RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 TATP17735 454 aaPredicted RBP24.02■■□□□ 1.44
CCDC47-202ENST00000403162 FKBP5Q13451 457 aaPredicted RBP24.02■■□□□ 1.44
CCDC47-202ENST00000403162 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.02■■□□□ 1.44
CCDC47-202ENST00000403162 MCM5P33992 734 aa24.01■■□□□ 1.43
CCDC47-202ENST00000403162 C8orf37Q96NL8 207 aa24.01■■□□□ 1.43
CCDC47-202ENST00000403162 AMOTQ4VCS5 1084 aa24.01■■□□□ 1.43
CCDC47-202ENST00000403162 RILPL2Q969X0 211 aa24.01■■□□□ 1.43
CCDC47-202ENST00000403162 TRIM6-TRIM34B2RNG4 842 aa24■■□□□ 1.43
CCDC47-202ENST00000403162 LRP6O75581 1613 aa24■■□□□ 1.43
CCDC47-202ENST00000403162 FOXD4L5Q5VV16 416 aaPredicted RBP23.99■■□□□ 1.43
CCDC47-202ENST00000403162 FOXD4L4Q8WXT5 416 aaPredicted RBP23.99■■□□□ 1.43
CCDC47-202ENST00000403162 NGLY1Q96IV0 654 aa23.99■■□□□ 1.43
CCDC47-202ENST00000403162 ZKSCAN5Q9Y2L8 839 aa23.99■■□□□ 1.43
CCDC47-202ENST00000403162 MEGF6O75095 1541 aa23.99■■□□□ 1.43
CCDC47-202ENST00000403162 ZNF530Q6P9A1 599 aaPredicted RBP23.98■■□□□ 1.43
CCDC47-202ENST00000403162 GNAT3A8MTJ3 354 aa23.98■■□□□ 1.43
CCDC47-202ENST00000403162 SYAP1Q96A49 352 aaPredicted RBP23.98■■□□□ 1.43
CCDC47-202ENST00000403162 LRRFIP2Q9Y608 721 aaKnown RBP23.98■■□□□ 1.43
CCDC47-202ENST00000403162 MEX3CQ5U5Q3 659 aaKnown RBP23.97■■□□□ 1.43
CCDC47-202ENST00000403162 BABAM1Q9NWV8 329 aa23.97■■□□□ 1.43
CCDC47-202ENST00000403162 CCDC39Q9UFE4 941 aa23.97■■□□□ 1.43
CCDC47-202ENST00000403162 MAP3K5Q99683 1374 aa23.97■■□□□ 1.43
CCDC47-202ENST00000403162 SLIT2O94813 1529 aa23.96■■□□□ 1.43
CCDC47-202ENST00000403162 UNC5CLQ8IV45 518 aa23.96■■□□□ 1.43
CCDC47-202ENST00000403162 SSH3Q8TE77 659 aa23.95■■□□□ 1.42
CCDC47-202ENST00000403162 HSPA4P34932 840 aa23.95■■□□□ 1.42
CCDC47-202ENST00000403162 USP44Q9H0E7 712 aa23.95■■□□□ 1.42
CCDC47-202ENST00000403162 TSPY26PQ9H489 355 aa23.95■■□□□ 1.42
CCDC47-202ENST00000403162 SPG7Q9UQ90 795 aa23.95■■□□□ 1.42
CCDC47-202ENST00000403162 NRAPQ86VF7 1730 aa23.94■■□□□ 1.42
CCDC47-202ENST00000403162 IL2RBP14784 551 aa23.94■■□□□ 1.42
CCDC47-202ENST00000403162 C1orf141Q5JVX7 400 aa23.94■■□□□ 1.42
CCDC47-202ENST00000403162 WDR33Q9C0J8 1336 aaKnown RBP23.94■■□□□ 1.42
CCDC47-202ENST00000403162 NWD2Q9ULI1 1742 aa23.94■■□□□ 1.42
CCDC47-202ENST00000403162 RAB11FIP3O75154 756 aa23.93■■□□□ 1.42
CCDC47-202ENST00000403162 UBTFL1P0CB47 393 aaPredicted RBP23.93■■□□□ 1.42
CCDC47-202ENST00000403162 CSPP1Q1MSJ5 1256 aa23.93■■□□□ 1.42
CCDC47-202ENST00000403162 AKAP4Q5JQC9 854 aa23.93■■□□□ 1.42
CCDC47-202ENST00000403162 UPF3BQ9BZI7 483 aaKnown RBP23.93■■□□□ 1.42
CCDC47-202ENST00000403162 PDCL3Q9H2J4 239 aa23.93■■□□□ 1.42
CCDC47-202ENST00000403162 PHF14O94880 888 aa23.92■■□□□ 1.42
CCDC47-202ENST00000403162 NOL8Q76FK4 1167 aaKnown RBP23.92■■□□□ 1.42
CCDC47-202ENST00000403162 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.92■■□□□ 1.421e-8■■■□□ 17.3
CCDC47-202ENST00000403162 OVOS2A0A0G2JMS6 1433 aa23.92■■□□□ 1.42
CCDC47-202ENST00000403162 CCDC9Q9Y3X0 531 aaKnown RBP23.92■■□□□ 1.42
CCDC47-202ENST00000403162 PLEKHG2Q9H7P9 1386 aa23.91■■□□□ 1.42
CCDC47-202ENST00000403162 TMEM87AQ8NBN3 555 aa23.91■■□□□ 1.42
CCDC47-202ENST00000403162 IL25Q9H293 177 aa23.91■■□□□ 1.42
CCDC47-202ENST00000403162 PARP4Q9UKK3 1724 aaKnown RBP23.9■■□□□ 1.42
CCDC47-202ENST00000403162 POLA2Q14181 598 aa23.9■■□□□ 1.42
CCDC47-202ENST00000403162 TAF7Q15545 349 aaPredicted RBP23.9■■□□□ 1.42
CCDC47-202ENST00000403162 FNBP4Q8N3X1 1017 aaPredicted RBP23.9■■□□□ 1.42
CCDC47-202ENST00000403162 NECTIN2Q92692 538 aa23.9■■□□□ 1.42
CCDC47-202ENST00000403162 RAD50Q92878 1312 aa23.89■■□□□ 1.42
CCDC47-202ENST00000403162 IL17REQ8NFR9 667 aa23.89■■□□□ 1.42
CCDC47-202ENST00000403162 R3HCC1Q9Y3T6 440 aaKnown RBP23.89■■□□□ 1.42
CCDC47-202ENST00000403162 RNF214Q8ND24 703 aa23.89■■□□□ 1.41
CCDC47-202ENST00000403162 ZCRB1Q8TBF4 217 aaKnown RBP23.89■■□□□ 1.41
CCDC47-202ENST00000403162 SPATA31A1Q5TZJ5 1347 aa23.88■■□□□ 1.41
CCDC47-202ENST00000403162 PI4K2BQ8TCG2 481 aa23.88■■□□□ 1.41
CCDC47-202ENST00000403162 IL1RAPL2Q9NP60 686 aa23.88■■□□□ 1.41
CCDC47-202ENST00000403162 BCL9LQ86UU0 1499 aa23.88■■□□□ 1.41
CCDC47-202ENST00000403162 RPAP1Q9BWH6 1393 aaPredicted RBP23.88■■□□□ 1.41
CCDC47-202ENST00000403162 MPRIPQ6WCQ1 1025 aa23.88■■□□□ 1.41
CCDC47-202ENST00000403162 USP48Q86UV5 1035 aa23.88■■□□□ 1.41
CCDC47-202ENST00000403162 USP21Q9UK80 565 aa23.88■■□□□ 1.41
CCDC47-202ENST00000403162 SPATA31A5Q5VU36 1347 aa23.87■■□□□ 1.41
CCDC47-202ENST00000403162 SPATA31A7Q8IWB4 1347 aa23.87■■□□□ 1.41
CCDC47-202ENST00000403162 SGSM2O43147 1006 aa23.87■■□□□ 1.41
CCDC47-202ENST00000403162 PKD1L3Q7Z443 1732 aa23.87■■□□□ 1.41
CCDC47-202ENST00000403162 TCHHQ07283 1943 aa23.87■■□□□ 1.41
CCDC47-202ENST00000403162 PHKG2P15735 406 aa23.86■■□□□ 1.41
CCDC47-202ENST00000403162 LGR6Q9HBX8 967 aa23.86■■□□□ 1.41
CCDC47-202ENST00000403162 GADD45BO75293 160 aaPredicted RBP23.86■■□□□ 1.41
CCDC47-202ENST00000403162 PPP1R42Q7Z4L9 355 aa23.86■■□□□ 1.41
CCDC47-202ENST00000403162 NUTM1Q86Y26 1132 aa23.86■■□□□ 1.41
CCDC47-202ENST00000403162 IFNL2Q8IZJ0 200 aa23.86■■□□□ 1.41
CCDC47-202ENST00000403162 FAM184AQ8NB25 1140 aa23.86■■□□□ 1.41
CCDC47-202ENST00000403162 RHPN1Q8TCX5 695 aa23.86■■□□□ 1.41
CCDC47-202ENST00000403162 FBXO41Q8TF61 875 aa23.86■■□□□ 1.41
CCDC47-202ENST00000403162 TTC14Q96N46 770 aa23.86■■□□□ 1.41
CCDC47-202ENST00000403162 CYP27B1O15528 508 aa23.85■■□□□ 1.41
CCDC47-202ENST00000403162 UVSSAQ2YD98 709 aa23.85■■□□□ 1.41
CCDC47-202ENST00000403162 HDGFL1Q5TGJ6 251 aa23.85■■□□□ 1.41
CCDC47-202ENST00000403162 KIF1BPQ96EK5 621 aa23.85■■□□□ 1.41
CCDC47-202ENST00000403162 THRAP3Q9Y2W1 955 aaKnown RBP23.85■■□□□ 1.41
CCDC47-202ENST00000403162 SNX14Q9Y5W7 946 aa23.85■■□□□ 1.41
CCDC47-202ENST00000403162 SURF6O75683 361 aaKnown RBP23.84■■□□□ 1.41
CCDC47-202ENST00000403162 AFF2P51816 1311 aa23.84■■□□□ 1.41
CCDC47-202ENST00000403162 PCDH11XQ9BZA7 1347 aa23.84■■□□□ 1.41
CCDC47-202ENST00000403162 PCDH11YQ9BZA8 1340 aa23.84■■□□□ 1.41
CCDC47-202ENST00000403162 RNMTO43148 476 aaKnown RBP23.84■■□□□ 1.41
CCDC47-202ENST00000403162 VPS72Q15906 364 aa23.84■■□□□ 1.41
CCDC47-202ENST00000403162 LSG1Q9H089 658 aaKnown RBP23.84■■□□□ 1.41
CCDC47-202ENST00000403162 GDPD2Q9HCC8 539 aa23.84■■□□□ 1.41
CCDC47-202ENST00000403162 DISP2A7MBM2 1401 aa23.83■■□□□ 1.41
CCDC47-202ENST00000403162 CEMIPQ8WUJ3 1361 aa23.83■■□□□ 1.41
CCDC47-202ENST00000403162 CNTROBQ8N137 903 aa23.83■■□□□ 1.41
CCDC47-202ENST00000403162 DDX54Q8TDD1 881 aaKnown RBP23.83■■□□□ 1.41
CCDC47-202ENST00000403162 PHAXQ9H814 394 aaKnown RBP23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms