RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 PXDNLA1KZ92 1463 aa13.3□□□□□ -0.28
NIFKP1-201ENST00000398317 PER1O15534 1290 aaPredicted RBP13.3□□□□□ -0.28
NIFKP1-201ENST00000398317 CFAP44Q96MT7 982 aa13.3□□□□□ -0.28
NIFKP1-201ENST00000398317 GPBP1L1Q9HC44 474 aaPredicted RBP13.3□□□□□ -0.28
NIFKP1-201ENST00000398317 RYDENQ9NUL5 291 aaKnown RBP13.3□□□□□ -0.28
NIFKP1-201ENST00000398317 SRP68Q9UHB9 627 aaKnown RBP13.3□□□□□ -0.28
NIFKP1-201ENST00000398317 PARP3Q9Y6F1 533 aa13.3□□□□□ -0.28
NIFKP1-201ENST00000398317 ADCY9O60503 1353 aa13.3□□□□□ -0.28
NIFKP1-201ENST00000398317 SLC39A6Q13433 755 aa13.29□□□□□ -0.28
NIFKP1-201ENST00000398317 PAXIP1Q6ZW49 1069 aaPredicted RBP13.29□□□□□ -0.28
NIFKP1-201ENST00000398317 FAM163AQ96GL9 167 aaPredicted RBP13.29□□□□□ -0.28
NIFKP1-201ENST00000398317 CCDC87Q9NVE4 849 aa13.29□□□□□ -0.28
NIFKP1-201ENST00000398317 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.29□□□□□ -0.28
NIFKP1-201ENST00000398317 C10orf71Q711Q0 1435 aa13.29□□□□□ -0.28
NIFKP1-201ENST00000398317 RNMTO43148 476 aaKnown RBP13.28□□□□□ -0.28
NIFKP1-201ENST00000398317 DPEP1P16444 411 aa13.28□□□□□ -0.28
NIFKP1-201ENST00000398317 TGFB2P61812 414 aa13.28□□□□□ -0.28
NIFKP1-201ENST00000398317 INTS5Q6P9B9 1019 aaKnown RBP13.28□□□□□ -0.28
NIFKP1-201ENST00000398317 DNAJC10Q8IXB1 793 aa13.28□□□□□ -0.28
NIFKP1-201ENST00000398317 SLC52A2Q9HAB3 445 aa13.28□□□□□ -0.28
NIFKP1-201ENST00000398317 BCS1LQ9Y276 419 aa13.28□□□□□ -0.28
NIFKP1-201ENST00000398317 BRCA1P38398 1863 aaKnown RBP13.27□□□□□ -0.28
NIFKP1-201ENST00000398317 DIAPH1O60610 1272 aaKnown RBP13.27□□□□□ -0.29
NIFKP1-201ENST00000398317 MTHFSDQ2M296 383 aaKnown RBP13.27□□□□□ -0.29
NIFKP1-201ENST00000398317 USP42Q9H9J4 1324 aaKnown RBP13.26□□□□□ -0.29
NIFKP1-201ENST00000398317 ADAMTS7Q9UKP4 1686 aa13.25□□□□□ -0.29
NIFKP1-201ENST00000398317 C2orf72A6NCS6 295 aa13.25□□□□□ -0.29
NIFKP1-201ENST00000398317 FCHSD2O94868 740 aa13.25□□□□□ -0.29
NIFKP1-201ENST00000398317 DDR1Q08345 913 aa13.25□□□□□ -0.29
NIFKP1-201ENST00000398317 ARHGAP27Q6ZUM4 889 aa13.25□□□□□ -0.29
NIFKP1-201ENST00000398317 MRC1P22897 1456 aa13.24□□□□□ -0.29
NIFKP1-201ENST00000398317 CYP19A1P11511 503 aaPredicted RBP13.24□□□□□ -0.29
NIFKP1-201ENST00000398317 KCNA3P22001 575 aa13.24□□□□□ -0.29
NIFKP1-201ENST00000398317 USPL1Q5W0Q7 1092 aa13.24□□□□□ -0.29
NIFKP1-201ENST00000398317 SPRYD3Q8NCJ5 442 aa13.24□□□□□ -0.29
NIFKP1-201ENST00000398317 KCPQ6ZWJ8 1503 aa13.23□□□□□ -0.29
NIFKP1-201ENST00000398317 ARFGEF1Q9Y6D6 1849 aa13.23□□□□□ -0.29
NIFKP1-201ENST00000398317 SOS1Q07889 1333 aaPredicted RBP13.23□□□□□ -0.29
NIFKP1-201ENST00000398317 U2SURPO15042 1029 aaKnown RBP13.23□□□□□ -0.29
NIFKP1-201ENST00000398317 ZPR1O75312 459 aa13.23□□□□□ -0.29
NIFKP1-201ENST00000398317 LCE2DQ5TA82 110 aaPredicted RBP13.23□□□□□ -0.29
NIFKP1-201ENST00000398317 AFDNP55196 1824 aaKnown RBP13.23□□□□□ -0.29
NIFKP1-201ENST00000398317 POLRMTO00411 1230 aaKnown RBP13.22□□□□□ -0.29
NIFKP1-201ENST00000398317 TM4SF1P30408 202 aa13.22□□□□□ -0.29
NIFKP1-201ENST00000398317 CHRNA5P30532 468 aa13.22□□□□□ -0.29
NIFKP1-201ENST00000398317 ZBTB1Q9Y2K1 713 aa13.22□□□□□ -0.29
NIFKP1-201ENST00000398317 COL3A1P02461 1466 aaPredicted RBP13.22□□□□□ -0.29
NIFKP1-201ENST00000398317 KIF3CO14782 793 aa13.21□□□□□ -0.29
NIFKP1-201ENST00000398317 PIM2Q9P1W9 311 aa13.21□□□□□ -0.29
NIFKP1-201ENST00000398317 UBR2Q8IWV8 1755 aa13.21□□□□□ -0.29
NIFKP1-201ENST00000398317 DALRD3Q5D0E6 543 aaKnown RBP13.2□□□□□ -0.3
NIFKP1-201ENST00000398317 TMC2Q8TDI7 906 aa13.2□□□□□ -0.3
NIFKP1-201ENST00000398317 NARFQ9UHQ1 456 aa13.2□□□□□ -0.3
NIFKP1-201ENST00000398317 COL15A1P39059 1388 aa13.2□□□□□ -0.3
NIFKP1-201ENST00000398317 NPC1L1Q9UHC9 1359 aa13.2□□□□□ -0.3
NIFKP1-201ENST00000398317 HSPA6P17066 643 aa13.19□□□□□ -0.3
NIFKP1-201ENST00000398317 CANXP27824 592 aaKnown RBP13.19□□□□□ -0.3
NIFKP1-201ENST00000398317 NFIXQ14938 502 aa13.19□□□□□ -0.3
NIFKP1-201ENST00000398317 C9orf131Q5VYM1 1079 aa13.19□□□□□ -0.3
NIFKP1-201ENST00000398317 TTC5Q8N0Z6 440 aa13.19□□□□□ -0.3
NIFKP1-201ENST00000398317 VSIG10Q8N0Z9 540 aa13.19□□□□□ -0.3
NIFKP1-201ENST00000398317 IL17REQ8NFR9 667 aa13.19□□□□□ -0.3
NIFKP1-201ENST00000398317 BCL2L12Q9HB09 334 aa13.19□□□□□ -0.3
NIFKP1-201ENST00000398317 SBF1O95248 1867 aa13.19□□□□□ -0.3
NIFKP1-201ENST00000398317 SIPA1L3O60292 1781 aaPredicted RBP13.18□□□□□ -0.3
NIFKP1-201ENST00000398317 GNAT3A8MTJ3 354 aa13.18□□□□□ -0.3
NIFKP1-201ENST00000398317 ST18O60284 1047 aa13.18□□□□□ -0.3
NIFKP1-201ENST00000398317 HOXB3P14651 431 aaPredicted RBP13.18□□□□□ -0.3
NIFKP1-201ENST00000398317 TEFQ10587 303 aa13.17□□□□□ -0.3
NIFKP1-201ENST00000398317 GAS2L2Q8NHY3 880 aa13.17□□□□□ -0.3
NIFKP1-201ENST00000398317 ZNF496Q96IT1 587 aaPredicted RBP13.17□□□□□ -0.3
NIFKP1-201ENST00000398317 NMRK2Q9NPI5 230 aa13.17□□□□□ -0.3
NIFKP1-201ENST00000398317 NRXN2Q9P2S2 1712 aa13.16□□□□□ -0.3
NIFKP1-201ENST00000398317 STARD3NLO95772 234 aa13.16□□□□□ -0.3
NIFKP1-201ENST00000398317 SERPINB2P05120 415 aa13.16□□□□□ -0.3
NIFKP1-201ENST00000398317 ZNF790Q6PG37 636 aa13.16□□□□□ -0.3
NIFKP1-201ENST00000398317 BICDL1Q6ZP65 573 aa13.16□□□□□ -0.3
NIFKP1-201ENST00000398317 PHACTR3Q96KR7 559 aa13.16□□□□□ -0.3
NIFKP1-201ENST00000398317 CCDC88AQ3V6T2 1871 aa13.15□□□□□ -0.3
NIFKP1-201ENST00000398317 KCNQ3O43525 872 aa13.15□□□□□ -0.3
NIFKP1-201ENST00000398317 PRKAR2BP31323 418 aa13.15□□□□□ -0.3
NIFKP1-201ENST00000398317 EIF5P55010 431 aaKnown RBP13.15□□□□□ -0.3
NIFKP1-201ENST00000398317 RNF181Q9P0P0 153 aa13.15□□□□□ -0.3
NIFKP1-201ENST00000398317 ZNF330Q9Y3S2 320 aaPredicted RBP13.15□□□□□ -0.3
NIFKP1-201ENST00000398317 HEG1Q9ULI3 1381 aa13.15□□□□□ -0.3
NIFKP1-201ENST00000398317 SNPHO15079 494 aa13.14□□□□□ -0.31
NIFKP1-201ENST00000398317 CFAP53Q96M91 514 aa13.14□□□□□ -0.31
NIFKP1-201ENST00000398317 RSPH6AQ9H0K4 717 aa13.14□□□□□ -0.31
NIFKP1-201ENST00000398317 DLEC1Q9Y238 1755 aa13.13□□□□□ -0.31
NIFKP1-201ENST00000398317 CARMIL3Q8ND23 1372 aa13.13□□□□□ -0.31
NIFKP1-201ENST00000398317 A0A087WZG4 1122 aa13.13□□□□□ -0.31
NIFKP1-201ENST00000398317 TOMM70O94826 608 aa13.13□□□□□ -0.31
NIFKP1-201ENST00000398317 A1BGP04217 495 aa13.13□□□□□ -0.31
NIFKP1-201ENST00000398317 RASSF7Q02833 373 aa13.13□□□□□ -0.31
NIFKP1-201ENST00000398317 TBC1D9BQ66K14 1250 aa13.13□□□□□ -0.31
NIFKP1-201ENST00000398317 FMNL2Q96PY5 1086 aa13.13□□□□□ -0.31
NIFKP1-201ENST00000398317 TBC1D2BQ9UPU7 963 aa13.13□□□□□ -0.31
NIFKP1-201ENST00000398317 ANKRD31Q8N7Z5 1873 aa13.12□□□□□ -0.31
NIFKP1-201ENST00000398317 CEMIPQ8WUJ3 1361 aa13.12□□□□□ -0.31
NIFKP1-201ENST00000398317 BTBD11A6QL63 1104 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms