RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 TAF12Q16514 161 aa14.01□□□□□ -0.17
CACNA1C-213ENST00000399629 CACNA2D4Q7Z3S7 1137 aa14.01□□□□□ -0.17
CACNA1C-213ENST00000399629 ATP5J2-PTCD1G3V325 749 aa14.01□□□□□ -0.17
CACNA1C-213ENST00000399629 VPS36Q86VN1 386 aa14.01□□□□□ -0.17
CACNA1C-213ENST00000399629 CTNNA2P26232 953 aa14.01□□□□□ -0.17
CACNA1C-213ENST00000399629 EXOC6BQ9Y2D4 811 aa14.01□□□□□ -0.17
CACNA1C-213ENST00000399629 MAGI1Q96QZ7 1491 aaPredicted RBP14.01□□□□□ -0.17
CACNA1C-213ENST00000399629 SMTNL1A8MU46 457 aa14.01□□□□□ -0.17
CACNA1C-213ENST00000399629 NASPP49321 788 aaPredicted RBP14.01□□□□□ -0.17
CACNA1C-213ENST00000399629 CCDC91Q7Z6B0 441 aa14.01□□□□□ -0.17
CACNA1C-213ENST00000399629 CTNNBL1Q8WYA6 563 aaPredicted RBP14.01□□□□□ -0.17
CACNA1C-213ENST00000399629 SNRPA1P09661 255 aaKnown RBP14.01□□□□□ -0.17
CACNA1C-213ENST00000399629 TSPY3P0CV98 308 aa14□□□□□ -0.17
CACNA1C-213ENST00000399629 TSPY8P0CW00 308 aa14□□□□□ -0.17
CACNA1C-213ENST00000399629 TNNI2P48788 182 aa14□□□□□ -0.17
CACNA1C-213ENST00000399629 NIP7Q9Y221 180 aaKnown RBP eCLIP14□□□□□ -0.17
CACNA1C-213ENST00000399629 HMGN5P82970 282 aaKnown RBP14□□□□□ -0.17
CACNA1C-213ENST00000399629 THUMPD2Q9BTF0 503 aaKnown RBP14□□□□□ -0.17
CACNA1C-213ENST00000399629 TSPYL1Q9H0U9 437 aa14□□□□□ -0.17
CACNA1C-213ENST00000399629 FAM177A1Q8N128 213 aaPredicted RBP13.99□□□□□ -0.17
CACNA1C-213ENST00000399629 EYA3Q99504 573 aa13.99□□□□□ -0.17
CACNA1C-213ENST00000399629 FERMT1Q9BQL6 677 aa13.99□□□□□ -0.17
CACNA1C-213ENST00000399629 CDK13Q14004 1512 aaKnown RBP13.99□□□□□ -0.17
CACNA1C-213ENST00000399629 TTC21BQ7Z4L5 1316 aa13.99□□□□□ -0.17
CACNA1C-213ENST00000399629 RIMBP2O15034 1052 aa13.99□□□□□ -0.17
CACNA1C-213ENST00000399629 TRAF1Q13077 416 aa13.99□□□□□ -0.17
CACNA1C-213ENST00000399629 IQGAP2Q13576 1575 aa13.99□□□□□ -0.17
CACNA1C-213ENST00000399629 HMGB1P09429 215 aaKnown RBP13.99□□□□□ -0.17
CACNA1C-213ENST00000399629 CALRP27797 417 aaKnown RBP13.99□□□□□ -0.17
CACNA1C-213ENST00000399629 SPA17Q15506 151 aa13.99□□□□□ -0.17
CACNA1C-213ENST00000399629 RBM17Q96I25 401 aaKnown RBP13.99□□□□□ -0.17
CACNA1C-213ENST00000399629 KIAA0586Q9BVV6 1533 aa13.98□□□□□ -0.17
CACNA1C-213ENST00000399629 PRPF40BQ6NWY9 871 aaKnown RBP13.98□□□□□ -0.17
CACNA1C-213ENST00000399629 NCKAP5LQ9HCH0 1330 aa13.98□□□□□ -0.17
CACNA1C-213ENST00000399629 WDR7Q9Y4E6 1490 aa13.98□□□□□ -0.17
CACNA1C-213ENST00000399629 UQCRFS1P1P0C7P4 283 aa13.98□□□□□ -0.17
CACNA1C-213ENST00000399629 ZC3H12CQ9C0D7 883 aaKnown RBP13.98□□□□□ -0.17
CACNA1C-213ENST00000399629 LRRC59Q96AG4 307 aaKnown RBP13.98□□□□□ -0.17
CACNA1C-213ENST00000399629 LRRC45Q96CN5 670 aa13.98□□□□□ -0.17
CACNA1C-213ENST00000399629 HSP90AA2PQ14568 343 aaPredicted RBP13.98□□□□□ -0.17
CACNA1C-213ENST00000399629 MFSD6Q6ZSS7 791 aa13.98□□□□□ -0.17
CACNA1C-213ENST00000399629 UPF3BQ9BZI7 483 aaKnown RBP13.98□□□□□ -0.17
CACNA1C-213ENST00000399629 MX1P20591 662 aa13.97□□□□□ -0.17
CACNA1C-213ENST00000399629 USP8P40818 1118 aa13.97□□□□□ -0.17
CACNA1C-213ENST00000399629 CCDC174Q6PII3 467 aa13.97□□□□□ -0.17
CACNA1C-213ENST00000399629 EMILIN1Q9Y6C2 1016 aa13.97□□□□□ -0.17
CACNA1C-213ENST00000399629 MACROD2A1Z1Q3 448 aa13.97□□□□□ -0.17
CACNA1C-213ENST00000399629 AMPD3Q01432 767 aa13.97□□□□□ -0.17
CACNA1C-213ENST00000399629 TMEM67Q5HYA8 995 aa13.97□□□□□ -0.17
CACNA1C-213ENST00000399629 C8orf76Q96K31 380 aa13.97□□□□□ -0.17
CACNA1C-213ENST00000399629 HSPA2P54652 639 aa13.97□□□□□ -0.17
CACNA1C-213ENST00000399629 GOLIM4O00461 696 aa13.96□□□□□ -0.17
CACNA1C-213ENST00000399629 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.96□□□□□ -0.17
CACNA1C-213ENST00000399629 ZMYND15Q9H091 742 aa13.96□□□□□ -0.17
CACNA1C-213ENST00000399629 TCP11L1Q9NUJ3 509 aa13.96□□□□□ -0.17
CACNA1C-213ENST00000399629 CCDC178Q5BJE1 867 aa13.96□□□□□ -0.17
CACNA1C-213ENST00000399629 TPTE2Q6XPS3 522 aa13.96□□□□□ -0.17
CACNA1C-213ENST00000399629 HOOK3Q86VS8 718 aa13.96□□□□□ -0.17
CACNA1C-213ENST00000399629 PRC1O43663 620 aa13.96□□□□□ -0.17
CACNA1C-213ENST00000399629 GPR162Q16538 588 aa13.96□□□□□ -0.17
CACNA1C-213ENST00000399629 CCDC144CPQ8IYA2 1237 aa13.96□□□□□ -0.17
CACNA1C-213ENST00000399629 FANCAO15360 1455 aa13.96□□□□□ -0.17
CACNA1C-213ENST00000399629 SMARCA5O60264 1052 aaPredicted RBP13.96□□□□□ -0.17
CACNA1C-213ENST00000399629 TRAPPC3LQ5T215 181 aa13.96□□□□□ -0.17
CACNA1C-213ENST00000399629 KLHL10Q6JEL2 608 aa13.96□□□□□ -0.17
CACNA1C-213ENST00000399629 NOD1Q9Y239 953 aa13.96□□□□□ -0.17
CACNA1C-213ENST00000399629 K7ELQ4 463 aaPredicted RBP13.96□□□□□ -0.18
CACNA1C-213ENST00000399629 LMAN1P49257 510 aa13.96□□□□□ -0.18
CACNA1C-213ENST00000399629 FAM193AP78312 1265 aa13.96□□□□□ -0.18
CACNA1C-213ENST00000399629 SYNCQ9H7C4 482 aa13.96□□□□□ -0.18
CACNA1C-213ENST00000399629 EIF6P56537 245 aaKnown RBP13.95□□□□□ -0.18
CACNA1C-213ENST00000399629 ACEP12821 1306 aa13.95□□□□□ -0.18
CACNA1C-213ENST00000399629 TBCAO75347 108 aaKnown RBP13.95□□□□□ -0.18
CACNA1C-213ENST00000399629 STAMBPO95630 424 aa13.95□□□□□ -0.18
CACNA1C-213ENST00000399629 SIRT1Q96EB6 747 aa13.95□□□□□ -0.18
CACNA1C-213ENST00000399629 IL2RBP14784 551 aa13.95□□□□□ -0.18
CACNA1C-213ENST00000399629 NUP62CLQ9H1M0 184 aa13.95□□□□□ -0.18
CACNA1C-213ENST00000399629 TNNT1P13805 278 aa13.95□□□□□ -0.18
CACNA1C-213ENST00000399629 TCERG1LQ5VWI1 586 aa13.95□□□□□ -0.18
CACNA1C-213ENST00000399629 CCDC148Q8NFR7 591 aa13.95□□□□□ -0.18
CACNA1C-213ENST00000399629 TSHZ2Q9NRE2 1034 aa13.95□□□□□ -0.18
CACNA1C-213ENST00000399629 CYP7A1P22680 504 aa13.95□□□□□ -0.18
CACNA1C-213ENST00000399629 GIGYF2Q6Y7W6 1299 aaKnown RBP13.95□□□□□ -0.18
CACNA1C-213ENST00000399629 ERMNQ8TAM6 284 aa13.95□□□□□ -0.18
CACNA1C-213ENST00000399629 IDI1Q13907 227 aa13.94□□□□□ -0.18
CACNA1C-213ENST00000399629 TMEM57Q8N5G2 664 aa13.94□□□□□ -0.18
CACNA1C-213ENST00000399629 SNRKQ9NRH2 765 aa13.94□□□□□ -0.18
CACNA1C-213ENST00000399629 PODXL2Q9NZ53 605 aa13.94□□□□□ -0.18
CACNA1C-213ENST00000399629 F6X3S4 739 aa13.94□□□□□ -0.18
CACNA1C-213ENST00000399629 PHACTR2O75167 634 aa13.94□□□□□ -0.18
CACNA1C-213ENST00000399629 PICK1Q9NRD5 415 aa13.94□□□□□ -0.18
CACNA1C-213ENST00000399629 GUCY1B3Q02153 619 aa13.94□□□□□ -0.18
CACNA1C-213ENST00000399629 DZIP3Q86Y13 1208 aaKnown RBP13.94□□□□□ -0.18
CACNA1C-213ENST00000399629 SMARCC2Q8TAQ2 1214 aa13.94□□□□□ -0.18
CACNA1C-213ENST00000399629 PLCD4Q9BRC7 762 aa13.94□□□□□ -0.18
CACNA1C-213ENST00000399629 CCDC83Q8IWF9 413 aa13.94□□□□□ -0.18
CACNA1C-213ENST00000399629 TMOD4Q9NZQ9 345 aa13.94□□□□□ -0.18
CACNA1C-213ENST00000399629 STX8Q9UNK0 236 aa13.94□□□□□ -0.18
CACNA1C-213ENST00000399629 LAMC3Q9Y6N6 1575 aa13.94□□□□□ -0.18
CACNA1C-213ENST00000399629 GOLGA6L7A0A1B0GV03 622 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms