RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 MBD3O95983 291 aa27.92■■■□□ 2.06
RABGGTA-202ENST00000399409 CLCN1P35523 988 aa27.92■■■□□ 2.06
RABGGTA-202ENST00000399409 RGPD5Q99666 1765 aa27.91■■■□□ 2.06
RABGGTA-202ENST00000399409 IFIT2P09913 472 aaKnown RBP27.91■■■□□ 2.06
RABGGTA-202ENST00000399409 TRIM44Q96DX7 344 aaPredicted RBP27.91■■■□□ 2.06
RABGGTA-202ENST00000399409 DIAPH3Q9NSV4 1193 aa27.91■■■□□ 2.06
RABGGTA-202ENST00000399409 PRAMEF22A3QJZ6 481 aa27.9■■■□□ 2.06
RABGGTA-202ENST00000399409 CWF19L2Q2TBE0 894 aaKnown RBP27.9■■■□□ 2.06
RABGGTA-202ENST00000399409 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.9■■■□□ 2.061e-7■□□□□ 10.6
RABGGTA-202ENST00000399409 GPT2Q8TD30 523 aa27.9■■■□□ 2.06
RABGGTA-202ENST00000399409 PDIA6Q15084 440 aa27.89■■■□□ 2.06
RABGGTA-202ENST00000399409 PPP1R9BQ96SB3 815 aa27.89■■■□□ 2.06
RABGGTA-202ENST00000399409 SLC52A2Q9HAB3 445 aa27.89■■■□□ 2.06
RABGGTA-202ENST00000399409 SPG7Q9UQ90 795 aa27.89■■■□□ 2.06
RABGGTA-202ENST00000399409 ZNF790Q6PG37 636 aa27.89■■■□□ 2.05
RABGGTA-202ENST00000399409 LARP1Q6PKG0 1096 aaKnown RBP27.89■■■□□ 2.05
RABGGTA-202ENST00000399409 NOL8Q76FK4 1167 aaKnown RBP27.89■■■□□ 2.05
RABGGTA-202ENST00000399409 SCN11AQ9UI33 1791 aa27.89■■■□□ 2.05
RABGGTA-202ENST00000399409 TATP17735 454 aaPredicted RBP27.88■■■□□ 2.05
RABGGTA-202ENST00000399409 CWC27Q6UX04 472 aaKnown RBP27.88■■■□□ 2.05
RABGGTA-202ENST00000399409 EVI5LQ96CN4 794 aa27.88■■■□□ 2.05
RABGGTA-202ENST00000399409 SUCLG2Q96I99 432 aa27.88■■■□□ 2.05
RABGGTA-202ENST00000399409 TTC14Q96N46 770 aa27.88■■■□□ 2.05
RABGGTA-202ENST00000399409 NPHP3Q7Z494 1330 aa27.88■■■□□ 2.05
RABGGTA-202ENST00000399409 WDR33Q9C0J8 1336 aaKnown RBP27.88■■■□□ 2.05
RABGGTA-202ENST00000399409 ZC3H6P61129 1189 aaKnown RBP27.87■■■□□ 2.05
RABGGTA-202ENST00000399409 G3BP1Q13283 466 aaKnown RBP eCLIP27.87■■■□□ 2.05
RABGGTA-202ENST00000399409 PA2G4Q9UQ80 394 aaKnown RBP27.86■■■□□ 2.05
RABGGTA-202ENST00000399409 NEXNQ0ZGT2 675 aa27.85■■■□□ 2.05
RABGGTA-202ENST00000399409 NLRP2Q9NX02 1062 aa27.85■■■□□ 2.05
RABGGTA-202ENST00000399409 KDM6AO15550 1401 aaPredicted RBP27.85■■■□□ 2.05
RABGGTA-202ENST00000399409 ESPNB1AK53 854 aa27.85■■■□□ 2.05
RABGGTA-202ENST00000399409 HIP1O00291 1037 aa27.85■■■□□ 2.05
RABGGTA-202ENST00000399409 PHKG2P15735 406 aa27.85■■■□□ 2.05
RABGGTA-202ENST00000399409 RIC3Q7Z5B4 369 aa27.85■■■□□ 2.05
RABGGTA-202ENST00000399409 AACSQ86V21 672 aa27.85■■■□□ 2.05
RABGGTA-202ENST00000399409 KAZALD1Q96I82 304 aa27.84■■■□□ 2.05
RABGGTA-202ENST00000399409 BICC1Q9H694 974 aaKnown RBP27.84■■■□□ 2.05
RABGGTA-202ENST00000399409 AIMP1Q12904 312 aaKnown RBP27.84■■■□□ 2.05
RABGGTA-202ENST00000399409 FOXD4L5Q5VV16 416 aaPredicted RBP27.84■■■□□ 2.05
RABGGTA-202ENST00000399409 FOXD4L4Q8WXT5 416 aaPredicted RBP27.84■■■□□ 2.05
RABGGTA-202ENST00000399409 LIMCH1Q9UPQ0 1083 aa27.84■■■□□ 2.05
RABGGTA-202ENST00000399409 KCNB2Q92953 911 aa27.83■■■□□ 2.05
RABGGTA-202ENST00000399409 RASEFQ8IZ41 740 aa27.83■■■□□ 2.04
RABGGTA-202ENST00000399409 DCCP43146 1447 aa27.83■■■□□ 2.04
RABGGTA-202ENST00000399409 ATF3P18847 181 aa27.82■■■□□ 2.04
RABGGTA-202ENST00000399409 IFNL2Q8IZJ0 200 aa27.82■■■□□ 2.04
RABGGTA-202ENST00000399409 TM6SF1Q9BZW5 370 aa27.82■■■□□ 2.04
RABGGTA-202ENST00000399409 IGKV5-2P06315 115 aa27.81■■■□□ 2.04
RABGGTA-202ENST00000399409 C5P01031 1676 aa27.81■■■□□ 2.04
RABGGTA-202ENST00000399409 SASH1O94885 1247 aa27.81■■■□□ 2.04
RABGGTA-202ENST00000399409 AK2P54819 239 aa27.81■■■□□ 2.04
RABGGTA-202ENST00000399409 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.81■■■□□ 2.04
RABGGTA-202ENST00000399409 COL18A1P39060 1754 aa27.8■■■□□ 2.04
RABGGTA-202ENST00000399409 NEURL1BA8MQ27 555 aa27.8■■■□□ 2.04
RABGGTA-202ENST00000399409 SLC39A6Q13433 755 aa27.8■■■□□ 2.04
RABGGTA-202ENST00000399409 LRSAM1Q6UWE0 723 aa27.8■■■□□ 2.04
RABGGTA-202ENST00000399409 METTL22Q9BUU2 404 aaPredicted RBP27.8■■■□□ 2.04
RABGGTA-202ENST00000399409 RBM27Q9P2N5 1060 aaKnown RBP27.8■■■□□ 2.04
RABGGTA-202ENST00000399409 MRC1P22897 1456 aa27.8■■■□□ 2.04
RABGGTA-202ENST00000399409 TMEM63CQ9P1W3 806 aa27.79■■■□□ 2.04
RABGGTA-202ENST00000399409 NFATC2IPQ8NCF5 419 aa27.79■■■□□ 2.04
RABGGTA-202ENST00000399409 SYAP1Q96A49 352 aaPredicted RBP27.79■■■□□ 2.04
RABGGTA-202ENST00000399409 ANO8Q9HCE9 1232 aaPredicted RBP27.79■■■□□ 2.04
RABGGTA-202ENST00000399409 GCKRQ14397 625 aa27.78■■■□□ 2.04
RABGGTA-202ENST00000399409 XAGE3Q8WTP9 111 aa27.78■■■□□ 2.04
RABGGTA-202ENST00000399409 DCAF5Q96JK2 942 aa27.78■■■□□ 2.04
RABGGTA-202ENST00000399409 CHAMP1Q96JM3 812 aa27.78■■■□□ 2.04
RABGGTA-202ENST00000399409 MEGF6O75095 1541 aa27.78■■■□□ 2.04
RABGGTA-202ENST00000399409 VPS53Q5VIR6 699 aa27.78■■■□□ 2.04
RABGGTA-202ENST00000399409 RUFY3Q7L099 469 aa27.78■■■□□ 2.04
RABGGTA-202ENST00000399409 EAF2Q96CJ1 260 aaPredicted RBP27.78■■■□□ 2.04
RABGGTA-202ENST00000399409 SNRPA1P09661 255 aaKnown RBP27.77■■■□□ 2.04
RABGGTA-202ENST00000399409 CASTP20810 708 aaKnown RBP27.77■■■□□ 2.04
RABGGTA-202ENST00000399409 PRIM1P49642 420 aaKnown RBP27.77■■■□□ 2.04
RABGGTA-202ENST00000399409 ZSCAN31Q96LW9 406 aaPredicted RBP27.77■■■□□ 2.04
RABGGTA-202ENST00000399409 RBSNQ9H1K0 784 aa27.77■■■□□ 2.04
RABGGTA-202ENST00000399409 SNRKQ9NRH2 765 aa27.77■■■□□ 2.04
RABGGTA-202ENST00000399409 RPAP1Q9BWH6 1393 aaPredicted RBP27.77■■■□□ 2.04
RABGGTA-202ENST00000399409 PTH1RQ03431 593 aa27.76■■■□□ 2.04
RABGGTA-202ENST00000399409 CCDC171Q6TFL3 1326 aa27.76■■■□□ 2.03
RABGGTA-202ENST00000399409 MYL6BP14649 208 aa27.76■■■□□ 2.03
RABGGTA-202ENST00000399409 COPS6Q7L5N1 327 aa27.76■■■□□ 2.03
RABGGTA-202ENST00000399409 ZSWIM6Q9HCJ5 1215 aa27.76■■■□□ 2.03
RABGGTA-202ENST00000399409 CSB-PGBD3P0DP91 1061 aa27.75■■■□□ 2.03
RABGGTA-202ENST00000399409 TTC5Q8N0Z6 440 aa27.75■■■□□ 2.03
RABGGTA-202ENST00000399409 TMEM87AQ8NBN3 555 aa27.75■■■□□ 2.03
RABGGTA-202ENST00000399409 ZNF496Q96IT1 587 aaPredicted RBP27.75■■■□□ 2.03
RABGGTA-202ENST00000399409 NSFL1CQ9UNZ2 370 aaKnown RBP27.75■■■□□ 2.03
RABGGTA-202ENST00000399409 CYP46A1Q9Y6A2 500 aa27.75■■■□□ 2.03
RABGGTA-202ENST00000399409 ZKSCAN1P17029 563 aaPredicted RBP27.74■■■□□ 2.03
RABGGTA-202ENST00000399409 NECTIN1Q15223 517 aa27.74■■■□□ 2.03
RABGGTA-202ENST00000399409 PRPF40BQ6NWY9 871 aaKnown RBP27.74■■■□□ 2.03
RABGGTA-202ENST00000399409 MYD88Q99836 296 aa27.74■■■□□ 2.03
RABGGTA-202ENST00000399409 SH2B1Q9NRF2 756 aaPredicted RBP27.74■■■□□ 2.03
RABGGTA-202ENST00000399409 PDRG1Q9NUG6 133 aa27.74■■■□□ 2.03
RABGGTA-202ENST00000399409 COL15A1P39059 1388 aa27.74■■■□□ 2.03
RABGGTA-202ENST00000399409 ANKRD13DQ6ZTN6 518 aa27.74■■■□□ 2.03
RABGGTA-202ENST00000399409 SMC3Q9UQE7 1217 aa27.74■■■□□ 2.03
RABGGTA-202ENST00000399409 TMEM94Q12767 1356 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms