RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 UVSSAQ2YD98 709 aa11.79□□□□□ -0.52
TRIM39-203ENST00000396547 NPHP3Q7Z494 1330 aa11.79□□□□□ -0.52
TRIM39-203ENST00000396547 SSH2Q76I76 1423 aa11.79□□□□□ -0.52
TRIM39-203ENST00000396547 LRP6O75581 1613 aa11.79□□□□□ -0.52
TRIM39-203ENST00000396547 PLEKHG3A1L390 1219 aa11.79□□□□□ -0.52
TRIM39-203ENST00000396547 CWC27Q6UX04 472 aaKnown RBP11.79□□□□□ -0.52
TRIM39-203ENST00000396547 INTS4Q96HW7 963 aaKnown RBP11.79□□□□□ -0.52
TRIM39-203ENST00000396547 DIAPH3Q9NSV4 1193 aa11.79□□□□□ -0.52
TRIM39-203ENST00000396547 CDK12Q9NYV4 1490 aaPredicted RBP11.78□□□□□ -0.52
TRIM39-203ENST00000396547 AK2P54819 239 aa11.78□□□□□ -0.52
TRIM39-203ENST00000396547 LRMPQ12912 555 aa11.78□□□□□ -0.52
TRIM39-203ENST00000396547 KCNF1Q9H3M0 494 aa11.78□□□□□ -0.52
TRIM39-203ENST00000396547 LRRFIP2Q9Y608 721 aaKnown RBP11.78□□□□□ -0.52
TRIM39-203ENST00000396547 TNS3Q68CZ2 1445 aa11.78□□□□□ -0.52
TRIM39-203ENST00000396547 NPHP1O15259 732 aa11.77□□□□□ -0.52
TRIM39-203ENST00000396547 UBE2HP62256 183 aa11.77□□□□□ -0.52
TRIM39-203ENST00000396547 LUZP1Q86V48 1076 aa11.77□□□□□ -0.52
TRIM39-203ENST00000396547 NECAB1Q8N987 351 aa11.77□□□□□ -0.52
TRIM39-203ENST00000396547 NRAPQ86VF7 1730 aa11.77□□□□□ -0.52
TRIM39-203ENST00000396547 SURF6O75683 361 aaKnown RBP11.77□□□□□ -0.53
TRIM39-203ENST00000396547 RTF1Q92541 710 aaKnown RBP11.77□□□□□ -0.53
TRIM39-203ENST00000396547 RBM33Q96EV2 1170 aaKnown RBP11.77□□□□□ -0.53
TRIM39-203ENST00000396547 STK31Q9BXU1 1019 aa11.77□□□□□ -0.53
TRIM39-203ENST00000396547 CASTP20810 708 aaKnown RBP11.77□□□□□ -0.53
TRIM39-203ENST00000396547 MAPK8IP2Q13387 824 aaPredicted RBP11.77□□□□□ -0.53
TRIM39-203ENST00000396547 CCDC186Q7Z3E2 898 aa11.77□□□□□ -0.53
TRIM39-203ENST00000396547 RASEFQ8IZ41 740 aa11.77□□□□□ -0.53
TRIM39-203ENST00000396547 KIAA1524Q8TCG1 905 aa11.77□□□□□ -0.53
TRIM39-203ENST00000396547 LRRC59Q96AG4 307 aaKnown RBP11.77□□□□□ -0.53
TRIM39-203ENST00000396547 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.77□□□□□ -0.53
TRIM39-203ENST00000396547 NRBP1Q9UHY1 535 aa11.77□□□□□ -0.53
TRIM39-203ENST00000396547 V9GYY5 206 aaPredicted RBP11.77□□□□□ -0.53
TRIM39-203ENST00000396547 SLIT3O75094 1523 aa11.76□□□□□ -0.53
TRIM39-203ENST00000396547 LARGE1O95461 756 aa11.76□□□□□ -0.53
TRIM39-203ENST00000396547 CGNQ9P2M7 1197 aaKnown RBP11.76□□□□□ -0.53
TRIM39-203ENST00000396547 TFIP11Q9UBB9 837 aaKnown RBP11.76□□□□□ -0.53
TRIM39-203ENST00000396547 PRR36Q9H6K5 1346 aa11.76□□□□□ -0.53
TRIM39-203ENST00000396547 GJB2P29033 226 aa11.76□□□□□ -0.53
TRIM39-203ENST00000396547 COL14A1Q05707 1796 aaKnown RBP11.76□□□□□ -0.53
TRIM39-203ENST00000396547 GOLGA6L4A6NEF3 574 aa11.75□□□□□ -0.53
TRIM39-203ENST00000396547 GOLGA6L6A8MZA4 724 aa11.75□□□□□ -0.53
TRIM39-203ENST00000396547 CHL1O00533 1208 aa11.75□□□□□ -0.53
TRIM39-203ENST00000396547 F13A1P00488 732 aa11.75□□□□□ -0.53
TRIM39-203ENST00000396547 HAP1P54257 671 aaPredicted RBP11.75□□□□□ -0.53
TRIM39-203ENST00000396547 HSP90AB2PQ58FF8 381 aa11.75□□□□□ -0.53
TRIM39-203ENST00000396547 UTP14CQ5TAP6 766 aaKnown RBP11.75□□□□□ -0.53
TRIM39-203ENST00000396547 TRIM5Q9C035 493 aa11.75□□□□□ -0.53
TRIM39-203ENST00000396547 CPSF1Q10570 1443 aaKnown RBP11.75□□□□□ -0.53
TRIM39-203ENST00000396547 ARHGEF10O15013 1369 aa11.75□□□□□ -0.53
TRIM39-203ENST00000396547 KCNJ4P48050 445 aa11.75□□□□□ -0.53
TRIM39-203ENST00000396547 TCEANC2Q96MN5 208 aa11.75□□□□□ -0.53
TRIM39-203ENST00000396547 PLCH1Q4KWH8 1693 aa11.75□□□□□ -0.53
TRIM39-203ENST00000396547 CD163L1Q9NR16 1453 aa11.75□□□□□ -0.53
TRIM39-203ENST00000396547 LETM1O95202 739 aaPredicted RBP11.75□□□□□ -0.53
TRIM39-203ENST00000396547 CCT4P50991 539 aaKnown RBP11.75□□□□□ -0.53
TRIM39-203ENST00000396547 PIP4K2BP78356 416 aa11.75□□□□□ -0.53
TRIM39-203ENST00000396547 OS9Q13438 667 aaPredicted RBP11.75□□□□□ -0.53
TRIM39-203ENST00000396547 EIF4A2Q14240 407 aaKnown RBP11.75□□□□□ -0.53
TRIM39-203ENST00000396547 RUFY3Q7L099 469 aa11.75□□□□□ -0.53
TRIM39-203ENST00000396547 SNX14Q9Y5W7 946 aa11.75□□□□□ -0.53
TRIM39-203ENST00000396547 SPATA31A3Q5VYP0 1347 aa11.74□□□□□ -0.53
TRIM39-203ENST00000396547 TCHHQ07283 1943 aa11.74□□□□□ -0.53
TRIM39-203ENST00000396547 CCDC192P0DO97 292 aa11.74□□□□□ -0.53
TRIM39-203ENST00000396547 FBXW7Q969H0 707 aa11.74□□□□□ -0.53
TRIM39-203ENST00000396547 GTPBP4Q9BZE4 634 aaKnown RBP11.74□□□□□ -0.53
TRIM39-203ENST00000396547 OSBPL3Q9H4L5 887 aa11.74□□□□□ -0.53
TRIM39-203ENST00000396547 LIMCH1Q9UPQ0 1083 aa11.74□□□□□ -0.53
TRIM39-203ENST00000396547 PTPRCP08575 1304 aa11.74□□□□□ -0.53
TRIM39-203ENST00000396547 ANAPC15P60006 121 aa11.74□□□□□ -0.53
TRIM39-203ENST00000396547 C14orf37Q86TY3 774 aa11.74□□□□□ -0.53
TRIM39-203ENST00000396547 JAKMIP1Q96N16 626 aaKnown RBP11.74□□□□□ -0.53
TRIM39-203ENST00000396547 SPTLC3Q9NUV7 552 aa11.74□□□□□ -0.53
TRIM39-203ENST00000396547 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.74□□□□□ -0.53
TRIM39-203ENST00000396547 ZBTB22O15209 634 aa11.73□□□□□ -0.53
TRIM39-203ENST00000396547 TPD52L1Q16890 204 aaPredicted RBP11.73□□□□□ -0.53
TRIM39-203ENST00000396547 ANKRD26Q9UPS8 1709 aa11.73□□□□□ -0.53
TRIM39-203ENST00000396547 TNNT1P13805 278 aa11.73□□□□□ -0.53
TRIM39-203ENST00000396547 ATP6V1DQ9Y5K8 247 aa11.73□□□□□ -0.53
TRIM39-203ENST00000396547 RPAP1Q9BWH6 1393 aaPredicted RBP11.73□□□□□ -0.53
TRIM39-203ENST00000396547 HSPA4P34932 840 aa11.73□□□□□ -0.53
TRIM39-203ENST00000396547 GTF2F1P35269 517 aaKnown RBP eCLIP11.73□□□□□ -0.53
TRIM39-203ENST00000396547 PRPF40BQ6NWY9 871 aaKnown RBP11.73□□□□□ -0.53
TRIM39-203ENST00000396547 LMO7Q8WWI1 1683 aa11.73□□□□□ -0.53
TRIM39-203ENST00000396547 PIK3C2AO00443 1686 aa11.72□□□□□ -0.53
TRIM39-203ENST00000396547 LIG1P18858 919 aa11.72□□□□□ -0.53
TRIM39-203ENST00000396547 FOSBP53539 338 aa11.72□□□□□ -0.53
TRIM39-203ENST00000396547 STK3Q13188 491 aa11.72□□□□□ -0.53
TRIM39-203ENST00000396547 NUDT16Q96DE0 195 aaKnown RBP11.72□□□□□ -0.53
TRIM39-203ENST00000396547 PHF8Q9UPP1 1060 aa11.72□□□□□ -0.53
TRIM39-203ENST00000396547 EIF2S2P20042 333 aaKnown RBP11.72□□□□□ -0.53
TRIM39-203ENST00000396547 ATP8B2P98198 1209 aa11.72□□□□□ -0.53
TRIM39-203ENST00000396547 FLIIQ13045 1269 aa11.72□□□□□ -0.53
TRIM39-203ENST00000396547 BBXQ8WY36 941 aaPredicted RBP11.72□□□□□ -0.53
TRIM39-203ENST00000396547 GNAI3P08754 354 aa11.71□□□□□ -0.53
TRIM39-203ENST00000396547 UBTFL1P0CB47 393 aaPredicted RBP11.71□□□□□ -0.53
TRIM39-203ENST00000396547 CEBPZQ03701 1054 aaKnown RBP11.71□□□□□ -0.53
TRIM39-203ENST00000396547 PSME1Q06323 249 aa11.71□□□□□ -0.53
TRIM39-203ENST00000396547 ADCK5Q3MIX3 580 aa11.71□□□□□ -0.53
TRIM39-203ENST00000396547 ANO6Q4KMQ2 910 aa11.71□□□□□ -0.53
TRIM39-203ENST00000396547 LARP1BQ659C4 914 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms