RNA–Protein interactions for RNA: ENST00000405570.5

CTNNB1-204, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTNNB1, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-204ENST00000405570 CHL1O00533 1208 aa11.89□□□□□ -0.51
CTNNB1-204ENST00000405570 EPB41L2O43491 1005 aaKnown RBP11.89□□□□□ -0.51
CTNNB1-204ENST00000405570 HAP1P54257 671 aaPredicted RBP11.89□□□□□ -0.51
CTNNB1-204ENST00000405570 TYRO3Q06418 890 aa11.89□□□□□ -0.51
CTNNB1-204ENST00000405570 SLC4A10Q6U841 1118 aa11.89□□□□□ -0.51
CTNNB1-204ENST00000405570 FAM53CQ9NYF3 392 aa11.89□□□□□ -0.51
CTNNB1-204ENST00000405570 DIP2AQ14689 1571 aa11.89□□□□□ -0.51
CTNNB1-204ENST00000405570 CDK11BP21127 795 aaKnown RBP11.89□□□□□ -0.51
CTNNB1-204ENST00000405570 CAMK4Q16566 473 aa11.89□□□□□ -0.51
CTNNB1-204ENST00000405570 MAP3K11Q16584 847 aa11.89□□□□□ -0.51
CTNNB1-204ENST00000405570 TPD52L1Q16890 204 aaPredicted RBP11.89□□□□□ -0.51
CTNNB1-204ENST00000405570 RASEFQ8IZ41 740 aa11.89□□□□□ -0.51
CTNNB1-204ENST00000405570 CBX8Q9HC52 389 aa11.89□□□□□ -0.51
CTNNB1-204ENST00000405570 LARGE1O95461 756 aa11.88□□□□□ -0.51
CTNNB1-204ENST00000405570 ZNF75DP51815 510 aa11.88□□□□□ -0.51
CTNNB1-204ENST00000405570 PLA2G4DQ86XP0 818 aa11.88□□□□□ -0.51
CTNNB1-204ENST00000405570 ZNF397Q8NF99 534 aaPredicted RBP11.88□□□□□ -0.51
CTNNB1-204ENST00000405570 CACTINQ8WUQ7 758 aaKnown RBP11.88□□□□□ -0.51
CTNNB1-204ENST00000405570 TIGD1Q96MW7 591 aa11.88□□□□□ -0.51
CTNNB1-204ENST00000405570 SOX12O15370 315 aa11.88□□□□□ -0.51
CTNNB1-204ENST00000405570 GNAI2P04899 355 aa11.88□□□□□ -0.51
CTNNB1-204ENST00000405570 GJB2P29033 226 aa11.88□□□□□ -0.51
CTNNB1-204ENST00000405570 CEP135Q66GS9 1140 aa11.88□□□□□ -0.51
CTNNB1-204ENST00000405570 NGDNQ8NEJ9 315 aaKnown RBP11.88□□□□□ -0.51
CTNNB1-204ENST00000405570 ZNF592Q92610 1267 aa11.88□□□□□ -0.51
CTNNB1-204ENST00000405570 TRIM5Q9C035 493 aa11.88□□□□□ -0.51
CTNNB1-204ENST00000405570 CHMP3Q9Y3E7 222 aa11.88□□□□□ -0.51
CTNNB1-204ENST00000405570 PNMA6EA0A0J9YXQ4 647 aa11.87□□□□□ -0.51
CTNNB1-204ENST00000405570 LIG1P18858 919 aa11.87□□□□□ -0.51
CTNNB1-204ENST00000405570 G2E3Q7L622 706 aa11.87□□□□□ -0.51
CTNNB1-204ENST00000405570 NUP62CLQ9H1M0 184 aa11.87□□□□□ -0.51
CTNNB1-204ENST00000405570 ZNF215Q9UL58 517 aaPredicted RBP11.87□□□□□ -0.51
CTNNB1-204ENST00000405570 RAD50Q92878 1312 aa11.87□□□□□ -0.51
CTNNB1-204ENST00000405570 XRN1Q8IZH2 1706 aaKnown RBP11.87□□□□□ -0.51
CTNNB1-204ENST00000405570 RBM6P78332 1123 aaKnown RBP11.87□□□□□ -0.51
CTNNB1-204ENST00000405570 ANO6Q4KMQ2 910 aa11.87□□□□□ -0.51
CTNNB1-204ENST00000405570 CKAP2LQ8IYA6 745 aa11.87□□□□□ -0.51
CTNNB1-204ENST00000405570 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.87□□□□□ -0.511e-6■□□□□ 9.9
CTNNB1-204ENST00000405570 V9GYY5 206 aaPredicted RBP11.87□□□□□ -0.51
CTNNB1-204ENST00000405570 USP6P35125 1406 aa11.86□□□□□ -0.51
CTNNB1-204ENST00000405570 ERICH4A6NGS2 130 aa11.86□□□□□ -0.51
CTNNB1-204ENST00000405570 CPA1P15085 419 aa11.86□□□□□ -0.51
CTNNB1-204ENST00000405570 CCT4P50991 539 aaKnown RBP11.86□□□□□ -0.51
CTNNB1-204ENST00000405570 CCDC144BQ3MJ40 725 aa11.86□□□□□ -0.51
CTNNB1-204ENST00000405570 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.86□□□□□ -0.51
CTNNB1-204ENST00000405570 TTC6Q86TZ1 520 aa11.86□□□□□ -0.51
CTNNB1-204ENST00000405570 CCDC83Q8IWF9 413 aa11.86□□□□□ -0.51
CTNNB1-204ENST00000405570 CCDC144CPQ8IYA2 1237 aa11.86□□□□□ -0.51
CTNNB1-204ENST00000405570 ST7Q9NRC1 585 aa11.86□□□□□ -0.51
CTNNB1-204ENST00000405570 CDK12Q9NYV4 1490 aaPredicted RBP11.86□□□□□ -0.51
CTNNB1-204ENST00000405570 SETD1BQ9UPS6 1966 aaKnown RBP11.86□□□□□ -0.51
CTNNB1-204ENST00000405570 FBXO38Q6PIJ6 1188 aa11.86□□□□□ -0.51
CTNNB1-204ENST00000405570 MCM10Q7L590 875 aa11.86□□□□□ -0.51
CTNNB1-204ENST00000405570 RTF1Q92541 710 aaKnown RBP11.86□□□□□ -0.51
CTNNB1-204ENST00000405570 HYPKQ9NX55 129 aa11.86□□□□□ -0.51
CTNNB1-204ENST00000405570 ZNF142P52746 1687 aaPredicted RBP11.85□□□□□ -0.51
CTNNB1-204ENST00000405570 VPS37CA5D8V6 355 aaPredicted RBP11.85□□□□□ -0.51
CTNNB1-204ENST00000405570 USP27XA6NNY8 438 aa11.85□□□□□ -0.51
CTNNB1-204ENST00000405570 SGSM2O43147 1006 aa11.85□□□□□ -0.51
CTNNB1-204ENST00000405570 LSG1Q9H089 658 aaKnown RBP11.85□□□□□ -0.51
CTNNB1-204ENST00000405570 CLIP2Q9UDT6 1046 aa11.85□□□□□ -0.51
CTNNB1-204ENST00000405570 NPHP4O75161 1426 aaPredicted RBP11.85□□□□□ -0.51
CTNNB1-204ENST00000405570 TULP2O00295 520 aa11.85□□□□□ -0.51
CTNNB1-204ENST00000405570 MAP4K4O95819 1239 aaPredicted RBP11.85□□□□□ -0.51
CTNNB1-204ENST00000405570 CAPN2P17655 700 aa11.85□□□□□ -0.51
CTNNB1-204ENST00000405570 SLC20A2Q08357 652 aa11.85□□□□□ -0.51
CTNNB1-204ENST00000405570 MON2Q7Z3U7 1717 aa11.85□□□□□ -0.51
CTNNB1-204ENST00000405570 TDRD7Q8NHU6 1098 aaKnown RBP11.85□□□□□ -0.51
CTNNB1-204ENST00000405570 ATP8B2P98198 1209 aa11.84□□□□□ -0.51
CTNNB1-204ENST00000405570 AEBP1Q8IUX7 1158 aa11.84□□□□□ -0.51
CTNNB1-204ENST00000405570 TNMDQ9H2S6 317 aa11.84□□□□□ -0.51
CTNNB1-204ENST00000405570 DACT1Q9NYF0 836 aa11.84□□□□□ -0.51
CTNNB1-204ENST00000405570 CALCOCO1Q9P1Z2 691 aa11.84□□□□□ -0.51
CTNNB1-204ENST00000405570 TOPAZ1Q8N9V7 1692 aa11.84□□□□□ -0.51
CTNNB1-204ENST00000405570 AATKQ6ZMQ8 1374 aa11.84□□□□□ -0.51
CTNNB1-204ENST00000405570 AOX1Q06278 1338 aa11.84□□□□□ -0.51
CTNNB1-204ENST00000405570 CASTP20810 708 aaKnown RBP11.84□□□□□ -0.51
CTNNB1-204ENST00000405570 ELF2Q15723 593 aa11.84□□□□□ -0.51
CTNNB1-204ENST00000405570 NUTM2GQ5VZR2 741 aa11.84□□□□□ -0.51
CTNNB1-204ENST00000405570 NYAP1Q6ZVC0 841 aa11.84□□□□□ -0.51
CTNNB1-204ENST00000405570 DNAJC2Q99543 621 aaKnown RBP11.84□□□□□ -0.51
CTNNB1-204ENST00000405570 ZNF446Q9NWS9 450 aa11.84□□□□□ -0.51
CTNNB1-204ENST00000405570 AKAP12Q02952 1782 aa11.84□□□□□ -0.51
CTNNB1-204ENST00000405570 ERBB3P21860 1342 aa11.83□□□□□ -0.52
CTNNB1-204ENST00000405570 ST3GAL1Q11201 340 aa11.83□□□□□ -0.52
CTNNB1-204ENST00000405570 FAM173BQ6P4H8 233 aa11.83□□□□□ -0.52
CTNNB1-204ENST00000405570 IL1RAPL2Q9NP60 686 aa11.83□□□□□ -0.52
CTNNB1-204ENST00000405570 ITSN1Q15811 1721 aa11.83□□□□□ -0.52
CTNNB1-204ENST00000405570 ELP1O95163 1332 aa11.83□□□□□ -0.52
CTNNB1-204ENST00000405570 CCDC171Q6TFL3 1326 aa11.83□□□□□ -0.52
CTNNB1-204ENST00000405570 KRT85P78386 507 aa11.83□□□□□ -0.52
CTNNB1-204ENST00000405570 ARID5BQ14865 1188 aa11.83□□□□□ -0.52
CTNNB1-204ENST00000405570 SLFNL1Q499Z3 407 aa11.83□□□□□ -0.52
CTNNB1-204ENST00000405570 RBM43Q6ZSC3 357 aaKnown RBP11.83□□□□□ -0.52
CTNNB1-204ENST00000405570 NUTM1Q86Y26 1132 aa11.83□□□□□ -0.52
CTNNB1-204ENST00000405570 LRRC8AQ8IWT6 810 aa11.83□□□□□ -0.52
CTNNB1-204ENST00000405570 PLCD3Q8N3E9 789 aa11.83□□□□□ -0.52
CTNNB1-204ENST00000405570 MIS18AQ9NYP9 233 aa11.83□□□□□ -0.52
CTNNB1-204ENST00000405570 ZNF165P49910 485 aa11.82□□□□□ -0.52
CTNNB1-204ENST00000405570 FAM193AP78312 1265 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms