASH3AP57075 661 aa14.91□□□□□ -0.02
RNF43-201ENST00000407977 GUCY1B3Q02153 619 aa14.91□□□□□ -0.02
RNF43-201ENST00000407977 NEK1Q96PY6 1258 aa14.9□□□□□ -0.02
RNF43-201ENST00000407977 TCP11L1Q9NUJ3 509 aa14.9□□□□□ -0.02
RNF43-201ENST00000407977 NCAPD3P42695 1498 aa14.9□□□□□ -0.02
RNF43-201ENST00000407977 NEBLO76041 1014 aa14.9□□□□□ -0.02
RNF43-201ENST00000407977 PIP4K2BP78356 416 aa14.9□□□□□ -0.02
RNF43-201ENST00000407977 GIMAP6Q6P9H5 292 aa14.9□□□□□ -0.02
RNF43-201ENST00000407977 KCNH5Q8NCM2 988 aa14.9□□□□□ -0.02
RNF43-201ENST00000407977 BIN1O00499 593 aa14.9□□□□□ -0.02
RNF43-201ENST00000407977 IGHDP01880 384 aa14.9□□□□□ -0.02
RNF43-201ENST00000407977 AMOTQ4VCS5 1084 aa14.89□□□□□ -0.03
RNF43-201ENST00000407977 CCDC155Q8N6L0 562 aa14.89□□□□□ -0.03
RNF43-201ENST00000407977 ORC3Q9UBD5 711 aaPredicted RBP14.89□□□□□ -0.03
RNF43-201ENST00000407977 USP16Q9Y5T5 823 aa14.89□□□□□ -0.03
RNF43-201ENST00000407977 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.89□□□□□ -0.032e-8■■□□□ 14
RNF43-201ENST00000407977 N4BP3O15049 544 aa14.89□□□□□ -0.03
RNF43-201ENST00000407977 SMC5Q8IY18 1101 aa14.89□□□□□ -0.03
RNF43-201ENST00000407977 CALML4Q96GE6 196 aa14.89□□□□□ -0.03
RNF43-201ENST00000407977 HYPKQ9NX55 129 aa14.89□□□□□ -0.03
RNF43-201ENST00000407977 DNAI1Q9UI46 699 aa14.89□□□□□ -0.03
RNF43-201ENST00000407977 TMCO5BA8MYB1 307 aa14.89□□□□□ -0.03
RNF43-201ENST00000407977 IFIT3O14879 490 aaKnown RBP14.89□□□□□ -0.03
RNF43-201ENST00000407977 THEMISQ8N1K5 641 aaPredicted RBP14.89□□□□□ -0.03
RNF43-201ENST00000407977 GOLGA1Q92805 767 aa14.89□□□□□ -0.03
RNF43-201ENST00000407977 USP5P45974 858 aa14.88□□□□□ -0.03
RNF43-201ENST00000407977 CATIPQ7Z7H3 387 aa14.88□□□□□ -0.03
RNF43-201ENST00000407977 OGFRQ9NZT2 677 aa14.88□□□□□ -0.03
RNF43-201ENST00000407977 CCDC172P0C7W6 258 aa14.88□□□□□ -0.03
RNF43-201ENST00000407977 SYKP43405 635 aa14.88□□□□□ -0.03
RNF43-201ENST00000407977 CEP63Q96MT8 703 aa14.88□□□□□ -0.03
RNF43-201ENST00000407977 THUMPD2Q9BTF0 503 aaKnown RBP14.88□□□□□ -0.03
RNF43-201ENST00000407977 PLVAPQ9BX97 442 aa14.88□□□□□ -0.03
RNF43-201ENST00000407977 DBF4Q9UBU7 674 aaPredicted RBP14.88□□□□□ -0.03
RNF43-201ENST00000407977 STARD3NLO95772 234 aa14.88□□□□□ -0.03
RNF43-201ENST00000407977 ANO6Q4KMQ2 910 aa14.88□□□□□ -0.03
RNF43-201ENST00000407977 MCM10Q7L590 875 aa14.88□□□□□ -0.03
RNF43-201ENST00000407977 V9GYY5 206 aaPredicted RBP14.88□□□□□ -0.03
RNF43-201ENST00000407977 IBSPP21815 317 aaPredicted RBP14.88□□□□□ -0.03
RNF43-201ENST00000407977 NLRP5P59047 1200 aa14.88□□□□□ -0.03
RNF43-201ENST00000407977 SMAP1Q8IYB5 467 aaPredicted RBP14.88□□□□□ -0.03
RNF43-201ENST00000407977 FAM69CQ0P6D2 419 aa14.88□□□□□ -0.03
RNF43-201ENST00000407977 UBE4AQ14139 1066 aa14.88□□□□□ -0.03
RNF43-201ENST00000407977 STMN4Q9H169 189 aaPredicted RBP14.88□□□□□ -0.03
RNF43-201ENST00000407977 ANKRD18BA2A2Z9 1011 aa14.87□□□□□ -0.03
RNF43-201ENST00000407977 RAB3GAP1Q15042 981 aa14.87□□□□□ -0.03
RNF43-201ENST00000407977 TTF1Q15361 905 aaPredicted RBP14.87□□□□□ -0.03
RNF43-201ENST00000407977 AEBP2Q6ZN18 517 aaPredicted RBP14.87□□□□□ -0.03
RNF43-201ENST00000407977 AKR1B10O60218 316 aa14.87□□□□□ -0.03
RNF43-201ENST00000407977 CCDC40Q4G0X9 1142 aa14.87□□□□□ -0.03
RNF43-201ENST00000407977 CAVIN4Q5BKX8 364 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms