RNA–Protein interactions for RNA: ENST00000405755.6

PDE4D-207, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 2,294 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-207ENST00000405755 ASAP1Q9ULH1 1129 aa11.69□□□□□ -0.54
PDE4D-207ENST00000405755 ZNF330Q9Y3S2 320 aaPredicted RBP11.69□□□□□ -0.54
PDE4D-207ENST00000405755 ARFGEF2Q9Y6D5 1785 aa11.68□□□□□ -0.54
PDE4D-207ENST00000405755 SPATA31A1Q5TZJ5 1347 aa11.68□□□□□ -0.54
PDE4D-207ENST00000405755 NBPF26B4DH59 902 aa11.68□□□□□ -0.54
PDE4D-207ENST00000405755 RAB11FIP3O75154 756 aa11.68□□□□□ -0.54
PDE4D-207ENST00000405755 PRKCSHP14314 528 aaPredicted RBP11.68□□□□□ -0.54
PDE4D-207ENST00000405755 PDE1AP54750 535 aa11.68□□□□□ -0.54
PDE4D-207ENST00000405755 NBPF14Q5TI25 921 aa11.68□□□□□ -0.54
PDE4D-207ENST00000405755 NBPF10Q6P3W6 841 aaKnown RBP11.68□□□□□ -0.54
PDE4D-207ENST00000405755 NBPF15Q8N660 670 aa11.68□□□□□ -0.54
PDE4D-207ENST00000405755 PLBD2Q8NHP8 589 aa11.68□□□□□ -0.54
PDE4D-207ENST00000405755 CDCA7Q9BWT1 371 aaPredicted RBP11.68□□□□□ -0.54
PDE4D-207ENST00000405755 ITGB4P16144 1822 aa11.68□□□□□ -0.54
PDE4D-207ENST00000405755 AFDNP55196 1824 aaKnown RBP11.68□□□□□ -0.54
PDE4D-207ENST00000405755 MX1P20591 662 aa11.67□□□□□ -0.54
PDE4D-207ENST00000405755 GCKRQ14397 625 aa11.67□□□□□ -0.54
PDE4D-207ENST00000405755 DDB1Q16531 1140 aa11.67□□□□□ -0.54
PDE4D-207ENST00000405755 HSP90AB4PQ58FF6 505 aa11.67□□□□□ -0.54
PDE4D-207ENST00000405755 TSHZ3Q63HK5 1081 aa11.67□□□□□ -0.54
PDE4D-207ENST00000405755 SUCLG2Q96I99 432 aa11.67□□□□□ -0.54
PDE4D-207ENST00000405755 BICC1Q9H694 974 aaKnown RBP11.67□□□□□ -0.54
PDE4D-207ENST00000405755 THRAP3Q9Y2W1 955 aaKnown RBP11.67□□□□□ -0.54
PDE4D-207ENST00000405755 ATP5J2-PTCD1G3V325 749 aa11.67□□□□□ -0.54
PDE4D-207ENST00000405755 MTX1Q13505 466 aa11.67□□□□□ -0.54
PDE4D-207ENST00000405755 CASC1Q6TDU7 716 aa11.67□□□□□ -0.54
PDE4D-207ENST00000405755 RHPN1Q8TCX5 695 aa11.67□□□□□ -0.54
PDE4D-207ENST00000405755 KIF1BPQ96EK5 621 aa11.67□□□□□ -0.54
PDE4D-207ENST00000405755 UTYO14607 1347 aa11.66□□□□□ -0.54
PDE4D-207ENST00000405755 SDSP20132 328 aa11.66□□□□□ -0.54
PDE4D-207ENST00000405755 BECN1Q14457 450 aa11.66□□□□□ -0.54
PDE4D-207ENST00000405755 POTEAQ6S8J7 498 aa11.66□□□□□ -0.54
PDE4D-207ENST00000405755 TTLL7Q6ZT98 887 aa11.66□□□□□ -0.54
PDE4D-207ENST00000405755 TEX13AQ9BXU3 409 aaPredicted RBP11.66□□□□□ -0.54
PDE4D-207ENST00000405755 OSBPL3Q9H4L5 887 aa11.66□□□□□ -0.54
PDE4D-207ENST00000405755 ATG3Q9NT62 314 aa11.66□□□□□ -0.54
PDE4D-207ENST00000405755 BCL9O00512 1426 aa11.65□□□□□ -0.54
PDE4D-207ENST00000405755 LRP6O75581 1613 aa11.65□□□□□ -0.54
PDE4D-207ENST00000405755 NWD2Q9ULI1 1742 aa11.65□□□□□ -0.54
PDE4D-207ENST00000405755 UBE3BQ7Z3V4 1068 aa11.65□□□□□ -0.54
PDE4D-207ENST00000405755 DNAJC10Q8IXB1 793 aa11.65□□□□□ -0.54
PDE4D-207ENST00000405755 C8orf37Q96NL8 207 aa11.65□□□□□ -0.54
PDE4D-207ENST00000405755 ARXQ96QS3 562 aa11.65□□□□□ -0.54
PDE4D-207ENST00000405755 ZBTB3Q9H5J0 574 aa11.65□□□□□ -0.54
PDE4D-207ENST00000405755 DOT1LQ8TEK3 1739 aa11.65□□□□□ -0.54
PDE4D-207ENST00000405755 A0A087WZG4 1122 aa11.65□□□□□ -0.55
PDE4D-207ENST00000405755 STARD3NLO95772 234 aa11.65□□□□□ -0.55
PDE4D-207ENST00000405755 NUTM1Q86Y26 1132 aa11.65□□□□□ -0.55
PDE4D-207ENST00000405755 VSIG10Q8N0Z9 540 aa11.65□□□□□ -0.55
PDE4D-207ENST00000405755 JARID2Q92833 1246 aaPredicted RBP11.65□□□□□ -0.55
PDE4D-207ENST00000405755 PA2G4Q9UQ80 394 aaKnown RBP11.65□□□□□ -0.55
PDE4D-207ENST00000405755 SLIT2O94813 1529 aa11.64□□□□□ -0.55
PDE4D-207ENST00000405755 SPATA31A5Q5VU36 1347 aa11.64□□□□□ -0.55
PDE4D-207ENST00000405755 SPATA31A6Q5VVP1 1343 aa11.64□□□□□ -0.55
PDE4D-207ENST00000405755 SPATA31A7Q8IWB4 1347 aa11.64□□□□□ -0.55
PDE4D-207ENST00000405755 TRIM6-TRIM34B2RNG4 842 aa11.64□□□□□ -0.55
PDE4D-207ENST00000405755 EIF5BO60841 1220 aaKnown RBP11.64□□□□□ -0.55
PDE4D-207ENST00000405755 PRIM1P49642 420 aaKnown RBP11.64□□□□□ -0.55
PDE4D-207ENST00000405755 KAZALD1Q96I82 304 aa11.64□□□□□ -0.55
PDE4D-207ENST00000405755 NGLY1Q96IV0 654 aa11.64□□□□□ -0.55
PDE4D-207ENST00000405755 SALL3Q9BXA9 1300 aa11.64□□□□□ -0.55
PDE4D-207ENST00000405755 MEX3CQ5U5Q3 659 aaKnown RBP11.63□□□□□ -0.55
PDE4D-207ENST00000405755 ERC1Q8IUD2 1116 aa11.63□□□□□ -0.55
PDE4D-207ENST00000405755 RILPL2Q969X0 211 aa11.63□□□□□ -0.55
PDE4D-207ENST00000405755 NUP188Q5SRE5 1749 aa11.63□□□□□ -0.55
PDE4D-207ENST00000405755 G3BP1Q13283 466 aaKnown RBP eCLIP11.62□□□□□ -0.55
PDE4D-207ENST00000405755 RTL5Q5HYW3 569 aaPredicted RBP11.62□□□□□ -0.55
PDE4D-207ENST00000405755 KIF6Q6ZMV9 814 aa11.62□□□□□ -0.55
PDE4D-207ENST00000405755 UNC5CLQ8IV45 518 aa11.62□□□□□ -0.55
PDE4D-207ENST00000405755 CLASRPQ8N2M8 674 aaKnown RBP11.62□□□□□ -0.55
PDE4D-207ENST00000405755 ACSBG1Q96GR2 724 aa11.62□□□□□ -0.55
PDE4D-207ENST00000405755 SIL1Q9H173 461 aa11.62□□□□□ -0.55
PDE4D-207ENST00000405755 RBM25P49756 843 aaKnown RBP11.62□□□□□ -0.55
PDE4D-207ENST00000405755 CWC25Q9NXE8 425 aaPredicted RBP11.62□□□□□ -0.55
PDE4D-207ENST00000405755 STAP2Q9UGK3 403 aa11.62□□□□□ -0.55
PDE4D-207ENST00000405755 FAM98CQ17RN3 349 aaKnown RBP11.61□□□□□ -0.55
PDE4D-207ENST00000405755 EPHA10Q5JZY3 1008 aa11.61□□□□□ -0.55
PDE4D-207ENST00000405755 ZNF772Q68DY9 489 aaPredicted RBP11.61□□□□□ -0.55
PDE4D-207ENST00000405755 BARGINQ6ZT62 677 aa11.61□□□□□ -0.55
PDE4D-207ENST00000405755 AOX1Q06278 1338 aa11.61□□□□□ -0.55
PDE4D-207ENST00000405755 MARCH10Q8NA82 808 aaPredicted RBP11.61□□□□□ -0.55
PDE4D-207ENST00000405755 KLHDC4Q8TBB5 520 aa11.61□□□□□ -0.55
PDE4D-207ENST00000405755 CHMP3Q9Y3E7 222 aa11.61□□□□□ -0.55
PDE4D-207ENST00000405755 IFIT2P09913 472 aaKnown RBP11.6□□□□□ -0.55
PDE4D-207ENST00000405755 NBR1Q14596 966 aa11.6□□□□□ -0.55
PDE4D-207ENST00000405755 CCDC191Q8NCU4 936 aa11.6□□□□□ -0.55
PDE4D-207ENST00000405755 GPATCH3Q96I76 525 aa11.6□□□□□ -0.55
PDE4D-207ENST00000405755 SLC4A9Q96Q91 983 aa11.6□□□□□ -0.55
PDE4D-207ENST00000405755 REC8O95072 547 aa11.59□□□□□ -0.55
PDE4D-207ENST00000405755 MAP4K4O95819 1239 aaPredicted RBP11.59□□□□□ -0.55
PDE4D-207ENST00000405755 AACSQ86V21 672 aa11.59□□□□□ -0.55
PDE4D-207ENST00000405755 TBC1D2Q9BYX2 928 aa11.59□□□□□ -0.55
PDE4D-207ENST00000405755 TUBGCP6Q96RT7 1819 aa11.59□□□□□ -0.55
PDE4D-207ENST00000405755 ERC2O15083 957 aa11.58□□□□□ -0.55
PDE4D-207ENST00000405755 CYP19A1P11511 503 aaPredicted RBP11.58□□□□□ -0.55
PDE4D-207ENST00000405755 ZBTB1Q9Y2K1 713 aa11.58□□□□□ -0.55
PDE4D-207ENST00000405755 SASH1O94885 1247 aa11.58□□□□□ -0.56
PDE4D-207ENST00000405755 VPS72Q15906 364 aa11.58□□□□□ -0.56
PDE4D-207ENST00000405755 LMBR1LQ6UX01 489 aa11.58□□□□□ -0.56
PDE4D-207ENST00000405755 HSCBQ8IWL3 235 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms