RNA–Protein interactions for RNA: ENST00000407319.6

TRIOBP-205, Transcript of TRIO and F-actin binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIOBP, Length 2,125 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-205ENST00000407319 IL27Q8NEV9 243 aa33.49■■■□□ 2.95
TRIOBP-205ENST00000407319 EP400Q96L91 3159 aa33.49■■■□□ 2.95
TRIOBP-205ENST00000407319 TUBGCP6Q96RT7 1819 aa33.49■■■□□ 2.95
TRIOBP-205ENST00000407319 KCNQ2O43526 872 aa33.49■■■□□ 2.95
TRIOBP-205ENST00000407319 DDX11L8A8MPP1 907 aa33.48■■■□□ 2.95
TRIOBP-205ENST00000407319 PTCD1O75127 700 aaKnown RBP33.48■■■□□ 2.95
TRIOBP-205ENST00000407319 ATG3Q9NT62 314 aa33.47■■■□□ 2.95
TRIOBP-205ENST00000407319 ATP8B2P98198 1209 aa33.47■■■□□ 2.95
TRIOBP-205ENST00000407319 FMNL2Q96PY5 1086 aa33.47■■■□□ 2.95
TRIOBP-205ENST00000407319 RBM42Q9BTD8 480 aaKnown RBP33.46■■■□□ 2.95
TRIOBP-205ENST00000407319 SBF2Q86WG5 1849 aa33.46■■■□□ 2.95
TRIOBP-205ENST00000407319 APBB1O00213 710 aa33.46■■■□□ 2.95
TRIOBP-205ENST00000407319 RAB3GAP1Q15042 981 aa33.46■■■□□ 2.95
TRIOBP-205ENST00000407319 BRPF3Q9ULD4 1205 aa33.46■■■□□ 2.95
TRIOBP-205ENST00000407319 SALL3Q9BXA9 1300 aa33.45■■■□□ 2.95
TRIOBP-205ENST00000407319 HOXB7P09629 217 aa33.45■■■□□ 2.95
TRIOBP-205ENST00000407319 PDE1AP54750 535 aa33.45■■■□□ 2.95
TRIOBP-205ENST00000407319 LAMB4A4D0S4 1761 aa33.44■■■□□ 2.94
TRIOBP-205ENST00000407319 RBM6P78332 1123 aaKnown RBP33.44■■■□□ 2.94
TRIOBP-205ENST00000407319 PTF1AQ7RTS3 328 aa33.43■■■□□ 2.94
TRIOBP-205ENST00000407319 L1TD1Q5T7N2 865 aaKnown RBP33.43■■■□□ 2.94
TRIOBP-205ENST00000407319 CHMP4AQ9BY43 222 aa33.43■■■□□ 2.94
TRIOBP-205ENST00000407319 ANXA1P04083 346 aa33.42■■■□□ 2.94
TRIOBP-205ENST00000407319 CHPF2Q9P2E5 772 aa33.42■■■□□ 2.94
TRIOBP-205ENST00000407319 USP16Q9Y5T5 823 aa33.42■■■□□ 2.94
TRIOBP-205ENST00000407319 IBTKQ9P2D0 1353 aaPredicted RBP33.41■■■□□ 2.94
TRIOBP-205ENST00000407319 REC8O95072 547 aa33.41■■■□□ 2.94
TRIOBP-205ENST00000407319 SNRPA1P09661 255 aaKnown RBP33.41■■■□□ 2.94
TRIOBP-205ENST00000407319 LRRCC1Q9C099 1032 aa33.41■■■□□ 2.94
TRIOBP-205ENST00000407319 TRAK2O60296 914 aa33.4■■■□□ 2.94
TRIOBP-205ENST00000407319 TNPO1Q92973 898 aaKnown RBP33.4■■■□□ 2.94
TRIOBP-205ENST00000407319 POTEAQ6S8J7 498 aa33.4■■■□□ 2.94
TRIOBP-205ENST00000407319 NHSQ6T4R5 1651 aa33.39■■■□□ 2.94
TRIOBP-205ENST00000407319 EXOC6BQ9Y2D4 811 aa33.39■■■□□ 2.94
TRIOBP-205ENST00000407319 HSP90AA1P07900 732 aaKnown RBP33.38■■■□□ 2.93
TRIOBP-205ENST00000407319 BTAF1O14981 1849 aa33.38■■■□□ 2.93
TRIOBP-205ENST00000407319 PNMA6EA0A0J9YXQ4 647 aa33.38■■■□□ 2.93
TRIOBP-205ENST00000407319 PROSER3Q2NL68 480 aa33.38■■■□□ 2.93
TRIOBP-205ENST00000407319 GBP4Q96PP9 640 aa33.38■■■□□ 2.93
TRIOBP-205ENST00000407319 USP44Q9H0E7 712 aa33.38■■■□□ 2.93
TRIOBP-205ENST00000407319 ERC2O15083 957 aa33.37■■■□□ 2.93
TRIOBP-205ENST00000407319 PHAXQ9H814 394 aaKnown RBP33.37■■■□□ 2.93
TRIOBP-205ENST00000407319 PIP4K2AP48426 406 aaPredicted RBP33.36■■■□□ 2.93
TRIOBP-205ENST00000407319 LRRFIP2Q9Y608 721 aaKnown RBP33.36■■■□□ 2.93
TRIOBP-205ENST00000407319 RXRBP28702 533 aa33.35■■■□□ 2.93
TRIOBP-205ENST00000407319 SLC4A9Q96Q91 983 aa33.35■■■□□ 2.93
TRIOBP-205ENST00000407319 PTMSP20962 102 aa33.35■■■□□ 2.93
TRIOBP-205ENST00000407319 KRT27Q7Z3Y8 459 aa33.34■■■□□ 2.93
TRIOBP-205ENST00000407319 STAP2Q9UGK3 403 aa33.34■■■□□ 2.93
TRIOBP-205ENST00000407319 FSD2A1L4K1 749 aa33.33■■■□□ 2.93
TRIOBP-205ENST00000407319 UBTFL1P0CB47 393 aaPredicted RBP33.33■■■□□ 2.93
TRIOBP-205ENST00000407319 SRCIN1Q9C0H9 1055 aa33.33■■■□□ 2.93
TRIOBP-205ENST00000407319 TJP1Q07157 1748 aa33.33■■■□□ 2.93
TRIOBP-205ENST00000407319 MX1P20591 662 aa33.32■■■□□ 2.93
TRIOBP-205ENST00000407319 SSH3Q8TE77 659 aa33.32■■■□□ 2.93
TRIOBP-205ENST00000407319 PDIA6Q15084 440 aa33.32■■■□□ 2.92
TRIOBP-205ENST00000407319 AOX1Q06278 1338 aa33.31■■■□□ 2.92
TRIOBP-205ENST00000407319 CLEC17AQ6ZS10 378 aa33.31■■■□□ 2.92
TRIOBP-205ENST00000407319 DBF4Q9UBU7 674 aaPredicted RBP33.31■■■□□ 2.92
TRIOBP-205ENST00000407319 ILDR1Q86SU0 546 aaPredicted RBP33.3■■■□□ 2.92
TRIOBP-205ENST00000407319 DNAJC10Q8IXB1 793 aa33.29■■■□□ 2.92
TRIOBP-205ENST00000407319 MYL6BP14649 208 aa33.29■■■□□ 2.92
TRIOBP-205ENST00000407319 PALLDQ8WX93 1383 aa33.28■■■□□ 2.92
TRIOBP-205ENST00000407319 GOLGA6L3A6NEY3 463 aa33.27■■■□□ 2.92
TRIOBP-205ENST00000407319 ST18O60284 1047 aa33.27■■■□□ 2.92
TRIOBP-205ENST00000407319 POLA2Q14181 598 aa33.27■■■□□ 2.92
TRIOBP-205ENST00000407319 RAB11FIP3O75154 756 aa33.26■■■□□ 2.92
TRIOBP-205ENST00000407319 DDX21Q9NR30 783 aaKnown RBP eCLIP33.26■■■□□ 2.92
TRIOBP-205ENST00000407319 FOXD4L1Q9NU39 408 aa33.26■■■□□ 2.92
TRIOBP-205ENST00000407319 A1BGP04217 495 aa33.26■■■□□ 2.91
TRIOBP-205ENST00000407319 SKOR2Q2VWA4 1001 aaPredicted RBP33.25■■■□□ 2.91
TRIOBP-205ENST00000407319 VSIG10Q8N0Z9 540 aa33.25■■■□□ 2.91
TRIOBP-205ENST00000407319 NBPF26B4DH59 902 aa33.23■■■□□ 2.91
TRIOBP-205ENST00000407319 BEND3Q5T5X7 828 aa33.23■■■□□ 2.91
TRIOBP-205ENST00000407319 NBPF14Q5TI25 921 aa33.23■■■□□ 2.91
TRIOBP-205ENST00000407319 NBPF10Q6P3W6 841 aaKnown RBP33.23■■■□□ 2.91
TRIOBP-205ENST00000407319 NBPF15Q8N660 670 aa33.23■■■□□ 2.91
TRIOBP-205ENST00000407319 DNAAF4Q8WXU2 420 aa33.23■■■□□ 2.91
TRIOBP-205ENST00000407319 ESYT1Q9BSJ8 1104 aa33.23■■■□□ 2.91
TRIOBP-205ENST00000407319 ISY1Q9ULR0 285 aaKnown RBP33.23■■■□□ 2.91
TRIOBP-205ENST00000407319 AIMP1Q12904 312 aaKnown RBP33.22■■■□□ 2.91
TRIOBP-205ENST00000407319 LRP10Q7Z4F1 713 aa33.22■■■□□ 2.91
TRIOBP-205ENST00000407319 CWC22Q9HCG8 908 aaKnown RBP33.22■■■□□ 2.91
TRIOBP-205ENST00000407319 LOC102724428A0A0B4J2F2 783 aa33.21■■■□□ 2.91
TRIOBP-205ENST00000407319 SIK1P57059 783 aa33.21■■■□□ 2.91
TRIOBP-205ENST00000407319 HYPKQ9NX55 129 aa33.21■■■□□ 2.91
TRIOBP-205ENST00000407319 FAM196AQ6ZSG2 479 aa33.2■■■□□ 2.91
TRIOBP-205ENST00000407319 PPP1R42Q7Z4L9 355 aa33.2■■■□□ 2.91
TRIOBP-205ENST00000407319 GZF1Q9H116 711 aaPredicted RBP33.2■■■□□ 2.91
TRIOBP-205ENST00000407319 SSFA2P28290 1259 aa33.2■■■□□ 2.9
TRIOBP-205ENST00000407319 KCNQ4P56696 695 aa33.2■■■□□ 2.9
TRIOBP-205ENST00000407319 NUCB2P80303 420 aa33.2■■■□□ 2.9
TRIOBP-205ENST00000407319 CHMLP26374 656 aa33.19■■■□□ 2.9
TRIOBP-205ENST00000407319 ATP6V1AP38606 617 aa33.19■■■□□ 2.9
TRIOBP-205ENST00000407319 TSHZ3Q63HK5 1081 aa33.19■■■□□ 2.9
TRIOBP-205ENST00000407319 SMARCC1Q92922 1105 aaPredicted RBP33.19■■■□□ 2.9
TRIOBP-205ENST00000407319 ADCY9O60503 1353 aa33.18■■■□□ 2.9
TRIOBP-205ENST00000407319 EPB41L2O43491 1005 aaKnown RBP33.18■■■□□ 2.9
TRIOBP-205ENST00000407319 ITPK1Q13572 414 aa33.18■■■□□ 2.9
TRIOBP-205ENST00000407319 IL17RAQ96F46 866 aa33.18■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms