RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 POLR3GO15318 223 aaPredicted RBP15.45■□□□□ 0.06
SNED1-205ENST00000405547 RAPGEF3O95398 923 aa15.45■□□□□ 0.06
SNED1-205ENST00000405547 SSBP05455 408 aaKnown RBP eCLIP15.45■□□□□ 0.06
SNED1-205ENST00000405547 MICALCLQ6ZW33 695 aa15.45■□□□□ 0.06
SNED1-205ENST00000405547 YEATS4O95619 227 aa15.45■□□□□ 0.06
SNED1-205ENST00000405547 GUCY1B3Q02153 619 aa15.45■□□□□ 0.06
SNED1-205ENST00000405547 SMC5Q8IY18 1101 aa15.45■□□□□ 0.06
SNED1-205ENST00000405547 KRT222Q8N1A0 295 aa15.45■□□□□ 0.06
SNED1-205ENST00000405547 RAB34Q9BZG1 259 aa15.44■□□□□ 0.06
SNED1-205ENST00000405547 RAI14Q9P0K7 980 aa15.44■□□□□ 0.06
SNED1-205ENST00000405547 SSRP1Q08945 709 aaKnown RBP15.44■□□□□ 0.06
SNED1-205ENST00000405547 IQCA1Q86XH1 822 aa15.44■□□□□ 0.06
SNED1-205ENST00000405547 RNF41Q9H4P4 317 aaPredicted RBP15.44■□□□□ 0.06
SNED1-205ENST00000405547 GIMAP6Q6P9H5 292 aa15.44■□□□□ 0.06
SNED1-205ENST00000405547 CACNA2D4Q7Z3S7 1137 aa15.44■□□□□ 0.06
SNED1-205ENST00000405547 FAM200AQ8TCP9 573 aa15.44■□□□□ 0.06
SNED1-205ENST00000405547 CCDC8Q9H0W5 538 aaPredicted RBP15.44■□□□□ 0.06
SNED1-205ENST00000405547 PANK2Q9BZ23 570 aa15.44■□□□□ 0.06
SNED1-205ENST00000405547 SLC26A8Q96RN1 970 aa15.44■□□□□ 0.06
SNED1-205ENST00000405547 NOS1P29475 1434 aa15.43■□□□□ 0.06
SNED1-205ENST00000405547 MAP3K12Q12852 859 aa15.43■□□□□ 0.06
SNED1-205ENST00000405547 NEK1Q96PY6 1258 aa15.43■□□□□ 0.06
SNED1-205ENST00000405547 SEC63Q9UGP8 760 aaKnown RBP15.43■□□□□ 0.06
SNED1-205ENST00000405547 NME9Q86XW9 330 aa15.43■□□□□ 0.06
SNED1-205ENST00000405547 WASLO00401 505 aaPredicted RBP15.43■□□□□ 0.06
SNED1-205ENST00000405547 TUBB4AP04350 444 aa15.43■□□□□ 0.06
SNED1-205ENST00000405547 TSG101Q99816 390 aa15.43■□□□□ 0.06
SNED1-205ENST00000405547 EZRP15311 586 aaKnown RBP15.43■□□□□ 0.06
SNED1-205ENST00000405547 CCT2P78371 535 aaKnown RBP15.43■□□□□ 0.06
SNED1-205ENST00000405547 PLCD4Q9BRC7 762 aa15.43■□□□□ 0.06
SNED1-205ENST00000405547 NAA15Q9BXJ9 866 aaKnown RBP15.43■□□□□ 0.06
SNED1-205ENST00000405547 PPP1R42Q7Z4L9 355 aa15.43■□□□□ 0.06
SNED1-205ENST00000405547 CTCFLQ8NI51 663 aaPredicted RBP15.43■□□□□ 0.06
SNED1-205ENST00000405547 WWC2Q6AWC2 1192 aa15.42■□□□□ 0.06
SNED1-205ENST00000405547 EMILIN1Q9Y6C2 1016 aa15.42■□□□□ 0.06
SNED1-205ENST00000405547 IFIT5Q13325 482 aaKnown RBP15.42■□□□□ 0.06
SNED1-205ENST00000405547 SEPT11Q9NVA2 429 aaKnown RBP15.42■□□□□ 0.06
SNED1-205ENST00000405547 ANKRD44Q8N8A2 993 aa15.42■□□□□ 0.06
SNED1-205ENST00000405547 ABCF2Q9UG63 623 aa15.42■□□□□ 0.06
SNED1-205ENST00000405547 LUZP1Q86V48 1076 aa15.42■□□□□ 0.06
SNED1-205ENST00000405547 PIK3C2GO75747 1445 aa15.42■□□□□ 0.06
SNED1-205ENST00000405547 C14orf93Q9H972 538 aaKnown RBP15.42■□□□□ 0.06
SNED1-205ENST00000405547 POLR3AO14802 1390 aaPredicted RBP15.42■□□□□ 0.06
SNED1-205ENST00000405547 USP48Q86UV5 1035 aa15.42■□□□□ 0.06
SNED1-205ENST00000405547 TMEM132AQ24JP5 1023 aa15.42■□□□□ 0.06
SNED1-205ENST00000405547 ARFGAP3Q9NP61 516 aa15.42■□□□□ 0.06
SNED1-205ENST00000405547 TIGD1Q96MW7 591 aa15.41■□□□□ 0.06
SNED1-205ENST00000405547 MYD88Q99836 296 aa15.41■□□□□ 0.06
SNED1-205ENST00000405547 ESYT1Q9BSJ8 1104 aa15.41■□□□□ 0.06
SNED1-205ENST00000405547 PDE1AP54750 535 aa15.41■□□□□ 0.06
SNED1-205ENST00000405547 CCDC102BQ68D86 513 aa15.41■□□□□ 0.06
SNED1-205ENST00000405547 CETN2P41208 172 aa15.41■□□□□ 0.06
SNED1-205ENST00000405547 EHBP1Q8NDI1 1231 aa15.41■□□□□ 0.06
SNED1-205ENST00000405547 POGZQ7Z3K3 1410 aa15.41■□□□□ 0.06
SNED1-205ENST00000405547 GIMAP7Q8NHV1 300 aa15.41■□□□□ 0.06
SNED1-205ENST00000405547 KCNG4Q8TDN1 519 aa15.41■□□□□ 0.06
SNED1-205ENST00000405547 DYDC1Q8WWB3 177 aa15.41■□□□□ 0.06
SNED1-205ENST00000405547 ZMYND15Q9H091 742 aa15.41■□□□□ 0.06
SNED1-205ENST00000405547 ANKLE2Q86XL3 938 aa15.41■□□□□ 0.06
SNED1-205ENST00000405547 ADGBQ8N7X0 1667 aa15.41■□□□□ 0.06
SNED1-205ENST00000405547 ZMYM4Q5VZL5 1548 aa15.41■□□□□ 0.06
SNED1-205ENST00000405547 SPDYE4A6NLX3 237 aa15.4■□□□□ 0.06
SNED1-205ENST00000405547 PRIM1P49642 420 aaKnown RBP15.4■□□□□ 0.06
SNED1-205ENST00000405547 TUBB4BP68371 445 aa15.4■□□□□ 0.06
SNED1-205ENST00000405547 SMARCC1Q92922 1105 aaPredicted RBP15.4■□□□□ 0.06
SNED1-205ENST00000405547 INTS4Q96HW7 963 aaKnown RBP15.4■□□□□ 0.06
SNED1-205ENST00000405547 LARP6Q9BRS8 491 aaKnown RBP15.4■□□□□ 0.06
SNED1-205ENST00000405547 MINDY4BA8MYZ0 360 aa15.4■□□□□ 0.06
SNED1-205ENST00000405547 ANO6Q4KMQ2 910 aa15.4■□□□□ 0.06
SNED1-205ENST00000405547 PRDM11Q9NQV5 511 aa15.4■□□□□ 0.06
SNED1-205ENST00000405547 ALS2CR12Q96Q35 445 aa15.4■□□□□ 0.06
SNED1-205ENST00000405547 IFIT3O14879 490 aaKnown RBP15.4■□□□□ 0.06
SNED1-205ENST00000405547 TTF1Q15361 905 aaPredicted RBP15.4■□□□□ 0.06
SNED1-205ENST00000405547 BIN1O00499 593 aa15.39■□□□□ 0.05
SNED1-205ENST00000405547 MAP2K1Q02750 393 aaPredicted RBP15.39■□□□□ 0.05
SNED1-205ENST00000405547 CTR9Q6PD62 1173 aa15.39■□□□□ 0.05
SNED1-205ENST00000405547 CATIPQ7Z7H3 387 aa15.39■□□□□ 0.05
SNED1-205ENST00000405547 A0A087WZG4 1122 aa15.39■□□□□ 0.05
SNED1-205ENST00000405547 ANKRD62A6NC57 917 aa15.39■□□□□ 0.05
SNED1-205ENST00000405547 UBASH3AP57075 661 aa15.39■□□□□ 0.05
SNED1-205ENST00000405547 SRRTQ9BXP5 876 aaKnown RBP15.39■□□□□ 0.05
SNED1-205ENST00000405547 CNPY2Q9Y2B0 182 aa15.39■□□□□ 0.05
SNED1-205ENST00000405547 KIF20AO95235 890 aa15.39■□□□□ 0.05
SNED1-205ENST00000405547 GTF2F1P35269 517 aaKnown RBP eCLIP15.39■□□□□ 0.05
SNED1-205ENST00000405547 GNG11P61952 73 aa15.39■□□□□ 0.05
SNED1-205ENST00000405547 CAVIN4Q5BKX8 364 aa15.39■□□□□ 0.05
SNED1-205ENST00000405547 MEX3CQ5U5Q3 659 aaKnown RBP15.39■□□□□ 0.05
SNED1-205ENST00000405547 KDM5BQ9UGL1 1544 aa15.39■□□□□ 0.05
SNED1-205ENST00000405547 CNKSR2Q8WXI2 1034 aa15.38■□□□□ 0.05
SNED1-205ENST00000405547 MAP3K2Q9Y2U5 619 aa15.38■□□□□ 0.05
SNED1-205ENST00000405547 SKILP12757 684 aa15.38■□□□□ 0.05
SNED1-205ENST00000405547 IARSP41252 1262 aaKnown RBP15.38■□□□□ 0.05
SNED1-205ENST00000405547 USP16Q9Y5T5 823 aa15.38■□□□□ 0.05
SNED1-205ENST00000405547 ZNF652Q9Y2D9 606 aa15.38■□□□□ 0.05
SNED1-205ENST00000405547 SYKP43405 635 aa15.38■□□□□ 0.05
SNED1-205ENST00000405547 RBM25P49756 843 aaKnown RBP15.38■□□□□ 0.05
SNED1-205ENST00000405547 IFFO1Q0D2I5 559 aa15.38■□□□□ 0.05
SNED1-205ENST00000405547 FAM114A1Q8IWE2 563 aa15.38■□□□□ 0.05
SNED1-205ENST00000405547 SPINK5Q9NQ38 1064 aaPredicted RBP15.38■□□□□ 0.05
SNED1-205ENST00000405547 ORC3Q9UBD5 711 aaPredicted RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms