RNA–Protein interactions for RNA: ENST00000403683.1

HIST2H3A-201, Transcript of histone cluster 2 H3 family member a, humanhuman

APPRIS P1 BASIC

Gene HIST2H3A, Length 1,656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3A-201ENST00000403683 LINC00116Q8NCU8 138 aa31.7■■■□□ 2.66
HIST2H3A-201ENST00000403683 LINS1Q8NG48 757 aa31.7■■■□□ 2.66
HIST2H3A-201ENST00000403683 ALDH1L1O75891 902 aa31.69■■■□□ 2.66
HIST2H3A-201ENST00000403683 RWDD1Q9H446 243 aaPredicted RBP31.69■■■□□ 2.66
HIST2H3A-201ENST00000403683 ATP10DQ9P241 1426 aa31.68■■■□□ 2.66
HIST2H3A-201ENST00000403683 CWF19L2Q2TBE0 894 aaKnown RBP31.68■■■□□ 2.66
HIST2H3A-201ENST00000403683 C9orf78Q9NZ63 289 aaPredicted RBP31.67■■■□□ 2.66
HIST2H3A-201ENST00000403683 UBTFL1P0CB47 393 aaPredicted RBP31.66■■■□□ 2.66
HIST2H3A-201ENST00000403683 USP44Q9H0E7 712 aa31.66■■■□□ 2.66
HIST2H3A-201ENST00000403683 GNAI2P04899 355 aa31.65■■■□□ 2.66
HIST2H3A-201ENST00000403683 CENPQQ7L2Z9 268 aaPredicted RBP31.65■■■□□ 2.66
HIST2H3A-201ENST00000403683 IGHDP01880 384 aa31.64■■■□□ 2.66
HIST2H3A-201ENST00000403683 DZIP3Q86Y13 1208 aaKnown RBP31.64■■■□□ 2.66
HIST2H3A-201ENST00000403683 EP400Q96L91 3159 aa31.64■■■□□ 2.66
HIST2H3A-201ENST00000403683 ATP5J2-PTCD1G3V325 749 aa31.64■■■□□ 2.65
HIST2H3A-201ENST00000403683 APBA3O96018 575 aa31.63■■■□□ 2.65
HIST2H3A-201ENST00000403683 IGKV5-2P06315 115 aa31.63■■■□□ 2.65
HIST2H3A-201ENST00000403683 EIF5P55010 431 aaKnown RBP31.63■■■□□ 2.65
HIST2H3A-201ENST00000403683 TBC1D2BQ9UPU7 963 aa31.63■■■□□ 2.65
HIST2H3A-201ENST00000403683 MAP3K15Q6ZN16 1313 aa31.62■■■□□ 2.65
HIST2H3A-201ENST00000403683 NEURL1BA8MQ27 555 aa31.62■■■□□ 2.65
HIST2H3A-201ENST00000403683 CNTNAP4Q9C0A0 1308 aa31.61■■■□□ 2.65
HIST2H3A-201ENST00000403683 ZNF831Q5JPB2 1677 aa31.61■■■□□ 2.65
HIST2H3A-201ENST00000403683 CICQ96RK0 1608 aaPredicted RBP31.6■■■□□ 2.65
HIST2H3A-201ENST00000403683 RC3H1Q5TC82 1133 aaKnown RBP31.6■■■□□ 2.65
HIST2H3A-201ENST00000403683 SLC27A3Q5K4L6 730 aa31.59■■■□□ 2.65
HIST2H3A-201ENST00000403683 NBPF7P0C2Y1 421 aaPredicted RBP31.58■■■□□ 2.65
HIST2H3A-201ENST00000403683 HDAC5Q9UQL6 1122 aa31.58■■■□□ 2.65
HIST2H3A-201ENST00000403683 LRRFIP2Q9Y608 721 aaKnown RBP31.58■■■□□ 2.65
HIST2H3A-201ENST00000403683 KDM2BQ8NHM5 1336 aa31.58■■■□□ 2.65
HIST2H3A-201ENST00000403683 GRM8O00222 908 aa31.57■■■□□ 2.65
HIST2H3A-201ENST00000403683 GNPATO15228 680 aa31.57■■■□□ 2.65
HIST2H3A-201ENST00000403683 HDAC1Q13547 482 aaPredicted RBP31.57■■■□□ 2.65
HIST2H3A-201ENST00000403683 GCKRQ14397 625 aa31.57■■■□□ 2.65
HIST2H3A-201ENST00000403683 N4BP2Q86UW6 1770 aaPredicted RBP31.57■■■□□ 2.64
HIST2H3A-201ENST00000403683 ARFGEF2Q9Y6D5 1785 aa31.57■■■□□ 2.64
HIST2H3A-201ENST00000403683 LY75O60449 1722 aa31.57■■■□□ 2.64
HIST2H3A-201ENST00000403683 A0A087WZG4 1122 aa31.57■■■□□ 2.64
HIST2H3A-201ENST00000403683 TCIRG1Q13488 830 aa31.57■■■□□ 2.64
HIST2H3A-201ENST00000403683 RPAP2Q8IXW5 612 aaPredicted RBP31.57■■■□□ 2.64
HIST2H3A-201ENST00000403683 LRRC4BQ9NT99 713 aa31.57■■■□□ 2.64
HIST2H3A-201ENST00000403683 AK7Q96M32 723 aa31.56■■■□□ 2.64
HIST2H3A-201ENST00000403683 COL5A3P25940 1745 aaPredicted RBP31.55■■■□□ 2.64
HIST2H3A-201ENST00000403683 ERVV-1B6SEH8 477 aa31.55■■■□□ 2.64
HIST2H3A-201ENST00000403683 HLFQ16534 295 aa31.55■■■□□ 2.64
HIST2H3A-201ENST00000403683 HSP90AB3PQ58FF7 597 aa31.55■■■□□ 2.64
HIST2H3A-201ENST00000403683 GIGYF2Q6Y7W6 1299 aaKnown RBP31.55■■■□□ 2.64
HIST2H3A-201ENST00000403683 CWC25Q9NXE8 425 aaPredicted RBP31.55■■■□□ 2.64
HIST2H3A-201ENST00000403683 RTCBQ9Y3I0 505 aaKnown RBP31.55■■■□□ 2.64
HIST2H3A-201ENST00000403683 CEP85Q6P2H3 762 aa31.54■■■□□ 2.64
HIST2H3A-201ENST00000403683 COL15A1P39059 1388 aa31.54■■■□□ 2.64
HIST2H3A-201ENST00000403683 RPS6KA4O75676 772 aa31.54■■■□□ 2.64
HIST2H3A-201ENST00000403683 TXNRD1Q16881 649 aa31.54■■■□□ 2.64
HIST2H3A-201ENST00000403683 ANKRD44Q8N8A2 993 aa31.54■■■□□ 2.64
HIST2H3A-201ENST00000403683 MYH14Q7Z406 1995 aaKnown RBP31.53■■■□□ 2.64
HIST2H3A-201ENST00000403683 PLSCR1O15162 318 aa31.53■■■□□ 2.64
HIST2H3A-201ENST00000403683 HMGB2P26583 209 aaKnown RBP31.53■■■□□ 2.64
HIST2H3A-201ENST00000403683 PELP1Q8IZL8 1130 aaKnown RBP31.52■■■□□ 2.64
HIST2H3A-201ENST00000403683 CCDC191Q8NCU4 936 aa31.52■■■□□ 2.64
HIST2H3A-201ENST00000403683 HMMRO75330 724 aa31.51■■■□□ 2.64
HIST2H3A-201ENST00000403683 SIRT2Q8IXJ6 389 aa31.51■■■□□ 2.64
HIST2H3A-201ENST00000403683 GPTP24298 496 aa31.51■■■□□ 2.63
HIST2H3A-201ENST00000403683 RREB1Q92766 1687 aa31.5■■■□□ 2.63
HIST2H3A-201ENST00000403683 NUP188Q5SRE5 1749 aa31.5■■■□□ 2.63
HIST2H3A-201ENST00000403683 JARID2Q92833 1246 aaPredicted RBP31.5■■■□□ 2.63
HIST2H3A-201ENST00000403683 ISCA1Q9BUE6 129 aa31.5■■■□□ 2.63
HIST2H3A-201ENST00000403683 SMIM5Q71RC9 77 aa31.49■■■□□ 2.63
HIST2H3A-201ENST00000403683 UBE3BQ7Z3V4 1068 aa31.49■■■□□ 2.63
HIST2H3A-201ENST00000403683 UTYO14607 1347 aa31.48■■■□□ 2.63
HIST2H3A-201ENST00000403683 PHF14O94880 888 aa31.48■■■□□ 2.63
HIST2H3A-201ENST00000403683 CAMTA2O94983 1202 aa31.48■■■□□ 2.63
HIST2H3A-201ENST00000403683 ZNF652Q9Y2D9 606 aa31.48■■■□□ 2.63
HIST2H3A-201ENST00000403683 RTL5Q5HYW3 569 aaPredicted RBP31.47■■■□□ 2.63
HIST2H3A-201ENST00000403683 PROM2Q8N271 834 aa31.47■■■□□ 2.63
HIST2H3A-201ENST00000403683 IBTKQ9P2D0 1353 aaPredicted RBP31.47■■■□□ 2.63
HIST2H3A-201ENST00000403683 AFDNP55196 1824 aaKnown RBP31.46■■■□□ 2.63
HIST2H3A-201ENST00000403683 ATP8B2P98198 1209 aa31.46■■■□□ 2.63
HIST2H3A-201ENST00000403683 TRIM28Q13263 835 aaKnown RBP31.46■■■□□ 2.63
HIST2H3A-201ENST00000403683 SF3B2Q13435 895 aaKnown RBP31.46■■■□□ 2.63
HIST2H3A-201ENST00000403683 SUCLG2Q96I99 432 aa31.46■■■□□ 2.63
HIST2H3A-201ENST00000403683 ZPR1O75312 459 aa31.45■■■□□ 2.63
HIST2H3A-201ENST00000403683 TRAPPC3LQ5T215 181 aa31.45■■■□□ 2.63
HIST2H3A-201ENST00000403683 C4BP0C0L5 1744 aa31.44■■■□□ 2.62
HIST2H3A-201ENST00000403683 TAF1LQ8IZX4 1826 aa31.44■■■□□ 2.62
HIST2H3A-201ENST00000403683 GCC1Q96CN9 775 aa31.44■■■□□ 2.62
HIST2H3A-201ENST00000403683 RFC4P35249 363 aa31.43■■■□□ 2.62
HIST2H3A-201ENST00000403683 H7C1W4 665 aa31.42■■■□□ 2.62
HIST2H3A-201ENST00000403683 PPP1R42Q7Z4L9 355 aa31.42■■■□□ 2.62
HIST2H3A-201ENST00000403683 NLRP10Q86W26 655 aa31.42■■■□□ 2.62
HIST2H3A-201ENST00000403683 ARHGEF1Q92888 912 aaKnown RBP31.42■■■□□ 2.62
HIST2H3A-201ENST00000403683 PNMA6EA0A0J9YXQ4 647 aa31.41■■■□□ 2.62
HIST2H3A-201ENST00000403683 SRGAP3O43295 1099 aa31.41■■■□□ 2.62
HIST2H3A-201ENST00000403683 NARFQ9UHQ1 456 aa31.41■■■□□ 2.62
HIST2H3A-201ENST00000403683 SMC5Q8IY18 1101 aa31.41■■■□□ 2.62
HIST2H3A-201ENST00000403683 BICC1Q9H694 974 aaKnown RBP31.41■■■□□ 2.62
HIST2H3A-201ENST00000403683 CLEC4GQ6UXB4 293 aa31.4■■■□□ 2.62
HIST2H3A-201ENST00000403683 ZNF34Q8IZ26 560 aa31.4■■■□□ 2.62
HIST2H3A-201ENST00000403683 NIP7Q9Y221 180 aaKnown RBP eCLIP31.4■■■□□ 2.62
HIST2H3A-201ENST00000403683 USPL1Q5W0Q7 1092 aa31.39■■■□□ 2.62
HIST2H3A-201ENST00000403683 AMIGO3Q86WK7 504 aa31.39■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms