RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 CNTROBQ8N137 903 aa20.05■□□□□ 0.8
COL23A1-202ENST00000407622 NCAPD2Q15021 1401 aa20.05■□□□□ 0.8
COL23A1-202ENST00000407622 AMOTQ4VCS5 1084 aa20.05■□□□□ 0.8
COL23A1-202ENST00000407622 NPHP3Q7Z494 1330 aa20.05■□□□□ 0.8
COL23A1-202ENST00000407622 SYCE3A1L190 88 aa20.04■□□□□ 0.8
COL23A1-202ENST00000407622 BRINP3Q76B58 766 aa20.04■□□□□ 0.8
COL23A1-202ENST00000407622 SLAIN2Q9P270 581 aa20.04■□□□□ 0.8
COL23A1-202ENST00000407622 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.04■□□□□ 0.8
COL23A1-202ENST00000407622 SLIT3O75094 1523 aa20.04■□□□□ 0.8
COL23A1-202ENST00000407622 HEG1Q9ULI3 1381 aa20.04■□□□□ 0.8
COL23A1-202ENST00000407622 MTX1Q13505 466 aa20.04■□□□□ 0.8
COL23A1-202ENST00000407622 C9orf78Q9NZ63 289 aaPredicted RBP20.04■□□□□ 0.8
COL23A1-202ENST00000407622 USP42Q9H9J4 1324 aaKnown RBP20.04■□□□□ 0.8
COL23A1-202ENST00000407622 GDPD2Q9HCC8 539 aa20.03■□□□□ 0.8
COL23A1-202ENST00000407622 EPB41L2O43491 1005 aaKnown RBP20.03■□□□□ 0.8
COL23A1-202ENST00000407622 CPA1P15085 419 aa20.03■□□□□ 0.8
COL23A1-202ENST00000407622 KSR2Q6VAB6 950 aa20.03■□□□□ 0.8
COL23A1-202ENST00000407622 TTC14Q96N46 770 aa20.03■□□□□ 0.8
COL23A1-202ENST00000407622 TCHHQ07283 1943 aa20.02■□□□□ 0.8
COL23A1-202ENST00000407622 RGPD5Q99666 1765 aa20.02■□□□□ 0.8
COL23A1-202ENST00000407622 HSP90AB4PQ58FF6 505 aa20.02■□□□□ 0.8
COL23A1-202ENST00000407622 NAP1L5Q96NT1 182 aaPredicted RBP20.02■□□□□ 0.8
COL23A1-202ENST00000407622 RPAP1Q9BWH6 1393 aaPredicted RBP20.01■□□□□ 0.79
COL23A1-202ENST00000407622 SIPA1L3O60292 1781 aaPredicted RBP20.01■□□□□ 0.79
COL23A1-202ENST00000407622 AK2P54819 239 aa20.01■□□□□ 0.79
COL23A1-202ENST00000407622 KAZALD1Q96I82 304 aa20.01■□□□□ 0.79
COL23A1-202ENST00000407622 TTC41PQ6P2S7 1318 aa20.01■□□□□ 0.79
COL23A1-202ENST00000407622 DTNBO60941 627 aa20.01■□□□□ 0.79
COL23A1-202ENST00000407622 ALDH1L1O75891 902 aa20.01■□□□□ 0.79
COL23A1-202ENST00000407622 GLRX3O76003 335 aaKnown RBP20.01■□□□□ 0.79
COL23A1-202ENST00000407622 PTH1RQ03431 593 aa20.01■□□□□ 0.79
COL23A1-202ENST00000407622 AIMP1Q12904 312 aaKnown RBP20.01■□□□□ 0.79
COL23A1-202ENST00000407622 CHMP4AQ9BY43 222 aa20.01■□□□□ 0.79
COL23A1-202ENST00000407622 LRSAM1Q6UWE0 723 aa20■□□□□ 0.79
COL23A1-202ENST00000407622 RUFY3Q7L099 469 aa20■□□□□ 0.79
COL23A1-202ENST00000407622 CLASRPQ8N2M8 674 aaKnown RBP20■□□□□ 0.79
COL23A1-202ENST00000407622 ANP32BQ92688 251 aaKnown RBP20■□□□□ 0.79
COL23A1-202ENST00000407622 SUCLG2Q96I99 432 aa20■□□□□ 0.79
COL23A1-202ENST00000407622 ALS2Q96Q42 1657 aa19.99■□□□□ 0.79
COL23A1-202ENST00000407622 GADD45BO75293 160 aaPredicted RBP19.99■□□□□ 0.79
COL23A1-202ENST00000407622 CAMTA1Q9Y6Y1 1673 aa19.99■□□□□ 0.79
COL23A1-202ENST00000407622 OVOS2A0A0G2JMS6 1433 aa19.99■□□□□ 0.79
COL23A1-202ENST00000407622 LARGE1O95461 756 aa19.98■□□□□ 0.79
COL23A1-202ENST00000407622 SLC39A6Q13433 755 aa19.98■□□□□ 0.79
COL23A1-202ENST00000407622 PDIA6Q15084 440 aa19.98■□□□□ 0.79
COL23A1-202ENST00000407622 KIAA1211Q6ZU35 1233 aa19.98■□□□□ 0.79
COL23A1-202ENST00000407622 DIAPH3Q9NSV4 1193 aa19.98■□□□□ 0.79
COL23A1-202ENST00000407622 ECHDC1Q9NTX5 307 aa19.98■□□□□ 0.79
COL23A1-202ENST00000407622 MBD3O95983 291 aa19.98■□□□□ 0.79
COL23A1-202ENST00000407622 BICC1Q9H694 974 aaKnown RBP19.98■□□□□ 0.79
COL23A1-202ENST00000407622 ADCK5Q3MIX3 580 aa19.97■□□□□ 0.79
COL23A1-202ENST00000407622 AACSQ86V21 672 aa19.97■□□□□ 0.79
COL23A1-202ENST00000407622 SPATA31A3Q5VYP0 1347 aa19.97■□□□□ 0.79
COL23A1-202ENST00000407622 SASH1O94885 1247 aa19.97■□□□□ 0.79
COL23A1-202ENST00000407622 CASTP20810 708 aaKnown RBP19.97■□□□□ 0.79
COL23A1-202ENST00000407622 ZC3H6P61129 1189 aaKnown RBP19.97■□□□□ 0.79
COL23A1-202ENST00000407622 GRM8O00222 908 aa19.96■□□□□ 0.79
COL23A1-202ENST00000407622 IFIT2P09913 472 aaKnown RBP19.96■□□□□ 0.79
COL23A1-202ENST00000407622 USP48Q86UV5 1035 aa19.96■□□□□ 0.79
COL23A1-202ENST00000407622 HYPKQ9NX55 129 aa19.96■□□□□ 0.79
COL23A1-202ENST00000407622 TNS3Q68CZ2 1445 aa19.96■□□□□ 0.79
COL23A1-202ENST00000407622 WDR33Q9C0J8 1336 aaKnown RBP19.96■□□□□ 0.79
COL23A1-202ENST00000407622 LINS1Q8NG48 757 aa19.96■□□□□ 0.79
COL23A1-202ENST00000407622 DDX54Q8TDD1 881 aaKnown RBP19.96■□□□□ 0.79
COL23A1-202ENST00000407622 PDLIM2Q96JY6 352 aa19.96■□□□□ 0.79
COL23A1-202ENST00000407622 TLR7Q9NYK1 1049 aaKnown RBP19.96■□□□□ 0.79
COL23A1-202ENST00000407622 IGKV5-2P06315 115 aa19.95■□□□□ 0.78
COL23A1-202ENST00000407622 PRPF40BQ6NWY9 871 aaKnown RBP19.95■□□□□ 0.78
COL23A1-202ENST00000407622 ZSCAN30Q86W11 494 aa19.95■□□□□ 0.78
COL23A1-202ENST00000407622 RNF214Q8ND24 703 aa19.95■□□□□ 0.78
COL23A1-202ENST00000407622 EAF2Q96CJ1 260 aaPredicted RBP19.95■□□□□ 0.78
COL23A1-202ENST00000407622 DDX21Q9NR30 783 aaKnown RBP eCLIP19.95■□□□□ 0.78
COL23A1-202ENST00000407622 C5P01031 1676 aa19.95■□□□□ 0.78
COL23A1-202ENST00000407622 ADAMTS7Q9UKP4 1686 aa19.95■□□□□ 0.78
COL23A1-202ENST00000407622 KLHDC4Q8TBB5 520 aa19.94■□□□□ 0.78
COL23A1-202ENST00000407622 CCDC8Q9H0W5 538 aaPredicted RBP19.94■□□□□ 0.78
COL23A1-202ENST00000407622 LIMCH1Q9UPQ0 1083 aa19.94■□□□□ 0.78
COL23A1-202ENST00000407622 ERBB3P21860 1342 aa19.94■□□□□ 0.78
COL23A1-202ENST00000407622 COL9A3Q14050 684 aaPredicted RBP19.94■□□□□ 0.78
COL23A1-202ENST00000407622 SIL1Q9H173 461 aa19.94■□□□□ 0.78
COL23A1-202ENST00000407622 FAM227BQ96M60 508 aa19.93■□□□□ 0.78
COL23A1-202ENST00000407622 UTYO14607 1347 aa19.93■□□□□ 0.78
COL23A1-202ENST00000407622 MYL6BP14649 208 aa19.93■□□□□ 0.78
COL23A1-202ENST00000407622 ERC1Q8IUD2 1116 aa19.93■□□□□ 0.78
COL23A1-202ENST00000407622 JAKMIP1Q96N16 626 aaKnown RBP19.93■□□□□ 0.78
COL23A1-202ENST00000407622 CNPY2Q9Y2B0 182 aa19.93■□□□□ 0.78
COL23A1-202ENST00000407622 KDM6AO15550 1401 aaPredicted RBP19.93■□□□□ 0.78
COL23A1-202ENST00000407622 SOS2Q07890 1332 aaPredicted RBP19.93■□□□□ 0.78
COL23A1-202ENST00000407622 SYT1P21579 422 aa19.92■□□□□ 0.78
COL23A1-202ENST00000407622 TPRNQ4KMQ1 711 aa19.92■□□□□ 0.78
COL23A1-202ENST00000407622 ZNF790Q6PG37 636 aa19.92■□□□□ 0.78
COL23A1-202ENST00000407622 CABLES1Q8TDN4 633 aa19.92■□□□□ 0.78
COL23A1-202ENST00000407622 RUFY2Q8WXA3 655 aa19.92■□□□□ 0.78
COL23A1-202ENST00000407622 GPATCH3Q96I76 525 aa19.92■□□□□ 0.78
COL23A1-202ENST00000407622 EVI5LQ96CN4 794 aa19.91■□□□□ 0.78
COL23A1-202ENST00000407622 ZSCAN22P10073 491 aaPredicted RBP19.91■□□□□ 0.78
COL23A1-202ENST00000407622 PIP4K2AP48426 406 aaPredicted RBP19.91■□□□□ 0.78
COL23A1-202ENST00000407622 ST3GAL1Q11201 340 aa19.91■□□□□ 0.78
COL23A1-202ENST00000407622 EPHA10Q5JZY3 1008 aa19.91■□□□□ 0.78
COL23A1-202ENST00000407622 RIC3Q7Z5B4 369 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms