RNA–Protein interactions for RNA: ENST00000397081.7

RAPGEF4-201, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-201ENST00000397081 USP44Q9H0E7 712 aa17.5■□□□□ 0.39
RAPGEF4-201ENST00000397081 TRMT1Q9NXH9 659 aaKnown RBP17.5■□□□□ 0.39
RAPGEF4-201ENST00000397081 PNPLA6Q8IY17 1366 aa17.5■□□□□ 0.39
RAPGEF4-201ENST00000397081 TMEM131LA2VDJ0 1609 aa17.5■□□□□ 0.39
RAPGEF4-201ENST00000397081 BLOC1S2Q6QNY1 142 aa17.5■□□□□ 0.39
RAPGEF4-201ENST00000397081 MYL6BP14649 208 aa17.5■□□□□ 0.39
RAPGEF4-201ENST00000397081 ADCK5Q3MIX3 580 aa17.5■□□□□ 0.39
RAPGEF4-201ENST00000397081 ESCO1Q5FWF5 840 aa17.5■□□□□ 0.39
RAPGEF4-201ENST00000397081 PIK3R4Q99570 1358 aa17.49■□□□□ 0.39
RAPGEF4-201ENST00000397081 ROBO2Q9HCK4 1378 aa17.49■□□□□ 0.39
RAPGEF4-201ENST00000397081 RUFY3Q7L099 469 aa17.49■□□□□ 0.39
RAPGEF4-201ENST00000397081 PYCARDQ9ULZ3 195 aa17.49■□□□□ 0.39
RAPGEF4-201ENST00000397081 NDUFB9Q9Y6M9 179 aa17.49■□□□□ 0.39
RAPGEF4-201ENST00000397081 U2AF2P26368 475 aaKnown RBP eCLIP17.49■□□□□ 0.39
RAPGEF4-201ENST00000397081 PIBF1Q8WXW3 757 aa17.49■□□□□ 0.39
RAPGEF4-201ENST00000397081 VIRMAQ69YN4 1812 aaKnown RBP17.49■□□□□ 0.39
RAPGEF4-201ENST00000397081 GLRX3O76003 335 aaKnown RBP17.48■□□□□ 0.39
RAPGEF4-201ENST00000397081 PTH1RQ03431 593 aa17.48■□□□□ 0.39
RAPGEF4-201ENST00000397081 LRMPQ12912 555 aa17.48■□□□□ 0.39
RAPGEF4-201ENST00000397081 CWF19L2Q2TBE0 894 aaKnown RBP17.48■□□□□ 0.39
RAPGEF4-201ENST00000397081 RIOK3O14730 519 aaKnown RBP17.48■□□□□ 0.39
RAPGEF4-201ENST00000397081 ANO6Q4KMQ2 910 aa17.48■□□□□ 0.39
RAPGEF4-201ENST00000397081 DNAAF4Q8WXU2 420 aa17.48■□□□□ 0.39
RAPGEF4-201ENST00000397081 SOS1Q07889 1333 aaPredicted RBP17.47■□□□□ 0.39
RAPGEF4-201ENST00000397081 HSPA4P34932 840 aa17.47■□□□□ 0.39
RAPGEF4-201ENST00000397081 HSPA2P54652 639 aa17.47■□□□□ 0.39
RAPGEF4-201ENST00000397081 SF3A1Q15459 793 aaKnown RBP17.47■□□□□ 0.39
RAPGEF4-201ENST00000397081 KLHDC4Q8TBB5 520 aa17.47■□□□□ 0.39
RAPGEF4-201ENST00000397081 MAPK8IP2Q13387 824 aaPredicted RBP17.47■□□□□ 0.39
RAPGEF4-201ENST00000397081 HSP90AB4PQ58FF6 505 aa17.47■□□□□ 0.39
RAPGEF4-201ENST00000397081 MYRIPQ8NFW9 859 aa17.47■□□□□ 0.39
RAPGEF4-201ENST00000397081 SETBP1Q9Y6X0 1596 aa17.47■□□□□ 0.39
RAPGEF4-201ENST00000397081 SGSM2O43147 1006 aa17.47■□□□□ 0.39
RAPGEF4-201ENST00000397081 GORABQ5T7V8 394 aa17.47■□□□□ 0.39
RAPGEF4-201ENST00000397081 FAM227BQ96M60 508 aa17.47■□□□□ 0.39
RAPGEF4-201ENST00000397081 DNAJC25Q9H1X3 360 aa17.47■□□□□ 0.39
RAPGEF4-201ENST00000397081 CUL4AQ13619 759 aa17.47■□□□□ 0.39
RAPGEF4-201ENST00000397081 RNF20Q5VTR2 975 aa17.47■□□□□ 0.39
RAPGEF4-201ENST00000397081 RIC3Q7Z5B4 369 aa17.47■□□□□ 0.39
RAPGEF4-201ENST00000397081 PROSER2Q86WR7 435 aaPredicted RBP17.47■□□□□ 0.39
RAPGEF4-201ENST00000397081 A0A087WWV3 80 aa17.46■□□□□ 0.39
RAPGEF4-201ENST00000397081 PIP4K2AP48426 406 aaPredicted RBP17.46■□□□□ 0.39
RAPGEF4-201ENST00000397081 RBM8AQ9Y5S9 174 aaKnown RBP17.46■□□□□ 0.39
RAPGEF4-201ENST00000397081 PSME1Q06323 249 aa17.46■□□□□ 0.39
RAPGEF4-201ENST00000397081 ZNF530Q6P9A1 599 aaPredicted RBP17.46■□□□□ 0.39
RAPGEF4-201ENST00000397081 NEUROD6Q96NK8 337 aa17.46■□□□□ 0.39
RAPGEF4-201ENST00000397081 TNNT1P13805 278 aa17.46■□□□□ 0.39
RAPGEF4-201ENST00000397081 C1orf141Q5JVX7 400 aa17.46■□□□□ 0.39
RAPGEF4-201ENST00000397081 ERCC4Q92889 916 aaPredicted RBP17.46■□□□□ 0.39
RAPGEF4-201ENST00000397081 CCDC94Q9BW85 323 aaPredicted RBP17.46■□□□□ 0.39
RAPGEF4-201ENST00000397081 BCL2L12Q9HB09 334 aa17.46■□□□□ 0.39
RAPGEF4-201ENST00000397081 EDC4Q6P2E9 1401 aaKnown RBP17.45■□□□□ 0.38
RAPGEF4-201ENST00000397081 KIAA1210Q9ULL0 1709 aa17.45■□□□□ 0.38
RAPGEF4-201ENST00000397081 MED14O60244 1454 aa17.45■□□□□ 0.38
RAPGEF4-201ENST00000397081 BTBD11A6QL63 1104 aa17.45■□□□□ 0.38
RAPGEF4-201ENST00000397081 ZBTB9Q96C00 473 aa17.45■□□□□ 0.38
RAPGEF4-201ENST00000397081 ATP10DQ9P241 1426 aa17.45■□□□□ 0.38
RAPGEF4-201ENST00000397081 PRR36Q9H6K5 1346 aa17.45■□□□□ 0.38
RAPGEF4-201ENST00000397081 LIG1P18858 919 aa17.45■□□□□ 0.38
RAPGEF4-201ENST00000397081 EDC3Q96F86 508 aaKnown RBP17.45■□□□□ 0.38
RAPGEF4-201ENST00000397081 KCNQ3O43525 872 aa17.45■□□□□ 0.38
RAPGEF4-201ENST00000397081 CDC37L1Q7L3B6 337 aa17.45■□□□□ 0.38
RAPGEF4-201ENST00000397081 CCDC112Q8NEF3 446 aa17.45■□□□□ 0.38
RAPGEF4-201ENST00000397081 ZNF165P49910 485 aa17.44■□□□□ 0.38
RAPGEF4-201ENST00000397081 ECHDC1Q9NTX5 307 aa17.44■□□□□ 0.38
RAPGEF4-201ENST00000397081 UVSSAQ2YD98 709 aa17.44■□□□□ 0.38
RAPGEF4-201ENST00000397081 STK11IPQ8N1F8 1099 aa17.44■□□□□ 0.38
RAPGEF4-201ENST00000397081 PRIMPOLQ96LW4 560 aa17.44■□□□□ 0.38
RAPGEF4-201ENST00000397081 TYRO3Q06418 890 aa17.44■□□□□ 0.38
RAPGEF4-201ENST00000397081 SYTL4Q96C24 671 aaPredicted RBP17.44■□□□□ 0.38
RAPGEF4-201ENST00000397081 SDF4Q9BRK5 362 aa17.44■□□□□ 0.38
RAPGEF4-201ENST00000397081 CLIP2Q9UDT6 1046 aa17.44■□□□□ 0.38
RAPGEF4-201ENST00000397081 MAP3K2Q9Y2U5 619 aa17.44■□□□□ 0.38
RAPGEF4-201ENST00000397081 TBX22Q9Y458 520 aa17.44■□□□□ 0.38
RAPGEF4-201ENST00000397081 OSBPL3Q9H4L5 887 aa17.44■□□□□ 0.38
RAPGEF4-201ENST00000397081 NRBP1Q9UHY1 535 aa17.44■□□□□ 0.38
RAPGEF4-201ENST00000397081 RAD50Q92878 1312 aa17.43■□□□□ 0.38
RAPGEF4-201ENST00000397081 PTPRMP28827 1452 aa17.43■□□□□ 0.38
RAPGEF4-201ENST00000397081 PSMA5P28066 241 aa17.43■□□□□ 0.38
RAPGEF4-201ENST00000397081 CCT2P78371 535 aaKnown RBP17.43■□□□□ 0.38
RAPGEF4-201ENST00000397081 ME3Q16798 604 aa17.43■□□□□ 0.38
RAPGEF4-201ENST00000397081 LGR6Q9HBX8 967 aa17.43■□□□□ 0.38
RAPGEF4-201ENST00000397081 SPATA31D1Q6ZQQ2 1576 aa17.43■□□□□ 0.38
RAPGEF4-201ENST00000397081 IL17REQ8NFR9 667 aa17.43■□□□□ 0.38
RAPGEF4-201ENST00000397081 COL3A1P02461 1466 aaPredicted RBP17.43■□□□□ 0.38
RAPGEF4-201ENST00000397081 PDCP20941 246 aa17.42■□□□□ 0.38
RAPGEF4-201ENST00000397081 TERF1P54274 439 aa17.42■□□□□ 0.38
RAPGEF4-201ENST00000397081 RAB11FIP4Q86YS3 637 aa17.42■□□□□ 0.38
RAPGEF4-201ENST00000397081 NMIQ13287 307 aaPredicted RBP17.42■□□□□ 0.38
RAPGEF4-201ENST00000397081 NEURL4Q96JN8 1562 aa17.41■□□□□ 0.38
RAPGEF4-201ENST00000397081 HTATSF1O43719 755 aaKnown RBP17.41■□□□□ 0.38
RAPGEF4-201ENST00000397081 ME1P48163 572 aa17.41■□□□□ 0.38
RAPGEF4-201ENST00000397081 ISM2Q6H9L7 571 aa17.41■□□□□ 0.38
RAPGEF4-201ENST00000397081 LARP1Q6PKG0 1096 aaKnown RBP17.41■□□□□ 0.38
RAPGEF4-201ENST00000397081 CCDC73Q6ZRK6 1079 aa17.41■□□□□ 0.38
RAPGEF4-201ENST00000397081 FAM200AQ8TCP9 573 aa17.41■□□□□ 0.38
RAPGEF4-201ENST00000397081 ZSCAN31Q96LW9 406 aaPredicted RBP17.41■□□□□ 0.38
RAPGEF4-201ENST00000397081 ERICH4A6NGS2 130 aa17.41■□□□□ 0.38
RAPGEF4-201ENST00000397081 TTC6Q86TZ1 520 aa17.41■□□□□ 0.38
RAPGEF4-201ENST00000397081 MTMR6Q9Y217 621 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms