RNA–Protein interactions for RNA: ENST00000397468.5

RFPL3-202, Transcript of ret finger protein like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFPL3, Length 1,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-202ENST00000397468 IL17REQ8NFR9 667 aa12.92□□□□□ -0.34
RFPL3-202ENST00000397468 ZNF622Q969S3 477 aaKnown RBP eCLIP12.92□□□□□ -0.34
RFPL3-202ENST00000397468 CARMIL3Q8ND23 1372 aa12.92□□□□□ -0.34
RFPL3-202ENST00000397468 EIF5P55010 431 aaKnown RBP12.91□□□□□ -0.34
RFPL3-202ENST00000397468 RSPH6AQ9H0K4 717 aa12.91□□□□□ -0.34
RFPL3-202ENST00000397468 BCORQ6W2J9 1755 aa12.91□□□□□ -0.34
RFPL3-202ENST00000397468 GABBR2O75899 941 aa12.9□□□□□ -0.34
RFPL3-202ENST00000397468 PDE6BP35913 854 aa12.9□□□□□ -0.34
RFPL3-202ENST00000397468 IL6STP40189 918 aaPredicted RBP12.9□□□□□ -0.34
RFPL3-202ENST00000397468 ST5P78524 1137 aa12.9□□□□□ -0.34
RFPL3-202ENST00000397468 TBC1D9BQ66K14 1250 aa12.9□□□□□ -0.34
RFPL3-202ENST00000397468 CNBD1Q8NA66 436 aa12.9□□□□□ -0.34
RFPL3-202ENST00000397468 PHACTR3Q96KR7 559 aa12.9□□□□□ -0.34
RFPL3-202ENST00000397468 BCL2L12Q9HB09 334 aa12.9□□□□□ -0.34
RFPL3-202ENST00000397468 ANKRD31Q8N7Z5 1873 aa12.9□□□□□ -0.34
RFPL3-202ENST00000397468 WDR90Q96KV7 1748 aa12.89□□□□□ -0.35
RFPL3-202ENST00000397468 A1BGP04217 495 aa12.89□□□□□ -0.35
RFPL3-202ENST00000397468 PRR29P0C7W0 189 aa12.89□□□□□ -0.35
RFPL3-202ENST00000397468 LMNB1P20700 586 aa12.89□□□□□ -0.35
RFPL3-202ENST00000397468 PPP2R1AP30153 589 aa12.89□□□□□ -0.35
RFPL3-202ENST00000397468 MCM10Q7L590 875 aa12.89□□□□□ -0.35
RFPL3-202ENST00000397468 DZIP3Q86Y13 1208 aaKnown RBP12.89□□□□□ -0.35
RFPL3-202ENST00000397468 SETDB2Q96T68 719 aa12.89□□□□□ -0.35
RFPL3-202ENST00000397468 PDZRN3Q9UPQ7 1066 aa12.89□□□□□ -0.35
RFPL3-202ENST00000397468 CEMIPQ8WUJ3 1361 aa12.89□□□□□ -0.35
RFPL3-202ENST00000397468 COL11A2P13942 1736 aaPredicted RBP12.88□□□□□ -0.35
RFPL3-202ENST00000397468 CCDC24Q8N4L8 307 aa12.88□□□□□ -0.35
RFPL3-202ENST00000397468 RBM46Q8TBY0 533 aaKnown RBP12.88□□□□□ -0.35
RFPL3-202ENST00000397468 RRAGCQ9HB90 399 aa12.88□□□□□ -0.35
RFPL3-202ENST00000397468 ZNF652Q9Y2D9 606 aa12.88□□□□□ -0.35
RFPL3-202ENST00000397468 DLG5Q8TDM6 1919 aa12.88□□□□□ -0.35
RFPL3-202ENST00000397468 KCNQ3O43525 872 aa12.87□□□□□ -0.35
RFPL3-202ENST00000397468 PIP4K2AP48426 406 aaPredicted RBP12.87□□□□□ -0.35
RFPL3-202ENST00000397468 ZC3H4Q9UPT8 1303 aaKnown RBP12.87□□□□□ -0.35
RFPL3-202ENST00000397468 LAMB4A4D0S4 1761 aa12.86□□□□□ -0.35
RFPL3-202ENST00000397468 SNRPA1P09661 255 aaKnown RBP12.86□□□□□ -0.35
RFPL3-202ENST00000397468 DCTN1Q14203 1278 aa12.86□□□□□ -0.35
RFPL3-202ENST00000397468 PRR5LQ6MZQ0 368 aa12.86□□□□□ -0.35
RFPL3-202ENST00000397468 NBPF5PQ86XG9 351 aaPredicted RBP12.86□□□□□ -0.35
RFPL3-202ENST00000397468 BRIP1Q9BX63 1249 aa12.86□□□□□ -0.35
RFPL3-202ENST00000397468 DICER1Q9UPY3 1922 aaKnown RBP12.86□□□□□ -0.35
RFPL3-202ENST00000397468 MAPK8IP3Q9UPT6 1336 aa12.86□□□□□ -0.35
RFPL3-202ENST00000397468 SPDYE4A6NLX3 237 aa12.85□□□□□ -0.35
RFPL3-202ENST00000397468 C21orf2O43822 256 aa12.85□□□□□ -0.35
RFPL3-202ENST00000397468 ARFGEF2Q9Y6D5 1785 aa12.84□□□□□ -0.35
RFPL3-202ENST00000397468 PRAMEF22A3QJZ6 481 aa12.84□□□□□ -0.35
RFPL3-202ENST00000397468 FAM177BA6PVY3 158 aa12.84□□□□□ -0.35
RFPL3-202ENST00000397468 CAMTA2O94983 1202 aa12.84□□□□□ -0.35
RFPL3-202ENST00000397468 GTF2E1P29083 439 aaPredicted RBP12.84□□□□□ -0.35
RFPL3-202ENST00000397468 FSTL1Q12841 308 aa12.84□□□□□ -0.35
RFPL3-202ENST00000397468 DPY19L2Q6NUT2 758 aa12.84□□□□□ -0.35
RFPL3-202ENST00000397468 SMC1BQ8NDV3 1235 aa12.84□□□□□ -0.35
RFPL3-202ENST00000397468 CNKSR1Q969H4 720 aa12.84□□□□□ -0.35
RFPL3-202ENST00000397468 USP16Q9Y5T5 823 aa12.84□□□□□ -0.35
RFPL3-202ENST00000397468 FER1L6Q2WGJ9 1857 aa12.84□□□□□ -0.35
RFPL3-202ENST00000397468 GLTPD2A6NH11 291 aa12.83□□□□□ -0.36
RFPL3-202ENST00000397468 HTATSF1O43719 755 aaKnown RBP12.83□□□□□ -0.36
RFPL3-202ENST00000397468 ERFEQ4G0M1 354 aa12.83□□□□□ -0.36
RFPL3-202ENST00000397468 CHADLQ6NUI6 762 aa12.83□□□□□ -0.36
RFPL3-202ENST00000397468 TAOK3Q9H2K8 898 aa12.83□□□□□ -0.36
RFPL3-202ENST00000397468 SLX4Q8IY92 1834 aa12.83□□□□□ -0.36
RFPL3-202ENST00000397468 VEGFAP15692 232 aaPredicted RBP12.82□□□□□ -0.36
RFPL3-202ENST00000397468 TAF7Q15545 349 aaPredicted RBP12.82□□□□□ -0.36
RFPL3-202ENST00000397468 SOGA3Q5TF21 947 aa12.82□□□□□ -0.36
RFPL3-202ENST00000397468 LHX8Q68G74 356 aa12.82□□□□□ -0.36
RFPL3-202ENST00000397468 NGEFQ8N5V2 710 aa12.82□□□□□ -0.36
RFPL3-202ENST00000397468 PNISRQ8TF01 805 aaKnown RBP12.82□□□□□ -0.36
RFPL3-202ENST00000397468 MASTLQ96GX5 879 aa12.82□□□□□ -0.36
RFPL3-202ENST00000397468 PNNQ9H307 717 aaKnown RBP12.82□□□□□ -0.36
RFPL3-202ENST00000397468 NIP7Q9Y221 180 aaKnown RBP eCLIP12.82□□□□□ -0.36
RFPL3-202ENST00000397468 NFKBIEO00221 500 aa12.81□□□□□ -0.36
RFPL3-202ENST00000397468 IFFO2Q5TF58 517 aa12.81□□□□□ -0.36
RFPL3-202ENST00000397468 STYK1Q6J9G0 422 aa12.81□□□□□ -0.36
RFPL3-202ENST00000397468 PRPF40BQ6NWY9 871 aaKnown RBP12.81□□□□□ -0.36
RFPL3-202ENST00000397468 CLEC4GQ6UXB4 293 aa12.81□□□□□ -0.36
RFPL3-202ENST00000397468 TPTE2Q6XPS3 522 aa12.81□□□□□ -0.36
RFPL3-202ENST00000397468 MIS18AQ9NYP9 233 aa12.81□□□□□ -0.36
RFPL3-202ENST00000397468 KDM3BQ7LBC6 1761 aa12.81□□□□□ -0.36
RFPL3-202ENST00000397468 HTRA3P83110 453 aa12.8□□□□□ -0.36
RFPL3-202ENST00000397468 KIF6Q6ZMV9 814 aa12.8□□□□□ -0.36
RFPL3-202ENST00000397468 NUP98P52948 1817 aa12.8□□□□□ -0.36
RFPL3-202ENST00000397468 SRGNP10124 158 aa12.79□□□□□ -0.36
RFPL3-202ENST00000397468 CCDC93Q567U6 631 aa12.79□□□□□ -0.36
RFPL3-202ENST00000397468 NPR1P16066 1061 aa12.78□□□□□ -0.36
RFPL3-202ENST00000397468 KLRG1Q96E93 195 aa12.78□□□□□ -0.36
RFPL3-202ENST00000397468 RRP7AQ9Y3A4 280 aaKnown RBP12.78□□□□□ -0.36
RFPL3-202ENST00000397468 NBPF26B4DH59 902 aa12.77□□□□□ -0.37
RFPL3-202ENST00000397468 MYL6BP14649 208 aa12.77□□□□□ -0.37
RFPL3-202ENST00000397468 PRELPP51888 382 aa12.77□□□□□ -0.37
RFPL3-202ENST00000397468 NFE2L2Q16236 605 aa12.77□□□□□ -0.37
RFPL3-202ENST00000397468 NBPF10Q6P3W6 841 aaKnown RBP12.77□□□□□ -0.37
RFPL3-202ENST00000397468 NBPF15Q8N660 670 aa12.77□□□□□ -0.37
RFPL3-202ENST00000397468 NYXQ9GZU5 481 aa12.77□□□□□ -0.37
RFPL3-202ENST00000397468 THUMPD2Q9BTF0 503 aaKnown RBP12.76□□□□□ -0.37
RFPL3-202ENST00000397468 LTBP3Q9NS15 1303 aa12.76□□□□□ -0.37
RFPL3-202ENST00000397468 IQCA1LA6NCM1 817 aa12.75□□□□□ -0.37
RFPL3-202ENST00000397468 ALDH1B1P30837 517 aa12.75□□□□□ -0.37
RFPL3-202ENST00000397468 HLFQ16534 295 aa12.75□□□□□ -0.37
RFPL3-202ENST00000397468 DNAJC5GQ8N7S2 189 aa12.75□□□□□ -0.37
RFPL3-202ENST00000397468 RPGRQ92834 1020 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms