RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 COPS6Q7L5N1 327 aa21.05■□□□□ 0.96
AP1S3-202ENST00000396653 LRP5O75197 1615 aa21.04■□□□□ 0.96
AP1S3-202ENST00000396653 SLC4A2P04920 1241 aa21.04■□□□□ 0.96
AP1S3-202ENST00000396653 CLEC4GQ6UXB4 293 aa21.04■□□□□ 0.96
AP1S3-202ENST00000396653 NLGN1Q8N2Q7 840 aa21.04■□□□□ 0.96
AP1S3-202ENST00000396653 BCL2L12Q9HB09 334 aa21.04■□□□□ 0.96
AP1S3-202ENST00000396653 ZNF652Q9Y2D9 606 aa21.04■□□□□ 0.96
AP1S3-202ENST00000396653 TCERG1O14776 1098 aaKnown RBP21.03■□□□□ 0.96
AP1S3-202ENST00000396653 PHAXQ9H814 394 aaKnown RBP21.03■□□□□ 0.96
AP1S3-202ENST00000396653 BRPF1P55201 1214 aaPredicted RBP21.02■□□□□ 0.96
AP1S3-202ENST00000396653 AIMP1Q12904 312 aaKnown RBP21.02■□□□□ 0.96
AP1S3-202ENST00000396653 PLBD2Q8NHP8 589 aa21.02■□□□□ 0.96
AP1S3-202ENST00000396653 SSH1Q8WYL5 1049 aa21.02■□□□□ 0.96
AP1S3-202ENST00000396653 ARXQ96QS3 562 aa21.02■□□□□ 0.96
AP1S3-202ENST00000396653 ATP10DQ9P241 1426 aa21.02■□□□□ 0.96
AP1S3-202ENST00000396653 NRXN2Q9P2S2 1712 aa21.01■□□□□ 0.95
AP1S3-202ENST00000396653 ZBTB7AO95365 584 aa21.01■□□□□ 0.95
AP1S3-202ENST00000396653 DDX58O95786 925 aaKnown RBP21.01■□□□□ 0.95
AP1S3-202ENST00000396653 RARSP54136 660 aaKnown RBP21.01■□□□□ 0.95
AP1S3-202ENST00000396653 FLIIQ13045 1269 aa21.01■□□□□ 0.95
AP1S3-202ENST00000396653 MRPL50Q8N5N7 158 aaKnown RBP21.01■□□□□ 0.95
AP1S3-202ENST00000396653 FKBP8Q14318 412 aa21■□□□□ 0.95
AP1S3-202ENST00000396653 GIGYF2Q6Y7W6 1299 aaKnown RBP21■□□□□ 0.95
AP1S3-202ENST00000396653 ANKRD13DQ6ZTN6 518 aa21■□□□□ 0.95
AP1S3-202ENST00000396653 SMC4Q9NTJ3 1288 aa21■□□□□ 0.95
AP1S3-202ENST00000396653 AFDNP55196 1824 aaKnown RBP20.99■□□□□ 0.95
AP1S3-202ENST00000396653 HSP90AB3PQ58FF7 597 aa20.99■□□□□ 0.95
AP1S3-202ENST00000396653 G2E3Q7L622 706 aa20.99■□□□□ 0.95
AP1S3-202ENST00000396653 ZBTB3Q9H5J0 574 aa20.99■□□□□ 0.95
AP1S3-202ENST00000396653 SPON1Q9HCB6 807 aa20.99■□□□□ 0.95
AP1S3-202ENST00000396653 N4BP2Q86UW6 1770 aaPredicted RBP20.99■□□□□ 0.95
AP1S3-202ENST00000396653 HLFQ16534 295 aa20.98■□□□□ 0.95
AP1S3-202ENST00000396653 MSL1Q68DK7 614 aa20.98■□□□□ 0.95
AP1S3-202ENST00000396653 SGIP1Q9BQI5 828 aa20.98■□□□□ 0.95
AP1S3-202ENST00000396653 PTPRCP08575 1304 aa20.98■□□□□ 0.95
AP1S3-202ENST00000396653 TM4SF1P30408 202 aa20.97■□□□□ 0.95
AP1S3-202ENST00000396653 KSR2Q6VAB6 950 aa20.97■□□□□ 0.95
AP1S3-202ENST00000396653 KIF16BQ96L93 1317 aa20.97■□□□□ 0.95
AP1S3-202ENST00000396653 ADCY9O60503 1353 aa20.97■□□□□ 0.95
AP1S3-202ENST00000396653 POLD1P28340 1107 aa20.96■□□□□ 0.95
AP1S3-202ENST00000396653 FKBP5Q13451 457 aaPredicted RBP20.96■□□□□ 0.95
AP1S3-202ENST00000396653 NFIXQ14938 502 aa20.96■□□□□ 0.95
AP1S3-202ENST00000396653 TBC1D9BQ66K14 1250 aa20.96■□□□□ 0.95
AP1S3-202ENST00000396653 RIC3Q7Z5B4 369 aa20.96■□□□□ 0.95
AP1S3-202ENST00000396653 BCL2L13Q9BXK5 485 aa20.96■□□□□ 0.95
AP1S3-202ENST00000396653 ATF5Q9Y2D1 282 aaPredicted RBP20.96■□□□□ 0.95
AP1S3-202ENST00000396653 CARMIL3Q8ND23 1372 aa20.96■□□□□ 0.95
AP1S3-202ENST00000396653 PTGER2P43116 358 aa20.95■□□□□ 0.94
AP1S3-202ENST00000396653 IBTKQ9P2D0 1353 aaPredicted RBP20.95■□□□□ 0.94
AP1S3-202ENST00000396653 KIF13BQ9NQT8 1826 aa20.94■□□□□ 0.94
AP1S3-202ENST00000396653 PXDNLA1KZ92 1463 aa20.94■□□□□ 0.94
AP1S3-202ENST00000396653 PI4KAP2A4QPH2 592 aa20.94■□□□□ 0.94
AP1S3-202ENST00000396653 MMP10P09238 476 aa20.94■□□□□ 0.94
AP1S3-202ENST00000396653 TCIRG1Q13488 830 aa20.94■□□□□ 0.94
AP1S3-202ENST00000396653 ZNF34Q8IZ26 560 aa20.94■□□□□ 0.94
AP1S3-202ENST00000396653 PI4KAP1Q8N8J0 262 aa20.94■□□□□ 0.94
AP1S3-202ENST00000396653 DDR1Q08345 913 aa20.93■□□□□ 0.94
AP1S3-202ENST00000396653 PARP10Q53GL7 1025 aa20.93■□□□□ 0.94
AP1S3-202ENST00000396653 SETDB2Q96T68 719 aa20.93■□□□□ 0.94
AP1S3-202ENST00000396653 METTL22Q9BUU2 404 aaPredicted RBP20.93■□□□□ 0.94
AP1S3-202ENST00000396653 NIP7Q9Y221 180 aaKnown RBP eCLIP20.93■□□□□ 0.94
AP1S3-202ENST00000396653 MAP3K2Q9Y2U5 619 aa20.93■□□□□ 0.94
AP1S3-202ENST00000396653 POLRMTO00411 1230 aaKnown RBP20.92■□□□□ 0.94
AP1S3-202ENST00000396653 DNAAF4Q8WXU2 420 aa20.92■□□□□ 0.94
AP1S3-202ENST00000396653 ISCA1Q9BUE6 129 aa20.92■□□□□ 0.94
AP1S3-202ENST00000396653 PARP3Q9Y6F1 533 aa20.92■□□□□ 0.94
AP1S3-202ENST00000396653 TRIM28Q13263 835 aaKnown RBP20.91■□□□□ 0.94
AP1S3-202ENST00000396653 ARHGAP45Q92619 1136 aa20.91■□□□□ 0.94
AP1S3-202ENST00000396653 RCAN3Q9UKA8 241 aa20.91■□□□□ 0.94
AP1S3-202ENST00000396653 UBN2Q6ZU65 1347 aa20.9■□□□□ 0.94
AP1S3-202ENST00000396653 BCAR3O75815 825 aa20.9■□□□□ 0.94
AP1S3-202ENST00000396653 NEXNQ0ZGT2 675 aa20.9■□□□□ 0.94
AP1S3-202ENST00000396653 BICDL1Q6ZP65 573 aa20.9■□□□□ 0.94
AP1S3-202ENST00000396653 LAMB2P55268 1798 aa20.9■□□□□ 0.94
AP1S3-202ENST00000396653 C10orf71Q711Q0 1435 aa20.89■□□□□ 0.94
AP1S3-202ENST00000396653 RNF123Q5XPI4 1314 aa20.89■□□□□ 0.93
AP1S3-202ENST00000396653 SERPINB2P05120 415 aa20.89■□□□□ 0.93
AP1S3-202ENST00000396653 API5Q9BZZ5 524 aaKnown RBP20.89■□□□□ 0.93
AP1S3-202ENST00000396653 NOB1Q9ULX3 412 aaKnown RBP20.89■□□□□ 0.93
AP1S3-202ENST00000396653 IPO8O15397 1037 aaKnown RBP20.88■□□□□ 0.93
AP1S3-202ENST00000396653 GPTP24298 496 aa20.88■□□□□ 0.93
AP1S3-202ENST00000396653 NLRP10Q86W26 655 aa20.88■□□□□ 0.93
AP1S3-202ENST00000396653 MYD88Q99836 296 aa20.88■□□□□ 0.93
AP1S3-202ENST00000396653 NYXQ9GZU5 481 aa20.88■□□□□ 0.93
AP1S3-202ENST00000396653 ANKRD31Q8N7Z5 1873 aa20.88■□□□□ 0.93
AP1S3-202ENST00000396653 PPP1R42Q7Z4L9 355 aa20.87■□□□□ 0.93
AP1S3-202ENST00000396653 CCDC191Q8NCU4 936 aa20.87■□□□□ 0.93
AP1S3-202ENST00000396653 RIC1Q4ADV7 1423 aa20.87■□□□□ 0.93
AP1S3-202ENST00000396653 F6X3S4 739 aa20.86■□□□□ 0.93
AP1S3-202ENST00000396653 NBPF5PQ86XG9 351 aaPredicted RBP20.86■□□□□ 0.93
AP1S3-202ENST00000396653 LINS1Q8NG48 757 aa20.86■□□□□ 0.93
AP1S3-202ENST00000396653 KIAA1551Q9HCM1 1747 aa20.85■□□□□ 0.93
AP1S3-202ENST00000396653 ATP5J2-PTCD1G3V325 749 aa20.85■□□□□ 0.93
AP1S3-202ENST00000396653 NTSR2O95665 410 aa20.85■□□□□ 0.93
AP1S3-202ENST00000396653 IGKV5-2P06315 115 aa20.85■□□□□ 0.93
AP1S3-202ENST00000396653 BEND3Q5T5X7 828 aa20.85■□□□□ 0.93
AP1S3-202ENST00000396653 SUSD4Q5VX71 490 aa20.85■□□□□ 0.93
AP1S3-202ENST00000396653 ZKSCAN2Q63HK3 967 aa20.85■□□□□ 0.93
AP1S3-202ENST00000396653 PRR5LQ6MZQ0 368 aa20.85■□□□□ 0.93
AP1S3-202ENST00000396653 TPTE2Q6XPS3 522 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms