RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 C3P01024 1663 aa6.47□□□□□ -1.37
PTPRD-205ENST00000397611 FAM193AP78312 1265 aa6.47□□□□□ -1.37
PTPRD-205ENST00000397611 MTHFSDQ2M296 383 aaKnown RBP6.47□□□□□ -1.37
PTPRD-205ENST00000397611 CCDC183Q5T5S1 534 aa6.47□□□□□ -1.37
PTPRD-205ENST00000397611 GTF2F1P35269 517 aaKnown RBP eCLIP6.47□□□□□ -1.37
PTPRD-205ENST00000397611 CNTROBQ8N137 903 aa6.47□□□□□ -1.37
PTPRD-205ENST00000397611 GIGYF1O75420 1035 aaPredicted RBP6.46□□□□□ -1.37
PTPRD-205ENST00000397611 PLCD3Q8N3E9 789 aa6.46□□□□□ -1.37
PTPRD-205ENST00000397611 HEG1Q9ULI3 1381 aa6.46□□□□□ -1.37
PTPRD-205ENST00000397611 PSMA5P28066 241 aa6.46□□□□□ -1.37
PTPRD-205ENST00000397611 SF3A1Q15459 793 aaKnown RBP6.46□□□□□ -1.38
PTPRD-205ENST00000397611 VPS53Q5VIR6 699 aa6.46□□□□□ -1.38
PTPRD-205ENST00000397611 SMC3Q9UQE7 1217 aa6.46□□□□□ -1.38
PTPRD-205ENST00000397611 MON2Q7Z3U7 1717 aa6.46□□□□□ -1.38
PTPRD-205ENST00000397611 RRS1Q15050 365 aaKnown RBP6.46□□□□□ -1.38
PTPRD-205ENST00000397611 DNAAF4Q8WXU2 420 aa6.46□□□□□ -1.38
PTPRD-205ENST00000397611 PIBF1Q8WXW3 757 aa6.46□□□□□ -1.38
PTPRD-205ENST00000397611 C1orf115Q9H7X2 142 aa6.46□□□□□ -1.38
PTPRD-205ENST00000397611 TMEM63CQ9P1W3 806 aa6.46□□□□□ -1.38
PTPRD-205ENST00000397611 SKIDA1Q1XH10 827 aa6.46□□□□□ -1.38
PTPRD-205ENST00000397611 NGDNQ8NEJ9 315 aaKnown RBP6.46□□□□□ -1.38
PTPRD-205ENST00000397611 TTC14Q96N46 770 aa6.46□□□□□ -1.38
PTPRD-205ENST00000397611 NEMFO60524 1076 aa6.45□□□□□ -1.38
PTPRD-205ENST00000397611 DDX19AQ9NUU7 478 aaKnown RBP6.45□□□□□ -1.38
PTPRD-205ENST00000397611 NRXN3Q9Y4C0 1643 aa6.45□□□□□ -1.38
PTPRD-205ENST00000397611 SETD1AO15047 1707 aaKnown RBP6.45□□□□□ -1.38
PTPRD-205ENST00000397611 FAM83GA6ND36 823 aa6.45□□□□□ -1.38
PTPRD-205ENST00000397611 FIBPO43427 364 aa6.45□□□□□ -1.38
PTPRD-205ENST00000397611 DDX58O95786 925 aaKnown RBP6.45□□□□□ -1.38
PTPRD-205ENST00000397611 SYCP1Q15431 976 aa6.45□□□□□ -1.38
PTPRD-205ENST00000397611 LEKR1Q6ZMV7 388 aa6.45□□□□□ -1.38
PTPRD-205ENST00000397611 IP6K1Q92551 441 aa6.45□□□□□ -1.38
PTPRD-205ENST00000397611 NLRP6P59044 892 aa6.45□□□□□ -1.38
PTPRD-205ENST00000397611 ZSCAN22P10073 491 aaPredicted RBP6.45□□□□□ -1.38
PTPRD-205ENST00000397611 FOSBP53539 338 aa6.45□□□□□ -1.38
PTPRD-205ENST00000397611 FBXO3Q9UK99 471 aa6.45□□□□□ -1.38
PTPRD-205ENST00000397611 HSP90B2PQ58FF3 399 aa6.45□□□□□ -1.38
PTPRD-205ENST00000397611 SURF6O75683 361 aaKnown RBP6.45□□□□□ -1.38
PTPRD-205ENST00000397611 PRIM1P49642 420 aaKnown RBP6.45□□□□□ -1.38
PTPRD-205ENST00000397611 MCM10Q7L590 875 aa6.45□□□□□ -1.38
PTPRD-205ENST00000397611 FAM200AQ8TCP9 573 aa6.45□□□□□ -1.38
PTPRD-205ENST00000397611 SPTLC3Q9NUV7 552 aa6.45□□□□□ -1.38
PTPRD-205ENST00000397611 EXOC6BQ9Y2D4 811 aa6.45□□□□□ -1.38
PTPRD-205ENST00000397611 UTYO14607 1347 aa6.45□□□□□ -1.38
PTPRD-205ENST00000397611 KRT85P78386 507 aa6.44□□□□□ -1.38
PTPRD-205ENST00000397611 PLEKHO1Q53GL0 409 aaPredicted RBP6.44□□□□□ -1.38
PTPRD-205ENST00000397611 OTUD7AQ8TE49 926 aaPredicted RBP6.44□□□□□ -1.38
PTPRD-205ENST00000397611 EVI5LQ96CN4 794 aa6.44□□□□□ -1.38
PTPRD-205ENST00000397611 MST1RQ04912 1400 aa6.44□□□□□ -1.38
PTPRD-205ENST00000397611 IGSF3O75054 1194 aa6.44□□□□□ -1.38
PTPRD-205ENST00000397611 CCDC94Q9BW85 323 aaPredicted RBP6.44□□□□□ -1.38
PTPRD-205ENST00000397611 KIF2AO00139 706 aaPredicted RBP6.44□□□□□ -1.38
PTPRD-205ENST00000397611 STX6O43752 255 aa6.44□□□□□ -1.38
PTPRD-205ENST00000397611 TEFQ10587 303 aa6.44□□□□□ -1.38
PTPRD-205ENST00000397611 BEND3Q5T5X7 828 aa6.44□□□□□ -1.38
PTPRD-205ENST00000397611 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.44□□□□□ -1.38
PTPRD-205ENST00000397611 RBSNQ9H1K0 784 aa6.44□□□□□ -1.38
PTPRD-205ENST00000397611 AMOTL2Q9Y2J4 779 aa6.44□□□□□ -1.38
PTPRD-205ENST00000397611 KIF20BQ96Q89 1820 aa6.44□□□□□ -1.38
PTPRD-205ENST00000397611 SYT1P21579 422 aa6.44□□□□□ -1.38
PTPRD-205ENST00000397611 KSR2Q6VAB6 950 aa6.44□□□□□ -1.38
PTPRD-205ENST00000397611 CYP46A1Q9Y6A2 500 aa6.44□□□□□ -1.38
PTPRD-205ENST00000397611 H0YHG0 523 aa6.43□□□□□ -1.38
PTPRD-205ENST00000397611 AKAP4Q5JQC9 854 aa6.43□□□□□ -1.38
PTPRD-205ENST00000397611 RBM43Q6ZSC3 357 aaKnown RBP6.43□□□□□ -1.38
PTPRD-205ENST00000397611 IL17REQ8NFR9 667 aa6.43□□□□□ -1.38
PTPRD-205ENST00000397611 COPRSQ9NQ92 184 aa6.43□□□□□ -1.38
PTPRD-205ENST00000397611 DDX21Q9NR30 783 aaKnown RBP eCLIP6.43□□□□□ -1.38
PTPRD-205ENST00000397611 RPAP1Q9BWH6 1393 aaPredicted RBP6.43□□□□□ -1.38
PTPRD-205ENST00000397611 CCDC192P0DO97 292 aa6.43□□□□□ -1.38
PTPRD-205ENST00000397611 PPP1R42Q7Z4L9 355 aa6.43□□□□□ -1.38
PTPRD-205ENST00000397611 ZGPATQ8N5A5 531 aaKnown RBP6.43□□□□□ -1.38
PTPRD-205ENST00000397611 TMEM94Q12767 1356 aa6.43□□□□□ -1.38
PTPRD-205ENST00000397611 SMAP1Q8IYB5 467 aaPredicted RBP6.43□□□□□ -1.38
PTPRD-205ENST00000397611 MAP4K1Q92918 833 aa6.43□□□□□ -1.38
PTPRD-205ENST00000397611 AK7Q96M32 723 aa6.43□□□□□ -1.38
PTPRD-205ENST00000397611 HYPKQ9NX55 129 aa6.43□□□□□ -1.38
PTPRD-205ENST00000397611 RBM27Q9P2N5 1060 aaKnown RBP6.43□□□□□ -1.38
PTPRD-205ENST00000397611 F13A1P00488 732 aa6.43□□□□□ -1.38
PTPRD-205ENST00000397611 CALRP27797 417 aaKnown RBP6.43□□□□□ -1.38
PTPRD-205ENST00000397611 USPL1Q5W0Q7 1092 aa6.43□□□□□ -1.38
PTPRD-205ENST00000397611 PI4K2BQ8TCG2 481 aa6.43□□□□□ -1.38
PTPRD-205ENST00000397611 ZSWIM6Q9HCJ5 1215 aa6.43□□□□□ -1.38
PTPRD-205ENST00000397611 CTAGE5O15320 804 aa6.43□□□□□ -1.38
PTPRD-205ENST00000397611 SRGAP3O43295 1099 aa6.43□□□□□ -1.38
PTPRD-205ENST00000397611 EIF4A1P60842 406 aaKnown RBP6.43□□□□□ -1.38
PTPRD-205ENST00000397611 HOXC9P31274 260 aa6.43□□□□□ -1.38
PTPRD-205ENST00000397611 KCNJ6P48051 423 aa6.43□□□□□ -1.38
PTPRD-205ENST00000397611 GPR108Q9NPR9 543 aa6.43□□□□□ -1.38
PTPRD-205ENST00000397611 MED1Q15648 1581 aaPredicted RBP6.43□□□□□ -1.38
PTPRD-205ENST00000397611 RIMBP3CA6NJZ7 1639 aa6.43□□□□□ -1.38
PTPRD-205ENST00000397611 RIMBP3BA6NNM3 1639 aa6.43□□□□□ -1.38
PTPRD-205ENST00000397611 RIMBP3Q9UFD9 1639 aa6.43□□□□□ -1.38
PTPRD-205ENST00000397611 DCTN1Q14203 1278 aa6.43□□□□□ -1.38
PTPRD-205ENST00000397611 TMED8Q6PL24 325 aaPredicted RBP6.43□□□□□ -1.38
PTPRD-205ENST00000397611 GPT2Q8TD30 523 aa6.43□□□□□ -1.38
PTPRD-205ENST00000397611 HMGB1P09429 215 aaKnown RBP6.42□□□□□ -1.38
PTPRD-205ENST00000397611 LSG1Q9H089 658 aaKnown RBP6.42□□□□□ -1.38
PTPRD-205ENST00000397611 PHF8Q9UPP1 1060 aa6.42□□□□□ -1.38
PTPRD-205ENST00000397611 VGLL3A8MV65 326 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms