RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 PRDM2Q13029 1718 aa8.7□□□□□ -1.02
SMCO1-201ENST00000397537 PCGF5Q86SE9 256 aa8.69□□□□□ -1.02
SMCO1-201ENST00000397537 RDH13Q8NBN7 331 aa8.69□□□□□ -1.02
SMCO1-201ENST00000397537 CEP89Q96ST8 783 aa8.69□□□□□ -1.02
SMCO1-201ENST00000397537 TMX1Q9H3N1 280 aa8.69□□□□□ -1.02
SMCO1-201ENST00000397537 SNTG2Q9NY99 539 aa8.69□□□□□ -1.02
SMCO1-201ENST00000397537 TDRD9Q8NDG6 1382 aaKnown RBP8.69□□□□□ -1.02
SMCO1-201ENST00000397537 MAGI1Q96QZ7 1491 aaPredicted RBP8.68□□□□□ -1.02
SMCO1-201ENST00000397537 SFI1A8K8P3 1242 aa8.68□□□□□ -1.02
SMCO1-201ENST00000397537 IFRD1O00458 451 aaPredicted RBP8.68□□□□□ -1.02
SMCO1-201ENST00000397537 KIF3BO15066 747 aa8.68□□□□□ -1.02
SMCO1-201ENST00000397537 CD53P19397 219 aa8.68□□□□□ -1.02
SMCO1-201ENST00000397537 MASP1P48740 699 aa8.68□□□□□ -1.02
SMCO1-201ENST00000397537 ATP1A2P50993 1020 aa8.68□□□□□ -1.02
SMCO1-201ENST00000397537 NAA30Q147X3 362 aaPredicted RBP8.68□□□□□ -1.02
SMCO1-201ENST00000397537 ZNF280DQ6N043 979 aa8.68□□□□□ -1.02
SMCO1-201ENST00000397537 TRAF7Q6Q0C0 670 aa8.68□□□□□ -1.02
SMCO1-201ENST00000397537 SH3TC2Q8TF17 1288 aa8.68□□□□□ -1.02
SMCO1-201ENST00000397537 CDCA7LQ96GN5 454 aa8.68□□□□□ -1.02
SMCO1-201ENST00000397537 CRELD1Q96HD1 420 aa8.68□□□□□ -1.02
SMCO1-201ENST00000397537 ARPC5LQ9BPX5 153 aa8.68□□□□□ -1.02
SMCO1-201ENST00000397537 AVENQ9NQS1 362 aaPredicted RBP8.68□□□□□ -1.02
SMCO1-201ENST00000397537 CHIC2Q9UKJ5 165 aa8.68□□□□□ -1.02
SMCO1-201ENST00000397537 WIZO95785 1651 aa8.68□□□□□ -1.02
SMCO1-201ENST00000397537 FAM221BA6H8Z2 402 aa8.68□□□□□ -1.02
SMCO1-201ENST00000397537 GPR182O15218 404 aa8.68□□□□□ -1.02
SMCO1-201ENST00000397537 FAM13AO94988 1023 aa8.68□□□□□ -1.02
SMCO1-201ENST00000397537 USP5P45974 858 aa8.68□□□□□ -1.02
SMCO1-201ENST00000397537 CHMP4BP1P59074 171 aa8.68□□□□□ -1.02
SMCO1-201ENST00000397537 KIAA0907Q7Z7F0 614 aaPredicted RBP8.68□□□□□ -1.02
SMCO1-201ENST00000397537 TRIM50Q86XT4 487 aa8.68□□□□□ -1.02
SMCO1-201ENST00000397537 CDAN1Q8IWY9 1227 aa8.68□□□□□ -1.02
SMCO1-201ENST00000397537 ZNF408Q9H9D4 720 aa8.68□□□□□ -1.02
SMCO1-201ENST00000397537 NEUROD4Q9HD90 331 aa8.68□□□□□ -1.02
SMCO1-201ENST00000397537 NOD1Q9Y239 953 aa8.68□□□□□ -1.02
SMCO1-201ENST00000397537 DNMBPQ6XZF7 1577 aa8.68□□□□□ -1.02
SMCO1-201ENST00000397537 DIP2BQ9P265 1576 aa8.68□□□□□ -1.02
SMCO1-201ENST00000397537 C6orf229H3BNL8 230 aa8.67□□□□□ -1.02
SMCO1-201ENST00000397537 NR1I2O75469 434 aa8.67□□□□□ -1.02
SMCO1-201ENST00000397537 HCLS1P14317 486 aaPredicted RBP8.67□□□□□ -1.02
SMCO1-201ENST00000397537 GCGRP47871 477 aa8.67□□□□□ -1.02
SMCO1-201ENST00000397537 PTPN12Q05209 780 aaKnown RBP8.67□□□□□ -1.02
SMCO1-201ENST00000397537 PAK2Q13177 524 aa8.67□□□□□ -1.02
SMCO1-201ENST00000397537 RASA3Q14644 834 aa8.67□□□□□ -1.02
SMCO1-201ENST00000397537 TSGA10IPQ3SY00 556 aa8.67□□□□□ -1.02
SMCO1-201ENST00000397537 SPATA31D1Q6ZQQ2 1576 aa8.67□□□□□ -1.02
SMCO1-201ENST00000397537 TPCN2Q8NHX9 752 aa8.67□□□□□ -1.02
SMCO1-201ENST00000397537 SLC39A7Q92504 469 aa8.67□□□□□ -1.02
SMCO1-201ENST00000397537 CNTN3Q9P232 1028 aa8.67□□□□□ -1.02
SMCO1-201ENST00000397537 PLIN1O60240 522 aa8.66□□□□□ -1.02
SMCO1-201ENST00000397537 MPSTP25325 297 aa8.66□□□□□ -1.02
SMCO1-201ENST00000397537 WEE1P30291 646 aa8.66□□□□□ -1.02
SMCO1-201ENST00000397537 CDKN1CP49918 316 aaPredicted RBP8.66□□□□□ -1.02
SMCO1-201ENST00000397537 ARSHQ5FYA8 562 aa8.66□□□□□ -1.02
SMCO1-201ENST00000397537 SAMD3Q8N6K7 520 aa8.66□□□□□ -1.02
SMCO1-201ENST00000397537 NAP1L4Q99733 375 aaKnown RBP8.66□□□□□ -1.02
SMCO1-201ENST00000397537 TMEM134Q9H6X4 195 aa8.66□□□□□ -1.02
SMCO1-201ENST00000397537 SIRPGQ9P1W8 387 aa8.66□□□□□ -1.02
SMCO1-201ENST00000397537 MZF1P28698 734 aaPredicted RBP8.66□□□□□ -1.02
SMCO1-201ENST00000397537 GNA15P30679 374 aa8.66□□□□□ -1.02
SMCO1-201ENST00000397537 EXOSC10Q01780 885 aaKnown RBP8.66□□□□□ -1.02
SMCO1-201ENST00000397537 ATP2B2Q01814 1243 aa8.66□□□□□ -1.02
SMCO1-201ENST00000397537 VPS72Q15906 364 aa8.66□□□□□ -1.02
SMCO1-201ENST00000397537 RINLQ6ZS11 566 aa8.66□□□□□ -1.02
SMCO1-201ENST00000397537 SYMPKQ92797 1274 aaKnown RBP8.66□□□□□ -1.02
SMCO1-201ENST00000397537 DMRTB1Q96MA1 342 aa8.66□□□□□ -1.02
SMCO1-201ENST00000397537 ARNT2Q9HBZ2 717 aa8.66□□□□□ -1.02
SMCO1-201ENST00000397537 METRNQ9UJH8 293 aa8.66□□□□□ -1.02
SMCO1-201ENST00000397537 TSPOAP1O95153 1857 aa8.65□□□□□ -1.02
SMCO1-201ENST00000397537 ESYT3A0FGR9 886 aa8.65□□□□□ -1.02
SMCO1-201ENST00000397537 C3orf80F5H4A9 247 aa8.65□□□□□ -1.02
SMCO1-201ENST00000397537 ZBTB24O43167 697 aaPredicted RBP8.65□□□□□ -1.02
SMCO1-201ENST00000397537 EPB41L2O43491 1005 aaKnown RBP8.65□□□□□ -1.02
SMCO1-201ENST00000397537 PTCD1O75127 700 aaKnown RBP8.65□□□□□ -1.02
SMCO1-201ENST00000397537 CAND2O75155 1236 aa8.65□□□□□ -1.02
SMCO1-201ENST00000397537 NOS2P35228 1153 aa8.65□□□□□ -1.02
SMCO1-201ENST00000397537 POU5F1BQ06416 359 aa8.65□□□□□ -1.02
SMCO1-201ENST00000397537 NFE2Q16621 373 aaPredicted RBP8.65□□□□□ -1.02
SMCO1-201ENST00000397537 BRDTQ58F21 947 aaPredicted RBP8.65□□□□□ -1.02
SMCO1-201ENST00000397537 ERICH6BQ5W0A0 696 aa8.65□□□□□ -1.02
SMCO1-201ENST00000397537 JAMLQ86YT9 394 aa8.65□□□□□ -1.02
SMCO1-201ENST00000397537 GAS2L2Q8NHY3 880 aa8.65□□□□□ -1.02
SMCO1-201ENST00000397537 DEPDC7Q96QD5 511 aa8.65□□□□□ -1.02
SMCO1-201ENST00000397537 CITED4Q96RK1 184 aa8.65□□□□□ -1.02
SMCO1-201ENST00000397537 CASS4Q9NQ75 786 aa8.65□□□□□ -1.02
SMCO1-201ENST00000397537 CCDC87Q9NVE4 849 aa8.65□□□□□ -1.02
SMCO1-201ENST00000397537 POTEFA5A3E0 1075 aa8.64□□□□□ -1.03
SMCO1-201ENST00000397537 TSPAN6O43657 245 aa8.64□□□□□ -1.03
SMCO1-201ENST00000397537 DNAJB2P25686 324 aa8.64□□□□□ -1.03
SMCO1-201ENST00000397537 HDAC1Q13547 482 aaPredicted RBP8.64□□□□□ -1.03
SMCO1-201ENST00000397537 CCDC102BQ68D86 513 aa8.64□□□□□ -1.03
SMCO1-201ENST00000397537 APPBP2Q92624 585 aa8.64□□□□□ -1.03
SMCO1-201ENST00000397537 GPRASP2Q96D09 838 aa8.64□□□□□ -1.03
SMCO1-201ENST00000397537 INO80BQ9C086 356 aaPredicted RBP8.64□□□□□ -1.03
SMCO1-201ENST00000397537 POLA1P09884 1462 aaPredicted RBP8.64□□□□□ -1.03
SMCO1-201ENST00000397537 RAD54L2Q9Y4B4 1467 aa8.64□□□□□ -1.03
SMCO1-201ENST00000397537 MAP7D1Q3KQU3 841 aa8.64□□□□□ -1.03
SMCO1-201ENST00000397537 HS2ST1Q7LGA3 356 aa8.64□□□□□ -1.03
SMCO1-201ENST00000397537 FAM129BQ96TA1 746 aa8.64□□□□□ -1.03
SMCO1-201ENST00000397537 PAGR1Q9BTK6 254 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms