RNA–Protein interactions for RNA: ENST00000400907.6

RERE-203, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 5 BASIC

Gene RERE, Length 2,973 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-203ENST00000400907 PTMSP20962 102 aa9.71□□□□□ -0.85
RERE-203ENST00000400907 QTRT2Q9H974 415 aaKnown RBP9.71□□□□□ -0.85
RERE-203ENST00000400907 ZBTB40Q9NUA8 1239 aa9.71□□□□□ -0.85
RERE-203ENST00000400907 COL18A1P39060 1754 aa9.71□□□□□ -0.86
RERE-203ENST00000400907 LRP6O75581 1613 aa9.71□□□□□ -0.86
RERE-203ENST00000400907 ZNF445P59923 1031 aa9.71□□□□□ -0.86
RERE-203ENST00000400907 CHD1LQ86WJ1 897 aa9.71□□□□□ -0.86
RERE-203ENST00000400907 JARID2Q92833 1246 aaPredicted RBP9.71□□□□□ -0.86
RERE-203ENST00000400907 DCAF5Q96JK2 942 aa9.71□□□□□ -0.86
RERE-203ENST00000400907 PDLIM2Q96JY6 352 aa9.71□□□□□ -0.86
RERE-203ENST00000400907 MAP7D2Q96T17 732 aa9.71□□□□□ -0.86
RERE-203ENST00000400907 SPATA31A5Q5VU36 1347 aa9.7□□□□□ -0.86
RERE-203ENST00000400907 SPATA31A7Q8IWB4 1347 aa9.7□□□□□ -0.86
RERE-203ENST00000400907 PCDH11XQ9BZA7 1347 aa9.7□□□□□ -0.86
RERE-203ENST00000400907 PCDH11YQ9BZA8 1340 aa9.7□□□□□ -0.86
RERE-203ENST00000400907 VAMP4O75379 141 aa9.7□□□□□ -0.86
RERE-203ENST00000400907 CLEC17AQ6ZS10 378 aa9.7□□□□□ -0.86
RERE-203ENST00000400907 TBC1D9Q6ZT07 1266 aa9.7□□□□□ -0.86
RERE-203ENST00000400907 FNBP4Q8N3X1 1017 aaPredicted RBP9.7□□□□□ -0.86
RERE-203ENST00000400907 CHAMP1Q96JM3 812 aa9.7□□□□□ -0.86
RERE-203ENST00000400907 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.7□□□□□ -0.862e-7■■■□□ 17.9
RERE-203ENST00000400907 RBM27Q9P2N5 1060 aaKnown RBP9.7□□□□□ -0.86
RERE-203ENST00000400907 KIF16BQ96L93 1317 aa9.7□□□□□ -0.86
RERE-203ENST00000400907 PRAMEF22A3QJZ6 481 aa9.7□□□□□ -0.86
RERE-203ENST00000400907 MKRN3Q13064 507 aaKnown RBP9.69□□□□□ -0.86
RERE-203ENST00000400907 FOXD4L5Q5VV16 416 aaPredicted RBP9.69□□□□□ -0.86
RERE-203ENST00000400907 FOXD4L4Q8WXT5 416 aaPredicted RBP9.69□□□□□ -0.86
RERE-203ENST00000400907 SLC52A2Q9HAB3 445 aa9.69□□□□□ -0.86
RERE-203ENST00000400907 LMBRD1Q9NUN5 540 aa9.69□□□□□ -0.86
RERE-203ENST00000400907 CRYBG1Q9Y4K1 1723 aa9.69□□□□□ -0.86
RERE-203ENST00000400907 IPO8O15397 1037 aaKnown RBP9.69□□□□□ -0.86
RERE-203ENST00000400907 ANXA1P04083 346 aa9.69□□□□□ -0.86
RERE-203ENST00000400907 BMP2KLQ5H9B9 411 aa9.69□□□□□ -0.86
RERE-203ENST00000400907 CHMP4AQ9BY43 222 aa9.69□□□□□ -0.86
RERE-203ENST00000400907 ZKSCAN5Q9Y2L8 839 aa9.69□□□□□ -0.86
RERE-203ENST00000400907 PIP4K2AP48426 406 aaPredicted RBP9.69□□□□□ -0.86
RERE-203ENST00000400907 VPS72Q15906 364 aa9.69□□□□□ -0.86
RERE-203ENST00000400907 HS1BP3Q53T59 392 aa9.69□□□□□ -0.86
RERE-203ENST00000400907 SMAP1Q8IYB5 467 aaPredicted RBP9.69□□□□□ -0.86
RERE-203ENST00000400907 C16orf71Q8IYS4 520 aaPredicted RBP9.69□□□□□ -0.86
RERE-203ENST00000400907 TTC5Q8N0Z6 440 aa9.69□□□□□ -0.86
RERE-203ENST00000400907 CHMP4BQ9H444 224 aaKnown RBP9.69□□□□□ -0.86
RERE-203ENST00000400907 SLC4A10Q6U841 1118 aa9.68□□□□□ -0.86
RERE-203ENST00000400907 GJD4Q96KN9 370 aaPredicted RBP9.68□□□□□ -0.86
RERE-203ENST00000400907 BCL9LQ86UU0 1499 aa9.68□□□□□ -0.86
RERE-203ENST00000400907 OVOS2A0A0G2JMS6 1433 aa9.68□□□□□ -0.86
RERE-203ENST00000400907 DYNC1I1O14576 645 aa9.68□□□□□ -0.86
RERE-203ENST00000400907 GPT2Q8TD30 523 aa9.68□□□□□ -0.86
RERE-203ENST00000400907 ABCA3Q99758 1704 aa9.67□□□□□ -0.86
RERE-203ENST00000400907 ZNF790Q6PG37 636 aa9.67□□□□□ -0.86
RERE-203ENST00000400907 MRPL50Q8N5N7 158 aaKnown RBP9.67□□□□□ -0.86
RERE-203ENST00000400907 MARCH10Q8NA82 808 aaPredicted RBP9.67□□□□□ -0.86
RERE-203ENST00000400907 FBXO41Q8TF61 875 aa9.67□□□□□ -0.86
RERE-203ENST00000400907 TSC1Q92574 1164 aa9.67□□□□□ -0.86
RERE-203ENST00000400907 TMOD3Q9NYL9 352 aa9.67□□□□□ -0.86
RERE-203ENST00000400907 TRPC5Q9UL62 973 aaPredicted RBP9.67□□□□□ -0.86
RERE-203ENST00000400907 LMO7Q8WWI1 1683 aa9.67□□□□□ -0.86
RERE-203ENST00000400907 SMARCA5O60264 1052 aaPredicted RBP9.67□□□□□ -0.86
RERE-203ENST00000400907 PRPF40AO75400 957 aaKnown RBP9.67□□□□□ -0.86
RERE-203ENST00000400907 NOL8Q76FK4 1167 aaKnown RBP9.67□□□□□ -0.86
RERE-203ENST00000400907 ZNF496Q96IT1 587 aaPredicted RBP9.67□□□□□ -0.86
RERE-203ENST00000400907 NSFL1CQ9UNZ2 370 aaKnown RBP9.67□□□□□ -0.86
RERE-203ENST00000400907 SLIT2O94813 1529 aa9.67□□□□□ -0.86
RERE-203ENST00000400907 CEMIPQ8WUJ3 1361 aa9.66□□□□□ -0.86
RERE-203ENST00000400907 EIF4A1P60842 406 aaKnown RBP9.66□□□□□ -0.86
RERE-203ENST00000400907 HDGFL1Q5TGJ6 251 aa9.66□□□□□ -0.86
RERE-203ENST00000400907 ASAP1Q9ULH1 1129 aa9.66□□□□□ -0.86
RERE-203ENST00000400907 ZNF330Q9Y3S2 320 aaPredicted RBP9.66□□□□□ -0.86
RERE-203ENST00000400907 KDM6AO15550 1401 aaPredicted RBP9.66□□□□□ -0.86
RERE-203ENST00000400907 NCAPD2Q15021 1401 aa9.66□□□□□ -0.86
RERE-203ENST00000400907 SEMA3EO15041 775 aa9.66□□□□□ -0.86
RERE-203ENST00000400907 KCNQ2O43526 872 aa9.66□□□□□ -0.86
RERE-203ENST00000400907 ARHGAP45Q92619 1136 aa9.66□□□□□ -0.86
RERE-203ENST00000400907 THRAP3Q9Y2W1 955 aaKnown RBP9.66□□□□□ -0.86
RERE-203ENST00000400907 CACNA1FO60840 1977 aa9.66□□□□□ -0.86
RERE-203ENST00000400907 SYCE3A1L190 88 aa9.66□□□□□ -0.86
RERE-203ENST00000400907 CYP2E1P05181 493 aaPredicted RBP9.66□□□□□ -0.86
RERE-203ENST00000400907 FOXD4L6Q3SYB3 417 aaPredicted RBP9.66□□□□□ -0.86
RERE-203ENST00000400907 TSHZ3Q63HK5 1081 aa9.66□□□□□ -0.86
RERE-203ENST00000400907 FOXD4L3Q6VB84 417 aaPredicted RBP9.66□□□□□ -0.86
RERE-203ENST00000400907 SEPT12Q8IYM1 358 aa9.66□□□□□ -0.86
RERE-203ENST00000400907 RNF214Q8ND24 703 aa9.66□□□□□ -0.86
RERE-203ENST00000400907 PIGBQ92521 554 aa9.66□□□□□ -0.86
RERE-203ENST00000400907 TMEM63CQ9P1W3 806 aa9.66□□□□□ -0.86
RERE-203ENST00000400907 COL22A1Q8NFW1 1626 aaPredicted RBP9.65□□□□□ -0.86
RERE-203ENST00000400907 COL14A1Q05707 1796 aaKnown RBP9.65□□□□□ -0.86
RERE-203ENST00000400907 SASS6Q6UVJ0 657 aa9.65□□□□□ -0.86
RERE-203ENST00000400907 MPNDQ8N594 471 aa9.65□□□□□ -0.86
RERE-203ENST00000400907 ZGPATQ8N5A5 531 aaKnown RBP9.65□□□□□ -0.86
RERE-203ENST00000400907 OTUD7AQ8TE49 926 aaPredicted RBP9.65□□□□□ -0.86
RERE-203ENST00000400907 STK31Q9BXU1 1019 aa9.65□□□□□ -0.86
RERE-203ENST00000400907 G2E3Q7L622 706 aa9.65□□□□□ -0.87
RERE-203ENST00000400907 CDCA7Q9BWT1 371 aaPredicted RBP9.65□□□□□ -0.87
RERE-203ENST00000400907 MYL6BP14649 208 aa9.64□□□□□ -0.87
RERE-203ENST00000400907 ZSCAN20P17040 1043 aaPredicted RBP9.64□□□□□ -0.87
RERE-203ENST00000400907 AIMP1Q12904 312 aaKnown RBP9.64□□□□□ -0.87
RERE-203ENST00000400907 BARGINQ6ZT62 677 aa9.64□□□□□ -0.87
RERE-203ENST00000400907 PTF1AQ7RTS3 328 aa9.64□□□□□ -0.87
RERE-203ENST00000400907 USP16Q9Y5T5 823 aa9.64□□□□□ -0.87
RERE-203ENST00000400907 KCNQ4P56696 695 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms