RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 RALBP1Q15311 655 aa21.56■■□□□ 1.04
DDR1-229ENST00000396342 NYXQ9GZU5 481 aa21.56■■□□□ 1.04
DDR1-229ENST00000396342 ARFGEF1Q9Y6D6 1849 aa21.55■■□□□ 1.04
DDR1-229ENST00000396342 NPR1P16066 1061 aa21.55■■□□□ 1.04
DDR1-229ENST00000396342 LMOD3Q0VAK6 560 aa21.55■■□□□ 1.04
DDR1-229ENST00000396342 NGEFQ8N5V2 710 aa21.55■■□□□ 1.04
DDR1-229ENST00000396342 MIS18AQ9NYP9 233 aa21.55■■□□□ 1.04
DDR1-229ENST00000396342 SRGNP10124 158 aa21.54■■□□□ 1.04
DDR1-229ENST00000396342 PRPF40BQ6NWY9 871 aaKnown RBP21.54■■□□□ 1.04
DDR1-229ENST00000396342 PRAMEF22A3QJZ6 481 aa21.53■■□□□ 1.04
DDR1-229ENST00000396342 FAM177BA6PVY3 158 aa21.53■■□□□ 1.04
DDR1-229ENST00000396342 ALDH1B1P30837 517 aa21.53■■□□□ 1.04
DDR1-229ENST00000396342 TMX4Q9H1E5 349 aaPredicted RBP21.53■■□□□ 1.04
DDR1-229ENST00000396342 RRP7AQ9Y3A4 280 aaKnown RBP21.53■■□□□ 1.04
DDR1-229ENST00000396342 NFKBIEO00221 500 aa21.52■■□□□ 1.04
DDR1-229ENST00000396342 CCDC93Q567U6 631 aa21.52■■□□□ 1.04
DDR1-229ENST00000396342 LTBP3Q9NS15 1303 aa21.51■■□□□ 1.03
DDR1-229ENST00000396342 BRCA1P38398 1863 aaKnown RBP21.5■■□□□ 1.03
DDR1-229ENST00000396342 ERVV-1B6SEH8 477 aa21.5■■□□□ 1.03
DDR1-229ENST00000396342 RTKN2Q8IZC4 609 aa21.5■■□□□ 1.03
DDR1-229ENST00000396342 TSPYL4Q9UJ04 414 aa21.5■■□□□ 1.03
DDR1-229ENST00000396342 NRXN2Q9P2S2 1712 aa21.49■■□□□ 1.03
DDR1-229ENST00000396342 NBPF26B4DH59 902 aa21.49■■□□□ 1.03
DDR1-229ENST00000396342 MYL6BP14649 208 aa21.49■■□□□ 1.03
DDR1-229ENST00000396342 NBPF10Q6P3W6 841 aaKnown RBP21.49■■□□□ 1.03
DDR1-229ENST00000396342 NBPF15Q8N660 670 aa21.49■■□□□ 1.03
DDR1-229ENST00000396342 RIPK4P57078 832 aa21.48■■□□□ 1.03
DDR1-229ENST00000396342 WDR43Q15061 677 aaKnown RBP eCLIP21.48■■□□□ 1.03
DDR1-229ENST00000396342 RPGRQ92834 1020 aaKnown RBP21.48■■□□□ 1.03
DDR1-229ENST00000396342 VIRMAQ69YN4 1812 aaKnown RBP21.48■■□□□ 1.03
DDR1-229ENST00000396342 SCN7AQ01118 1682 aa21.47■■□□□ 1.03
DDR1-229ENST00000396342 IQCA1LA6NCM1 817 aa21.47■■□□□ 1.03
DDR1-229ENST00000396342 EIF4A1P60842 406 aaKnown RBP21.47■■□□□ 1.03
DDR1-229ENST00000396342 PLEKHF1Q96S99 279 aa21.47■■□□□ 1.03
DDR1-229ENST00000396342 AFDNP55196 1824 aaKnown RBP21.46■■□□□ 1.03
DDR1-229ENST00000396342 ERBB4Q15303 1308 aa21.46■■□□□ 1.03
DDR1-229ENST00000396342 MAP3K15Q6ZN16 1313 aa21.46■■□□□ 1.03
DDR1-229ENST00000396342 SIPA1L3O60292 1781 aaPredicted RBP21.46■■□□□ 1.03
DDR1-229ENST00000396342 IFFO2Q5TF58 517 aa21.45■■□□□ 1.02
DDR1-229ENST00000396342 PPP1R42Q7Z4L9 355 aa21.45■■□□□ 1.02
DDR1-229ENST00000396342 BABAM1Q9NWV8 329 aa21.45■■□□□ 1.02
DDR1-229ENST00000396342 FKBP4Q02790 459 aaKnown RBP eCLIP21.44■■□□□ 1.02
DDR1-229ENST00000396342 HLFQ16534 295 aa21.44■■□□□ 1.02
DDR1-229ENST00000396342 GRIPAP1Q4V328 841 aa21.44■■□□□ 1.02
DDR1-229ENST00000396342 CC2D2BQ6DHV5 1058 aa21.44■■□□□ 1.02
DDR1-229ENST00000396342 KLRG1Q96E93 195 aa21.44■■□□□ 1.02
DDR1-229ENST00000396342 THUMPD2Q9BTF0 503 aaKnown RBP21.44■■□□□ 1.02
DDR1-229ENST00000396342 EIF2S2P20042 333 aaKnown RBP21.43■■□□□ 1.02
DDR1-229ENST00000396342 JDP2Q8WYK2 163 aa21.43■■□□□ 1.02
DDR1-229ENST00000396342 ZBTB3Q9H5J0 574 aa21.43■■□□□ 1.02
DDR1-229ENST00000396342 KLRG2A4D1S0 409 aaPredicted RBP21.42■■□□□ 1.02
DDR1-229ENST00000396342 DDX10Q13206 875 aaKnown RBP21.42■■□□□ 1.02
DDR1-229ENST00000396342 PARP10Q53GL7 1025 aa21.42■■□□□ 1.02
DDR1-229ENST00000396342 RBM17Q96I25 401 aaKnown RBP21.42■■□□□ 1.02
DDR1-229ENST00000396342 MYBBP1AQ9BQG0 1328 aaKnown RBP21.42■■□□□ 1.02
DDR1-229ENST00000396342 TNRC6CQ9HCJ0 1690 aaKnown RBP21.41■■□□□ 1.02
DDR1-229ENST00000396342 GPTP24298 496 aa21.41■■□□□ 1.02
DDR1-229ENST00000396342 PRELPP51888 382 aa21.41■■□□□ 1.02
DDR1-229ENST00000396342 DNAJC5GQ8N7S2 189 aa21.41■■□□□ 1.02
DDR1-229ENST00000396342 NEUROD2Q15784 382 aa21.4■■□□□ 1.02
DDR1-229ENST00000396342 HSP90AB3PQ58FF7 597 aa21.4■■□□□ 1.02
DDR1-229ENST00000396342 DLEC1Q9Y238 1755 aa21.39■■□□□ 1.01
DDR1-229ENST00000396342 DDNO94850 711 aaPredicted RBP21.39■■□□□ 1.01
DDR1-229ENST00000396342 CHADLQ6NUI6 762 aa21.39■■□□□ 1.01
DDR1-229ENST00000396342 NUTM1Q86Y26 1132 aa21.39■■□□□ 1.01
DDR1-229ENST00000396342 LAS1LQ9Y4W2 734 aaKnown RBP21.39■■□□□ 1.01
DDR1-229ENST00000396342 TMPOP42166 694 aaKnown RBP21.38■■□□□ 1.01
DDR1-229ENST00000396342 GIGYF2Q6Y7W6 1299 aaKnown RBP21.38■■□□□ 1.01
DDR1-229ENST00000396342 TTLL7Q6ZT98 887 aa21.38■■□□□ 1.01
DDR1-229ENST00000396342 NLRP3Q96P20 1036 aa21.38■■□□□ 1.01
DDR1-229ENST00000396342 ZNF277Q9NRM2 450 aaPredicted RBP21.38■■□□□ 1.01
DDR1-229ENST00000396342 EIF6P56537 245 aaKnown RBP21.37■■□□□ 1.01
DDR1-229ENST00000396342 HTRA3P83110 453 aa21.37■■□□□ 1.01
DDR1-229ENST00000396342 SYNE4Q8N205 404 aa21.37■■□□□ 1.01
DDR1-229ENST00000396342 C7orf43Q8WVR3 580 aa21.37■■□□□ 1.01
DDR1-229ENST00000396342 IBTKQ9P2D0 1353 aaPredicted RBP21.36■■□□□ 1.01
DDR1-229ENST00000396342 IARSP41252 1262 aaKnown RBP21.36■■□□□ 1.01
DDR1-229ENST00000396342 RUNDC1Q96C34 613 aa21.36■■□□□ 1.01
DDR1-229ENST00000396342 UTP14AQ9BVJ6 771 aaKnown RBP21.36■■□□□ 1.01
DDR1-229ENST00000396342 CLEC11AQ9Y240 323 aa21.36■■□□□ 1.01
DDR1-229ENST00000396342 EAPPQ56P03 285 aaPredicted RBP21.35■■□□□ 1.01
DDR1-229ENST00000396342 PNMA8AQ86V59 439 aaPredicted RBP21.35■■□□□ 1.01
DDR1-229ENST00000396342 HACL1Q9UJ83 578 aa21.35■■□□□ 1.01
DDR1-229ENST00000396342 LMOD1P29536 600 aaPredicted RBP21.34■■□□□ 1.01
DDR1-229ENST00000396342 AIMP1Q12904 312 aaKnown RBP21.34■■□□□ 1.01
DDR1-229ENST00000396342 CRY2Q49AN0 593 aa21.34■■□□□ 1.01
DDR1-229ENST00000396342 SUSD4Q5VX71 490 aa21.34■■□□□ 1.01
DDR1-229ENST00000396342 LDHDQ86WU2 507 aa21.34■■□□□ 1.01
DDR1-229ENST00000396342 PSMD1Q99460 953 aa21.34■■□□□ 1.01
DDR1-229ENST00000396342 BCORQ6W2J9 1755 aa21.33■■□□□ 1.01
DDR1-229ENST00000396342 RNF123Q5XPI4 1314 aa21.33■■□□□ 1.01
DDR1-229ENST00000396342 CCDC146Q8IYE0 955 aa21.33■■□□□ 1.01
DDR1-229ENST00000396342 ZNF34Q8IZ26 560 aa21.33■■□□□ 1.01
DDR1-229ENST00000396342 JMYQ8N9B5 988 aa21.33■■□□□ 1.01
DDR1-229ENST00000396342 CRAMP1Q96RY5 1269 aa21.33■■□□□ 1.01
DDR1-229ENST00000396342 SBF1O95248 1867 aa21.32■■□□□ 1
DDR1-229ENST00000396342 PPEF1O14829 653 aaPredicted RBP21.32■■□□□ 1
DDR1-229ENST00000396342 HOXA10P31260 410 aaPredicted RBP21.32■■□□□ 1
DDR1-229ENST00000396342 CALD1Q05682 793 aaKnown RBP21.32■■□□□ 1
DDR1-229ENST00000396342 LARGE2Q8N3Y3 721 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms