RNA–Protein interactions for RNA: ENST00000398146.3

RGPD2-201, Transcript of RANBP2-like and GRIP domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD2, Length 6,931 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD2-201ENST00000398146 UPF3BQ9BZI7 483 aaKnown RBP13.01□□□□□ -0.33
RGPD2-201ENST00000398146 ATP5J2-PTCD1G3V325 749 aa13□□□□□ -0.33
RGPD2-201ENST00000398146 CCDC8Q9H0W5 538 aaPredicted RBP13□□□□□ -0.33
RGPD2-201ENST00000398146 RNF34Q969K3 372 aa13□□□□□ -0.33
RGPD2-201ENST00000398146 JAG2Q9Y219 1238 aa13□□□□□ -0.33
RGPD2-201ENST00000398146 MRVI1Q9Y6F6 885 aa13□□□□□ -0.33
RGPD2-201ENST00000398146 PSMC4P43686 418 aa13□□□□□ -0.33
RGPD2-201ENST00000398146 KRT85P78386 507 aa13□□□□□ -0.33
RGPD2-201ENST00000398146 GSE1Q14687 1217 aa13□□□□□ -0.33
RGPD2-201ENST00000398146 SNRKQ9NRH2 765 aa13□□□□□ -0.33
RGPD2-201ENST00000398146 PDZRN4Q6ZMN7 1036 aaPredicted RBP13□□□□□ -0.33
RGPD2-201ENST00000398146 VPS8Q8N3P4 1428 aa13□□□□□ -0.33
RGPD2-201ENST00000398146 B4DLN1 442 aa13□□□□□ -0.33
RGPD2-201ENST00000398146 CNGA1P29973 690 aa13□□□□□ -0.33
RGPD2-201ENST00000398146 MRPL12P52815 198 aaKnown RBP13□□□□□ -0.33
RGPD2-201ENST00000398146 GABPAQ06546 454 aa13□□□□□ -0.33
RGPD2-201ENST00000398146 TCIRG1Q13488 830 aa12.99□□□□□ -0.33
RGPD2-201ENST00000398146 RNF187Q5TA31 235 aaPredicted RBP12.99□□□□□ -0.33
RGPD2-201ENST00000398146 CCDC192P0DO97 292 aa12.99□□□□□ -0.33
RGPD2-201ENST00000398146 SNX16P57768 344 aa12.99□□□□□ -0.33
RGPD2-201ENST00000398146 GSTO1P78417 241 aa12.99□□□□□ -0.33
RGPD2-201ENST00000398146 SMARCC2Q8TAQ2 1214 aa12.99□□□□□ -0.33
RGPD2-201ENST00000398146 PPFIA3O75145 1194 aa12.99□□□□□ -0.33
RGPD2-201ENST00000398146 IKBKGQ9Y6K9 419 aa12.99□□□□□ -0.33
RGPD2-201ENST00000398146 MTIF2P46199 727 aaKnown RBP12.99□□□□□ -0.33
RGPD2-201ENST00000398146 WAPLQ7Z5K2 1190 aa12.99□□□□□ -0.33
RGPD2-201ENST00000398146 CCDC7Q96M83 1385 aa12.99□□□□□ -0.33
RGPD2-201ENST00000398146 HARSP12081 509 aaKnown RBP12.99□□□□□ -0.33
RGPD2-201ENST00000398146 PICK1Q9NRD5 415 aa12.99□□□□□ -0.33
RGPD2-201ENST00000398146 U3KPZ7 1027 aaPredicted RBP12.99□□□□□ -0.33
RGPD2-201ENST00000398146 MYO15BQ96JP2 1530 aa12.99□□□□□ -0.33
RGPD2-201ENST00000398146 IVNS1ABPQ9Y6Y0 642 aa12.99□□□□□ -0.33
RGPD2-201ENST00000398146 TIGD1Q96MW7 591 aa12.98□□□□□ -0.33
RGPD2-201ENST00000398146 FGFR1OPO95684 399 aaKnown RBP12.98□□□□□ -0.33
RGPD2-201ENST00000398146 NUDT16Q96DE0 195 aaKnown RBP12.98□□□□□ -0.33
RGPD2-201ENST00000398146 NUP88Q99567 741 aaPredicted RBP12.98□□□□□ -0.33
RGPD2-201ENST00000398146 BACH1O14867 736 aa12.98□□□□□ -0.33
RGPD2-201ENST00000398146 LDHAL6AQ6ZMR3 332 aa12.98□□□□□ -0.33
RGPD2-201ENST00000398146 FILIP1Q7Z7B0 1213 aa12.98□□□□□ -0.33
RGPD2-201ENST00000398146 CEP83Q9Y592 693 aa12.98□□□□□ -0.33
RGPD2-201ENST00000398146 RIOK3O14730 519 aaKnown RBP12.98□□□□□ -0.33
RGPD2-201ENST00000398146 KIF22Q14807 665 aa12.98□□□□□ -0.33
RGPD2-201ENST00000398146 ADAMTS8Q9UP79 889 aa12.98□□□□□ -0.33
RGPD2-201ENST00000398146 TMEM110-MUSTN1A8MSY1 372 aa12.98□□□□□ -0.33
RGPD2-201ENST00000398146 ATP2C2O75185 946 aa12.97□□□□□ -0.33
RGPD2-201ENST00000398146 CCDC196A0A1B0GTZ2 297 aa12.97□□□□□ -0.33
RGPD2-201ENST00000398146 ERLIN1O75477 346 aa12.97□□□□□ -0.33
RGPD2-201ENST00000398146 FCHSD2O94868 740 aa12.97□□□□□ -0.33
RGPD2-201ENST00000398146 FAM43AQ8N2R8 423 aa12.97□□□□□ -0.33
RGPD2-201ENST00000398146 TMOD4Q9NZQ9 345 aa12.97□□□□□ -0.33
RGPD2-201ENST00000398146 GCOM1H8Y6P7 765 aaPredicted RBP12.97□□□□□ -0.33
RGPD2-201ENST00000398146 MYZAPP0CAP1 466 aa12.97□□□□□ -0.33
RGPD2-201ENST00000398146 CCDC63Q8NA47 563 aa12.97□□□□□ -0.33
RGPD2-201ENST00000398146 CCDC12Q8WUD4 166 aaPredicted RBP12.97□□□□□ -0.33
RGPD2-201ENST00000398146 PANK2Q9BZ23 570 aa12.97□□□□□ -0.33
RGPD2-201ENST00000398146 FSD2A1L4K1 749 aa12.97□□□□□ -0.33
RGPD2-201ENST00000398146 CCT2P78371 535 aaKnown RBP12.97□□□□□ -0.33
RGPD2-201ENST00000398146 LRPPRCP42704 1394 aaKnown RBP12.97□□□□□ -0.33
RGPD2-201ENST00000398146 CADPSQ9ULU8 1353 aa12.97□□□□□ -0.33
RGPD2-201ENST00000398146 KIF5BP33176 963 aa12.97□□□□□ -0.33
RGPD2-201ENST00000398146 RNF41Q9H4P4 317 aaPredicted RBP12.97□□□□□ -0.33
RGPD2-201ENST00000398146 SCAPERQ9BY12 1400 aa12.96□□□□□ -0.33
RGPD2-201ENST00000398146 RASA3Q14644 834 aa12.96□□□□□ -0.33
RGPD2-201ENST00000398146 TCP11L1Q9NUJ3 509 aa12.96□□□□□ -0.33
RGPD2-201ENST00000398146 FAM47CQ5HY64 1035 aa12.96□□□□□ -0.33
RGPD2-201ENST00000398146 PRPF31Q8WWY3 499 aaKnown RBP12.96□□□□□ -0.33
RGPD2-201ENST00000398146 ANO3Q9BYT9 981 aa12.96□□□□□ -0.33
RGPD2-201ENST00000398146 CRNKL1Q9BZJ0 848 aaKnown RBP12.96□□□□□ -0.33
RGPD2-201ENST00000398146 HAND2P61296 217 aa12.96□□□□□ -0.33
RGPD2-201ENST00000398146 CCDC152Q4G0S7 254 aa12.96□□□□□ -0.33
RGPD2-201ENST00000398146 HEATR3Q7Z4Q2 680 aa12.96□□□□□ -0.33
RGPD2-201ENST00000398146 EEF2P13639 858 aaKnown RBP12.96□□□□□ -0.34
RGPD2-201ENST00000398146 FYCO1Q9BQS8 1478 aa12.96□□□□□ -0.34
RGPD2-201ENST00000398146 ZC3H12CQ9C0D7 883 aaKnown RBP12.96□□□□□ -0.34
RGPD2-201ENST00000398146 EXOC6BQ9Y2D4 811 aa12.96□□□□□ -0.34
RGPD2-201ENST00000398146 EIF6P56537 245 aaKnown RBP12.96□□□□□ -0.34
RGPD2-201ENST00000398146 PRPF40BQ6NWY9 871 aaKnown RBP12.96□□□□□ -0.34
RGPD2-201ENST00000398146 IMPG2Q9BZV3 1241 aa12.96□□□□□ -0.34
RGPD2-201ENST00000398146 PHF8Q9UPP1 1060 aa12.96□□□□□ -0.34
RGPD2-201ENST00000398146 NOC2LQ9Y3T9 749 aaKnown RBP12.96□□□□□ -0.34
RGPD2-201ENST00000398146 CCDC88BA6NC98 1476 aa12.95□□□□□ -0.34
RGPD2-201ENST00000398146 KRT32Q14532 448 aa12.95□□□□□ -0.34
RGPD2-201ENST00000398146 BRDTQ58F21 947 aaPredicted RBP12.95□□□□□ -0.34
RGPD2-201ENST00000398146 FERMT3Q86UX7 667 aa12.95□□□□□ -0.34
RGPD2-201ENST00000398146 TNNI2P48788 182 aa12.95□□□□□ -0.34
RGPD2-201ENST00000398146 BMS1Q14692 1282 aaKnown RBP12.95□□□□□ -0.34
RGPD2-201ENST00000398146 PFDN4Q9NQP4 134 aa12.95□□□□□ -0.34
RGPD2-201ENST00000398146 ZNF804AQ7Z570 1209 aa12.95□□□□□ -0.34
RGPD2-201ENST00000398146 SMTNL1A8MU46 457 aa12.95□□□□□ -0.34
RGPD2-201ENST00000398146 ZYXQ15942 572 aaKnown RBP12.95□□□□□ -0.34
RGPD2-201ENST00000398146 DDB1Q16531 1140 aa12.95□□□□□ -0.34
RGPD2-201ENST00000398146 NAIPQ13075 1403 aa12.95□□□□□ -0.34
RGPD2-201ENST00000398146 MCM2P49736 904 aa12.95□□□□□ -0.34
RGPD2-201ENST00000398146 PAIP2Q9BPZ3 127 aaKnown RBP12.95□□□□□ -0.34
RGPD2-201ENST00000398146 PRKAG2Q9UGJ0 569 aa12.95□□□□□ -0.34
RGPD2-201ENST00000398146 PDZRN3Q9UPQ7 1066 aa12.95□□□□□ -0.34
RGPD2-201ENST00000398146 FANCD2Q9BXW9 1451 aa12.95□□□□□ -0.34
RGPD2-201ENST00000398146 ARID5AQ03989 594 aa12.95□□□□□ -0.34
RGPD2-201ENST00000398146 TMEM67Q5HYA8 995 aa12.95□□□□□ -0.34
RGPD2-201ENST00000398146 RTCBQ9Y3I0 505 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms