RNA–Protein interactions for RNA: ENST00000405506.2

XRCC6-204, Transcript of X-ray repair cross complementing 6, humanhuman

TSL 5 BASIC

Gene XRCC6, Length 1,958 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-204ENST00000405506 SKOR2Q2VWA4 1001 aaPredicted RBP12.8□□□□□ -0.36
XRCC6-204ENST00000405506 OTUD7AQ8TE49 926 aaPredicted RBP12.8□□□□□ -0.36
XRCC6-204ENST00000405506 XAGE3Q8WTP9 111 aa12.8□□□□□ -0.36
XRCC6-204ENST00000405506 PIGBQ92521 554 aa12.8□□□□□ -0.36
XRCC6-204ENST00000405506 SPATA31A5Q5VU36 1347 aa12.79□□□□□ -0.36
XRCC6-204ENST00000405506 SPATA31A7Q8IWB4 1347 aa12.79□□□□□ -0.36
XRCC6-204ENST00000405506 GOLGA6L3A6NEY3 463 aa12.79□□□□□ -0.36
XRCC6-204ENST00000405506 NBPF26B4DH59 902 aa12.79□□□□□ -0.36
XRCC6-204ENST00000405506 PTCD1O75127 700 aaKnown RBP12.79□□□□□ -0.36
XRCC6-204ENST00000405506 NBPF14Q5TI25 921 aa12.79□□□□□ -0.36
XRCC6-204ENST00000405506 NBPF10Q6P3W6 841 aaKnown RBP12.79□□□□□ -0.36
XRCC6-204ENST00000405506 COPS6Q7L5N1 327 aa12.79□□□□□ -0.36
XRCC6-204ENST00000405506 NBPF15Q8N660 670 aa12.79□□□□□ -0.36
XRCC6-204ENST00000405506 GBP4Q96PP9 640 aa12.79□□□□□ -0.36
XRCC6-204ENST00000405506 RBM42Q9BTD8 480 aaKnown RBP12.79□□□□□ -0.36
XRCC6-204ENST00000405506 TMOD3Q9NYL9 352 aa12.79□□□□□ -0.36
XRCC6-204ENST00000405506 ASAP1Q9ULH1 1129 aa12.79□□□□□ -0.36
XRCC6-204ENST00000405506 NUP188Q5SRE5 1749 aa12.79□□□□□ -0.36
XRCC6-204ENST00000405506 JCADQ9P266 1359 aa12.79□□□□□ -0.36
XRCC6-204ENST00000405506 EXOC5O00471 708 aa12.78□□□□□ -0.36
XRCC6-204ENST00000405506 UBTFL1P0CB47 393 aaPredicted RBP12.78□□□□□ -0.36
XRCC6-204ENST00000405506 ATP8B2P98198 1209 aa12.78□□□□□ -0.36
XRCC6-204ENST00000405506 CWF19L2Q2TBE0 894 aaKnown RBP12.78□□□□□ -0.36
XRCC6-204ENST00000405506 CERKQ8TCT0 537 aa12.78□□□□□ -0.36
XRCC6-204ENST00000405506 TUBGCP6Q96RT7 1819 aa12.78□□□□□ -0.36
XRCC6-204ENST00000405506 IL17RAQ96F46 866 aa12.78□□□□□ -0.36
XRCC6-204ENST00000405506 BCL9O00512 1426 aa12.77□□□□□ -0.36
XRCC6-204ENST00000405506 SMARCA5O60264 1052 aaPredicted RBP12.77□□□□□ -0.37
XRCC6-204ENST00000405506 IGKV5-2P06315 115 aa12.77□□□□□ -0.37
XRCC6-204ENST00000405506 PDE1AP54750 535 aa12.77□□□□□ -0.37
XRCC6-204ENST00000405506 ATG3Q9NT62 314 aa12.77□□□□□ -0.37
XRCC6-204ENST00000405506 BCL9LQ86UU0 1499 aa12.77□□□□□ -0.37
XRCC6-204ENST00000405506 APBB1O00213 710 aa12.76□□□□□ -0.37
XRCC6-204ENST00000405506 ALDH1L1O75891 902 aa12.76□□□□□ -0.37
XRCC6-204ENST00000405506 A1BGP04217 495 aa12.76□□□□□ -0.37
XRCC6-204ENST00000405506 MRE11P49959 708 aa12.76□□□□□ -0.37
XRCC6-204ENST00000405506 CASC1Q6TDU7 716 aa12.76□□□□□ -0.37
XRCC6-204ENST00000405506 STAP2Q9UGK3 403 aa12.76□□□□□ -0.37
XRCC6-204ENST00000405506 THRAP3Q9Y2W1 955 aaKnown RBP12.76□□□□□ -0.37
XRCC6-204ENST00000405506 REC8O95072 547 aa12.76□□□□□ -0.37
XRCC6-204ENST00000405506 DDX58O95786 925 aaKnown RBP12.76□□□□□ -0.37
XRCC6-204ENST00000405506 CYP2E1P05181 493 aaPredicted RBP12.76□□□□□ -0.37
XRCC6-204ENST00000405506 RIC3Q7Z5B4 369 aa12.76□□□□□ -0.37
XRCC6-204ENST00000405506 C8orf37Q96NL8 207 aa12.76□□□□□ -0.37
XRCC6-204ENST00000405506 TJP1Q07157 1748 aa12.75□□□□□ -0.37
XRCC6-204ENST00000405506 MARCH10Q8NA82 808 aaPredicted RBP12.75□□□□□ -0.37
XRCC6-204ENST00000405506 LINS1Q8NG48 757 aa12.75□□□□□ -0.37
XRCC6-204ENST00000405506 EXOC6BQ9Y2D4 811 aa12.75□□□□□ -0.37
XRCC6-204ENST00000405506 CCDC9Q9Y3X0 531 aaKnown RBP12.75□□□□□ -0.37
XRCC6-204ENST00000405506 IBTKQ9P2D0 1353 aaPredicted RBP12.74□□□□□ -0.37
XRCC6-204ENST00000405506 ERC2O15083 957 aa12.74□□□□□ -0.37
XRCC6-204ENST00000405506 EPB41L2O43491 1005 aaKnown RBP12.74□□□□□ -0.37
XRCC6-204ENST00000405506 POLA2Q14181 598 aa12.74□□□□□ -0.37
XRCC6-204ENST00000405506 DDB1Q16531 1140 aa12.74□□□□□ -0.37
XRCC6-204ENST00000405506 UNC5CLQ8IV45 518 aa12.74□□□□□ -0.37
XRCC6-204ENST00000405506 SLC4A9Q96Q91 983 aa12.74□□□□□ -0.37
XRCC6-204ENST00000405506 METTL22Q9BUU2 404 aaPredicted RBP12.74□□□□□ -0.37
XRCC6-204ENST00000405506 CWC22Q9HCG8 908 aaKnown RBP12.74□□□□□ -0.37
XRCC6-204ENST00000405506 BARGINQ6ZT62 677 aa12.74□□□□□ -0.37
XRCC6-204ENST00000405506 TTLL7Q6ZT98 887 aa12.74□□□□□ -0.37
XRCC6-204ENST00000405506 ANKRD13DQ6ZTN6 518 aa12.74□□□□□ -0.37
XRCC6-204ENST00000405506 PPP1R42Q7Z4L9 355 aa12.74□□□□□ -0.37
XRCC6-204ENST00000405506 SSH3Q8TE77 659 aa12.74□□□□□ -0.37
XRCC6-204ENST00000405506 MYD88Q99836 296 aa12.74□□□□□ -0.37
XRCC6-204ENST00000405506 CDCA7Q9BWT1 371 aaPredicted RBP12.74□□□□□ -0.37
XRCC6-204ENST00000405506 RTN4Q9NQC3 1192 aaKnown RBP12.74□□□□□ -0.37
XRCC6-204ENST00000405506 AOX1Q06278 1338 aa12.73□□□□□ -0.37
XRCC6-204ENST00000405506 ERBB4Q15303 1308 aa12.73□□□□□ -0.37
XRCC6-204ENST00000405506 NEURL1BA8MQ27 555 aa12.73□□□□□ -0.37
XRCC6-204ENST00000405506 PRIM1P49642 420 aaKnown RBP12.73□□□□□ -0.37
XRCC6-204ENST00000405506 NUCB2P80303 420 aa12.73□□□□□ -0.37
XRCC6-204ENST00000405506 DNAJC10Q8IXB1 793 aa12.73□□□□□ -0.37
XRCC6-204ENST00000405506 KAZALD1Q96I82 304 aa12.73□□□□□ -0.37
XRCC6-204ENST00000405506 NGLY1Q96IV0 654 aa12.73□□□□□ -0.37
XRCC6-204ENST00000405506 UTYO14607 1347 aa12.73□□□□□ -0.37
XRCC6-204ENST00000405506 SUCLG2Q96I99 432 aa12.72□□□□□ -0.37
XRCC6-204ENST00000405506 LRRCC1Q9C099 1032 aa12.72□□□□□ -0.37
XRCC6-204ENST00000405506 C9orf78Q9NZ63 289 aaPredicted RBP12.72□□□□□ -0.37
XRCC6-204ENST00000405506 GRM8O00222 908 aa12.72□□□□□ -0.37
XRCC6-204ENST00000405506 HSP90AA1P07900 732 aaKnown RBP12.72□□□□□ -0.37
XRCC6-204ENST00000405506 HSPA1LP34931 641 aa12.72□□□□□ -0.37
XRCC6-204ENST00000405506 SYTL4Q96C24 671 aaPredicted RBP12.72□□□□□ -0.37
XRCC6-204ENST00000405506 BAG4O95429 457 aaKnown RBP12.71□□□□□ -0.37
XRCC6-204ENST00000405506 SSFA2P28290 1259 aa12.71□□□□□ -0.37
XRCC6-204ENST00000405506 GCKRQ14397 625 aa12.71□□□□□ -0.37
XRCC6-204ENST00000405506 VPS72Q15906 364 aa12.71□□□□□ -0.37
XRCC6-204ENST00000405506 FAM98CQ17RN3 349 aaKnown RBP12.71□□□□□ -0.37
XRCC6-204ENST00000405506 FNBP4Q8N3X1 1017 aaPredicted RBP12.71□□□□□ -0.37
XRCC6-204ENST00000405506 PLBD2Q8NHP8 589 aa12.71□□□□□ -0.37
XRCC6-204ENST00000405506 JARID2Q92833 1246 aaPredicted RBP12.71□□□□□ -0.37
XRCC6-204ENST00000405506 ACSBG1Q96GR2 724 aa12.71□□□□□ -0.37
XRCC6-204ENST00000405506 ATP5J2-PTCD1G3V325 749 aa12.7□□□□□ -0.38
XRCC6-204ENST00000405506 SRGAP3O43295 1099 aa12.7□□□□□ -0.38
XRCC6-204ENST00000405506 ST18O60284 1047 aa12.7□□□□□ -0.38
XRCC6-204ENST00000405506 ANAPC15P60006 121 aa12.7□□□□□ -0.38
XRCC6-204ENST00000405506 VSIG10Q8N0Z9 540 aa12.7□□□□□ -0.38
XRCC6-204ENST00000405506 GZF1Q9H116 711 aaPredicted RBP12.7□□□□□ -0.38
XRCC6-204ENST00000405506 GRPEL1Q9HAV7 217 aa12.7□□□□□ -0.38
XRCC6-204ENST00000405506 SPATA31A6Q5VVP1 1343 aa12.7□□□□□ -0.38
XRCC6-204ENST00000405506 RAB11FIP3O75154 756 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms