RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 XAGE3Q8WTP9 111 aa28.83■■■□□ 2.21
PABPN1-202ENST00000397276 TRIM44Q96DX7 344 aaPredicted RBP28.83■■■□□ 2.21
PABPN1-202ENST00000397276 SIL1Q9H173 461 aa28.83■■■□□ 2.21
PABPN1-202ENST00000397276 USP16Q9Y5T5 823 aa28.83■■■□□ 2.21
PABPN1-202ENST00000397276 MEGF6O75095 1541 aa28.82■■■□□ 2.2
PABPN1-202ENST00000397276 CYP2E1P05181 493 aaPredicted RBP28.82■■■□□ 2.2
PABPN1-202ENST00000397276 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.82■■■□□ 2.2
PABPN1-202ENST00000397276 IGKV5-2P06315 115 aa28.82■■■□□ 2.2
PABPN1-202ENST00000397276 ZDHHC9Q9Y397 364 aa28.81■■■□□ 2.2
PABPN1-202ENST00000397276 TUBGCP6Q96RT7 1819 aa28.81■■■□□ 2.2
PABPN1-202ENST00000397276 CYP27B1O15528 508 aa28.81■■■□□ 2.2
PABPN1-202ENST00000397276 IFIT2P09913 472 aaKnown RBP28.81■■■□□ 2.2
PABPN1-202ENST00000397276 NCLP19338 710 aaKnown RBP28.81■■■□□ 2.2
PABPN1-202ENST00000397276 KLHDC4Q8TBB5 520 aa28.81■■■□□ 2.2
PABPN1-202ENST00000397276 SGSM2O43147 1006 aa28.8■■■□□ 2.2
PABPN1-202ENST00000397276 ANAPC15P60006 121 aa28.8■■■□□ 2.2
PABPN1-202ENST00000397276 CLEC17AQ6ZS10 378 aa28.8■■■□□ 2.2
PABPN1-202ENST00000397276 KIF1AQ12756 1690 aa28.8■■■□□ 2.2
PABPN1-202ENST00000397276 CADPS2Q86UW7 1296 aa28.79■■■□□ 2.2
PABPN1-202ENST00000397276 AACSQ86V21 672 aa28.79■■■□□ 2.2
PABPN1-202ENST00000397276 TTC5Q8N0Z6 440 aa28.79■■■□□ 2.2
PABPN1-202ENST00000397276 MYD88Q99836 296 aa28.79■■■□□ 2.2
PABPN1-202ENST00000397276 GLRX3O76003 335 aaKnown RBP28.79■■■□□ 2.2
PABPN1-202ENST00000397276 PTMSP20962 102 aa28.79■■■□□ 2.2
PABPN1-202ENST00000397276 VSIG10Q8N0Z9 540 aa28.78■■■□□ 2.2
PABPN1-202ENST00000397276 CCDC8Q9H0W5 538 aaPredicted RBP28.78■■■□□ 2.2
PABPN1-202ENST00000397276 HSPA4P34932 840 aa28.77■■■□□ 2.2
PABPN1-202ENST00000397276 ALS2Q96Q42 1657 aa28.77■■■□□ 2.2
PABPN1-202ENST00000397276 NEXNQ0ZGT2 675 aa28.77■■■□□ 2.2
PABPN1-202ENST00000397276 LARP1Q6PKG0 1096 aaKnown RBP28.77■■■□□ 2.2
PABPN1-202ENST00000397276 ECHDC1Q9NTX5 307 aa28.77■■■□□ 2.2
PABPN1-202ENST00000397276 G3BP1Q13283 466 aaKnown RBP eCLIP28.76■■■□□ 2.198e-7■□□□□ 8.4
PABPN1-202ENST00000397276 LARP6Q9BRS8 491 aaKnown RBP28.76■■■□□ 2.19
PABPN1-202ENST00000397276 CAMTA1Q9Y6Y1 1673 aa28.76■■■□□ 2.19
PABPN1-202ENST00000397276 SASH1O94885 1247 aa28.76■■■□□ 2.19
PABPN1-202ENST00000397276 MCM2P49736 904 aa28.76■■■□□ 2.19
PABPN1-202ENST00000397276 HDAC5Q9UQL6 1122 aa28.76■■■□□ 2.19
PABPN1-202ENST00000397276 TTC41PQ6P2S7 1318 aa28.76■■■□□ 2.19
PABPN1-202ENST00000397276 KIAA1211Q6ZU35 1233 aa28.75■■■□□ 2.19
PABPN1-202ENST00000397276 PRPF40AO75400 957 aaKnown RBP28.75■■■□□ 2.19
PABPN1-202ENST00000397276 DIAPH3Q9NSV4 1193 aa28.75■■■□□ 2.19
PABPN1-202ENST00000397276 NEURL1BA8MQ27 555 aa28.74■■■□□ 2.19
PABPN1-202ENST00000397276 DCAF5Q96JK2 942 aa28.74■■■□□ 2.19
PABPN1-202ENST00000397276 ISY1Q9ULR0 285 aaKnown RBP28.74■■■□□ 2.19
PABPN1-202ENST00000397276 LSG1Q9H089 658 aaKnown RBP28.74■■■□□ 2.19
PABPN1-202ENST00000397276 CABP4P57796 275 aa28.73■■■□□ 2.19
PABPN1-202ENST00000397276 ERC1Q8IUD2 1116 aa28.73■■■□□ 2.19
PABPN1-202ENST00000397276 RASEFQ8IZ41 740 aa28.73■■■□□ 2.19
PABPN1-202ENST00000397276 EAF2Q96CJ1 260 aaPredicted RBP28.73■■■□□ 2.19
PABPN1-202ENST00000397276 EPHA10Q5JZY3 1008 aa28.73■■■□□ 2.19
PABPN1-202ENST00000397276 ANKRD13DQ6ZTN6 518 aa28.73■■■□□ 2.19
PABPN1-202ENST00000397276 LMBRD1Q9NUN5 540 aa28.73■■■□□ 2.19
PABPN1-202ENST00000397276 RAD50Q92878 1312 aa28.73■■■□□ 2.19
PABPN1-202ENST00000397276 SNRPA1P09661 255 aaKnown RBP28.73■■■□□ 2.19
PABPN1-202ENST00000397276 KLHL40Q2TBA0 621 aa28.73■■■□□ 2.19
PABPN1-202ENST00000397276 GCKRQ14397 625 aa28.72■■■□□ 2.19
PABPN1-202ENST00000397276 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.72■■■□□ 2.192e-15■■□□□ 12.5
PABPN1-202ENST00000397276 TLR7Q9NYK1 1049 aaKnown RBP28.72■■■□□ 2.19
PABPN1-202ENST00000397276 SNX14Q9Y5W7 946 aa28.72■■■□□ 2.19
PABPN1-202ENST00000397276 GPATCH3Q96I76 525 aa28.72■■■□□ 2.19
PABPN1-202ENST00000397276 SPATA31A3Q5VYP0 1347 aa28.72■■■□□ 2.19
PABPN1-202ENST00000397276 SIPA1L3O60292 1781 aaPredicted RBP28.71■■■□□ 2.19
PABPN1-202ENST00000397276 FOXD4L6Q3SYB3 417 aaPredicted RBP28.71■■■□□ 2.19
PABPN1-202ENST00000397276 FOXD4L3Q6VB84 417 aaPredicted RBP28.71■■■□□ 2.19
PABPN1-202ENST00000397276 USP42Q9H9J4 1324 aaKnown RBP28.71■■■□□ 2.19
PABPN1-202ENST00000397276 TNS3Q68CZ2 1445 aa28.71■■■□□ 2.19
PABPN1-202ENST00000397276 ATP5J2-PTCD1G3V325 749 aa28.71■■■□□ 2.19
PABPN1-202ENST00000397276 RRP9O43818 475 aaKnown RBP28.71■■■□□ 2.19
PABPN1-202ENST00000397276 PTCD1O75127 700 aaKnown RBP28.71■■■□□ 2.19
PABPN1-202ENST00000397276 METTL22Q9BUU2 404 aaPredicted RBP28.71■■■□□ 2.19
PABPN1-202ENST00000397276 UTYO14607 1347 aa28.71■■■□□ 2.19
PABPN1-202ENST00000397276 CPA1P15085 419 aa28.7■■■□□ 2.19
PABPN1-202ENST00000397276 CUL4AQ13619 759 aa28.7■■■□□ 2.19
PABPN1-202ENST00000397276 CAVIN1Q6NZI2 390 aaKnown RBP28.7■■■□□ 2.19
PABPN1-202ENST00000397276 STRCP1A6NGW2 1772 aa28.7■■■□□ 2.18
PABPN1-202ENST00000397276 FMNL2Q96PY5 1086 aa28.7■■■□□ 2.18
PABPN1-202ENST00000397276 PTH1RQ03431 593 aa28.69■■■□□ 2.18
PABPN1-202ENST00000397276 GLIPR1L2Q4G1C9 344 aa28.68■■■□□ 2.18
PABPN1-202ENST00000397276 BOLA2Q9H3K6 86 aa28.68■■■□□ 2.18
PABPN1-202ENST00000397276 NASPP49321 788 aaPredicted RBP28.67■■■□□ 2.18
PABPN1-202ENST00000397276 DDX54Q8TDD1 881 aaKnown RBP28.67■■■□□ 2.18
PABPN1-202ENST00000397276 ZMYND15Q9H091 742 aa28.67■■■□□ 2.18
PABPN1-202ENST00000397276 TOM1L2Q6ZVM7 507 aa28.66■■■□□ 2.18
PABPN1-202ENST00000397276 UBE3BQ7Z3V4 1068 aa28.66■■■□□ 2.18
PABPN1-202ENST00000397276 LRP10Q7Z4F1 713 aa28.66■■■□□ 2.18
PABPN1-202ENST00000397276 PRDM11Q9NQV5 511 aa28.66■■■□□ 2.18
PABPN1-202ENST00000397276 BRINP3Q76B58 766 aa28.66■■■□□ 2.18
PABPN1-202ENST00000397276 C5P01031 1676 aa28.65■■■□□ 2.18
PABPN1-202ENST00000397276 DTNBO60941 627 aa28.65■■■□□ 2.18
PABPN1-202ENST00000397276 ADAMTS7Q9UKP4 1686 aa28.65■■■□□ 2.18
PABPN1-202ENST00000397276 RUFY2Q8WXA3 655 aa28.65■■■□□ 2.18
PABPN1-202ENST00000397276 FAM227BQ96M60 508 aa28.65■■■□□ 2.18
PABPN1-202ENST00000397276 PRPF40BQ6NWY9 871 aaKnown RBP28.64■■■□□ 2.18
PABPN1-202ENST00000397276 EVI5LQ96CN4 794 aa28.64■■■□□ 2.18
PABPN1-202ENST00000397276 RBM27Q9P2N5 1060 aaKnown RBP28.64■■■□□ 2.18
PABPN1-202ENST00000397276 DCCP43146 1447 aa28.64■■■□□ 2.17
PABPN1-202ENST00000397276 SCN11AQ9UI33 1791 aa28.63■■■□□ 2.17
PABPN1-202ENST00000397276 EPB41L2O43491 1005 aaKnown RBP28.63■■■□□ 2.17
PABPN1-202ENST00000397276 CASTP20810 708 aaKnown RBP28.63■■■□□ 2.17
PABPN1-202ENST00000397276 AK2P54819 239 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms