RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-222ENST00000406454 UQCRHP07919 91 aa15.49■□□□□ 0.07
CACNA1C-222ENST00000406454 CCDC82Q8N4S0 544 aa15.49■□□□□ 0.07
CACNA1C-222ENST00000406454 SSRP1Q08945 709 aaKnown RBP15.49■□□□□ 0.07
CACNA1C-222ENST00000406454 AXDND1Q5T1B0 1012 aaPredicted RBP15.49■□□□□ 0.07
CACNA1C-222ENST00000406454 HMG20BQ9P0W2 317 aa15.49■□□□□ 0.07
CACNA1C-222ENST00000406454 ERLIN1O75477 346 aa15.49■□□□□ 0.07
CACNA1C-222ENST00000406454 EPB41L2O43491 1005 aaKnown RBP15.49■□□□□ 0.07
CACNA1C-222ENST00000406454 STX6O43752 255 aa15.49■□□□□ 0.07
CACNA1C-222ENST00000406454 ZNF444Q8N0Y2 327 aaPredicted RBP15.49■□□□□ 0.07
CACNA1C-222ENST00000406454 CWC15Q9P013 229 aaKnown RBP15.48■□□□□ 0.07
CACNA1C-222ENST00000406454 SDSP20132 328 aa15.48■□□□□ 0.07
CACNA1C-222ENST00000406454 NEK1Q96PY6 1258 aa15.48■□□□□ 0.07
CACNA1C-222ENST00000406454 DDX19AQ9NUU7 478 aaKnown RBP15.48■□□□□ 0.07
CACNA1C-222ENST00000406454 CTAGE5O15320 804 aa15.48■□□□□ 0.07
CACNA1C-222ENST00000406454 ALDH1L1O75891 902 aa15.48■□□□□ 0.07
CACNA1C-222ENST00000406454 SKIDA1Q1XH10 827 aa15.48■□□□□ 0.07
CACNA1C-222ENST00000406454 WDR7Q9Y4E6 1490 aa15.48■□□□□ 0.07
CACNA1C-222ENST00000406454 ERLIN2O94905 339 aa15.48■□□□□ 0.07
CACNA1C-222ENST00000406454 CDC5LQ99459 802 aaKnown RBP15.48■□□□□ 0.07
CACNA1C-222ENST00000406454 SFPQP23246 707 aaKnown RBP eCLIP15.48■□□□□ 0.07
CACNA1C-222ENST00000406454 JARID2Q92833 1246 aaPredicted RBP15.48■□□□□ 0.07
CACNA1C-222ENST00000406454 AKAP4Q5JQC9 854 aa15.47■□□□□ 0.07
CACNA1C-222ENST00000406454 ZRANB1Q9UGI0 708 aa15.47■□□□□ 0.07
CACNA1C-222ENST00000406454 USP16Q9Y5T5 823 aa15.47■□□□□ 0.07
CACNA1C-222ENST00000406454 ITSN2Q9NZM3 1697 aa15.47■□□□□ 0.07
CACNA1C-222ENST00000406454 PDE1AP54750 535 aa15.47■□□□□ 0.07
CACNA1C-222ENST00000406454 ARHGAP29Q52LW3 1261 aa15.47■□□□□ 0.07
CACNA1C-222ENST00000406454 ATP8B2P98198 1209 aa15.47■□□□□ 0.07
CACNA1C-222ENST00000406454 XAGE3Q8WTP9 111 aa15.47■□□□□ 0.07
CACNA1C-222ENST00000406454 RPGRQ92834 1020 aaKnown RBP15.47■□□□□ 0.07
CACNA1C-222ENST00000406454 GDPD2Q9HCC8 539 aa15.46■□□□□ 0.07
CACNA1C-222ENST00000406454 TEX14Q8IWB6 1497 aa15.46■□□□□ 0.07
CACNA1C-222ENST00000406454 BAG4O95429 457 aaKnown RBP15.46■□□□□ 0.07
CACNA1C-222ENST00000406454 NGLY1Q96IV0 654 aa15.46■□□□□ 0.07
CACNA1C-222ENST00000406454 MTHFSDQ2M296 383 aaKnown RBP15.46■□□□□ 0.07
CACNA1C-222ENST00000406454 CKAP2LQ8IYA6 745 aa15.46■□□□□ 0.07
CACNA1C-222ENST00000406454 FSIP1Q8NA03 581 aa15.46■□□□□ 0.07
CACNA1C-222ENST00000406454 CATIPQ7Z7H3 387 aa15.45■□□□□ 0.06
CACNA1C-222ENST00000406454 SLF2Q8IX21 1173 aa15.45■□□□□ 0.06
CACNA1C-222ENST00000406454 PIK3C2GO75747 1445 aa15.45■□□□□ 0.06
CACNA1C-222ENST00000406454 TFIP11Q9UBB9 837 aaKnown RBP15.45■□□□□ 0.06
CACNA1C-222ENST00000406454 UQCRFS1P1P0C7P4 283 aa15.45■□□□□ 0.06
CACNA1C-222ENST00000406454 IARSP41252 1262 aaKnown RBP15.45■□□□□ 0.06
CACNA1C-222ENST00000406454 COPS6Q7L5N1 327 aa15.45■□□□□ 0.06
CACNA1C-222ENST00000406454 SEPT11Q9NVA2 429 aaKnown RBP15.45■□□□□ 0.06
CACNA1C-222ENST00000406454 HAND2P61296 217 aa15.45■□□□□ 0.06
CACNA1C-222ENST00000406454 NCOA7Q8NI08 942 aa15.45■□□□□ 0.06
CACNA1C-222ENST00000406454 CCDC194A0A1B0GVG4 234 aa15.45■□□□□ 0.06
CACNA1C-222ENST00000406454 NLRP5P59047 1200 aa15.45■□□□□ 0.06
CACNA1C-222ENST00000406454 KLHL10Q6JEL2 608 aa15.45■□□□□ 0.06
CACNA1C-222ENST00000406454 FLT4P35916 1363 aa15.45■□□□□ 0.06
CACNA1C-222ENST00000406454 KSR2Q6VAB6 950 aa15.44■□□□□ 0.06
CACNA1C-222ENST00000406454 ZCRB1Q8TBF4 217 aaKnown RBP15.44■□□□□ 0.06
CACNA1C-222ENST00000406454 KIF2AO00139 706 aaPredicted RBP15.44■□□□□ 0.06
CACNA1C-222ENST00000406454 TMEM67Q5HYA8 995 aa15.44■□□□□ 0.06
CACNA1C-222ENST00000406454 IQCEQ6IPM2 695 aa15.44■□□□□ 0.06
CACNA1C-222ENST00000406454 KIAA1328Q86T90 577 aa15.44■□□□□ 0.06
CACNA1C-222ENST00000406454 ORC3Q9UBD5 711 aaPredicted RBP15.44■□□□□ 0.06
CACNA1C-222ENST00000406454 TMX3Q96JJ7 454 aa15.44■□□□□ 0.06
CACNA1C-222ENST00000406454 SHANK2Q9UPX8 1470 aa15.44■□□□□ 0.06
CACNA1C-222ENST00000406454 CCDC66A2RUB6 948 aa15.44■□□□□ 0.06
CACNA1C-222ENST00000406454 LEKR1Q6ZMV7 388 aa15.44■□□□□ 0.06
CACNA1C-222ENST00000406454 CNNM3Q8NE01 707 aa15.44■□□□□ 0.06
CACNA1C-222ENST00000406454 CARD14Q9BXL6 1004 aa15.44■□□□□ 0.06
CACNA1C-222ENST00000406454 USP25Q9UHP3 1055 aa15.44■□□□□ 0.06
CACNA1C-222ENST00000406454 SLC39A6Q13433 755 aa15.43■□□□□ 0.06
CACNA1C-222ENST00000406454 DDX46Q7L014 1031 aaKnown RBP15.43■□□□□ 0.06
CACNA1C-222ENST00000406454 KIAA0556O60303 1618 aa15.43■□□□□ 0.06
CACNA1C-222ENST00000406454 H0YHG0 523 aa15.43■□□□□ 0.06
CACNA1C-222ENST00000406454 LDHCP07864 332 aa15.43■□□□□ 0.06
CACNA1C-222ENST00000406454 CCDC96Q2M329 555 aa15.43■□□□□ 0.06
CACNA1C-222ENST00000406454 ZNF397Q8NF99 534 aaPredicted RBP15.43■□□□□ 0.06
CACNA1C-222ENST00000406454 NPHP3Q7Z494 1330 aa15.43■□□□□ 0.06
CACNA1C-222ENST00000406454 GOLGA6L10A6NI86 522 aa15.43■□□□□ 0.06
CACNA1C-222ENST00000406454 ABCC10Q5T3U5 1492 aa15.43■□□□□ 0.06
CACNA1C-222ENST00000406454 NPATQ14207 1427 aa15.43■□□□□ 0.06
CACNA1C-222ENST00000406454 ESYT1Q9BSJ8 1104 aa15.43■□□□□ 0.06
CACNA1C-222ENST00000406454 CLIP2Q9UDT6 1046 aa15.43■□□□□ 0.06
CACNA1C-222ENST00000406454 TNNQ9UQP3 1299 aa15.43■□□□□ 0.06
CACNA1C-222ENST00000406454 ZSCAN12O43309 604 aa15.43■□□□□ 0.06
CACNA1C-222ENST00000406454 EIF3JO75822 258 aaKnown RBP15.43■□□□□ 0.06
CACNA1C-222ENST00000406454 RAB34Q9BZG1 259 aa15.43■□□□□ 0.06
CACNA1C-222ENST00000406454 MSH6P52701 1360 aa15.43■□□□□ 0.06
CACNA1C-222ENST00000406454 VAMP4O75379 141 aa15.42■□□□□ 0.06
CACNA1C-222ENST00000406454 GRM8O00222 908 aa15.42■□□□□ 0.06
CACNA1C-222ENST00000406454 WDR62O43379 1518 aa15.42■□□□□ 0.06
CACNA1C-222ENST00000406454 TOP1P11387 765 aaKnown RBP15.42■□□□□ 0.06
CACNA1C-222ENST00000406454 EIF2AK4Q9P2K8 1649 aaKnown RBP15.42■□□□□ 0.06
CACNA1C-222ENST00000406454 MFSD6Q6ZSS7 791 aa15.42■□□□□ 0.06
CACNA1C-222ENST00000406454 BRF1Q92994 677 aa15.42■□□□□ 0.06
CACNA1C-222ENST00000406454 METAP2P50579 478 aaKnown RBP eCLIP15.42■□□□□ 0.06
CACNA1C-222ENST00000406454 PTPN14Q15678 1187 aa15.42■□□□□ 0.06
CACNA1C-222ENST00000406454 TMEM266Q2M3C6 531 aa15.42■□□□□ 0.06
CACNA1C-222ENST00000406454 TSPYL6Q8N831 410 aa15.42■□□□□ 0.06
CACNA1C-222ENST00000406454 DMRT2Q9Y5R5 561 aa15.42■□□□□ 0.06
CACNA1C-222ENST00000406454 PPP1R12BO60237 982 aaPredicted RBP15.42■□□□□ 0.06
CACNA1C-222ENST00000406454 KLHL40Q2TBA0 621 aa15.42■□□□□ 0.06
CACNA1C-222ENST00000406454 TAF4BQ92750 862 aa15.42■□□□□ 0.06
CACNA1C-222ENST00000406454 FKBP15Q5T1M5 1219 aa15.41■□□□□ 0.06
CACNA1C-222ENST00000406454 MICU3Q86XE3 530 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms