RNA–Protein interactions for RNA: ENST00000396123.2

GREB1-206, Transcript of growth regulating estrogen receptor binding 1, humanhuman

TSL 1 (best) BASIC

Gene GREB1, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-206ENST00000396123 PIP4K2BP78356 416 aa15.22■□□□□ 0.03
GREB1-206ENST00000396123 LEKR1Q6ZMV7 388 aa15.22■□□□□ 0.03
GREB1-206ENST00000396123 ESYT1Q9BSJ8 1104 aa15.22■□□□□ 0.03
GREB1-206ENST00000396123 SNRPA1P09661 255 aaKnown RBP15.22■□□□□ 0.03
GREB1-206ENST00000396123 CLIP2Q9UDT6 1046 aa15.22■□□□□ 0.03
GREB1-206ENST00000396123 ARHGAP29Q52LW3 1261 aa15.22■□□□□ 0.03
GREB1-206ENST00000396123 UBXN4Q92575 508 aa15.22■□□□□ 0.03
GREB1-206ENST00000396123 ZNF287Q9HBT7 754 aa15.22■□□□□ 0.03
GREB1-206ENST00000396123 CHPF2Q9P2E5 772 aa15.22■□□□□ 0.03
GREB1-206ENST00000396123 FSIP1Q8NA03 581 aa15.22■□□□□ 0.03
GREB1-206ENST00000396123 ZBTB40Q9NUA8 1239 aa15.22■□□□□ 0.03
GREB1-206ENST00000396123 SMC5Q8IY18 1101 aa15.21■□□□□ 0.03
GREB1-206ENST00000396123 RNF41Q9H4P4 317 aaPredicted RBP15.21■□□□□ 0.03
GREB1-206ENST00000396123 EIF5P55010 431 aaKnown RBP15.21■□□□□ 0.03
GREB1-206ENST00000396123 ANKRD13DQ6ZTN6 518 aa15.21■□□□□ 0.03
GREB1-206ENST00000396123 RBM27Q9P2N5 1060 aaKnown RBP15.21■□□□□ 0.03
GREB1-206ENST00000396123 UHRF1BP1LA0JNW5 1464 aa15.21■□□□□ 0.03
GREB1-206ENST00000396123 PDCL2Q8N4E4 241 aa15.21■□□□□ 0.03
GREB1-206ENST00000396123 CTCFLQ8NI51 663 aaPredicted RBP15.21■□□□□ 0.03
GREB1-206ENST00000396123 DCTPP1Q9H773 170 aa15.21■□□□□ 0.03
GREB1-206ENST00000396123 ADAMTS12P58397 1594 aa15.21■□□□□ 0.02
GREB1-206ENST00000396123 COL17A1Q9UMD9 1497 aaPredicted RBP15.21■□□□□ 0.02
GREB1-206ENST00000396123 IFIT3O14879 490 aaKnown RBP15.21■□□□□ 0.02
GREB1-206ENST00000396123 IQCA1Q86XH1 822 aa15.21■□□□□ 0.02
GREB1-206ENST00000396123 TEX13AQ9BXU3 409 aaPredicted RBP15.21■□□□□ 0.02
GREB1-206ENST00000396123 EIF3JO75822 258 aaKnown RBP15.2■□□□□ 0.02
GREB1-206ENST00000396123 UHRF1BP1Q6BDS2 1440 aa15.2■□□□□ 0.02
GREB1-206ENST00000396123 GOLGA8AA7E2F4 631 aa15.2■□□□□ 0.02
GREB1-206ENST00000396123 MCM5P33992 734 aa15.2■□□□□ 0.02
GREB1-206ENST00000396123 RDXP35241 583 aaKnown RBP15.2■□□□□ 0.02
GREB1-206ENST00000396123 RBM5P52756 815 aaKnown RBP eCLIP15.2■□□□□ 0.024e-6■■■■□ 20.5
GREB1-206ENST00000396123 ZSCAN23Q3MJ62 389 aa15.2■□□□□ 0.02
GREB1-206ENST00000396123 CCDC82Q8N4S0 544 aa15.2■□□□□ 0.02
GREB1-206ENST00000396123 TSPYL6Q8N831 410 aa15.2■□□□□ 0.02
GREB1-206ENST00000396123 LDHAL6AQ6ZMR3 332 aa15.2■□□□□ 0.02
GREB1-206ENST00000396123 PHAXQ9H814 394 aaKnown RBP15.2■□□□□ 0.02
GREB1-206ENST00000396123 ZSCAN12O43309 604 aa15.2■□□□□ 0.02
GREB1-206ENST00000396123 ALDH1L1O75891 902 aa15.2■□□□□ 0.02
GREB1-206ENST00000396123 ZSCAN22P10073 491 aaPredicted RBP15.2■□□□□ 0.02
GREB1-206ENST00000396123 UVSSAQ2YD98 709 aa15.2■□□□□ 0.02
GREB1-206ENST00000396123 C16orf71Q8IYS4 520 aaPredicted RBP15.2■□□□□ 0.02
GREB1-206ENST00000396123 ZRANB1Q9UGI0 708 aa15.2■□□□□ 0.02
GREB1-206ENST00000396123 H0YHG0 523 aa15.19■□□□□ 0.02
GREB1-206ENST00000396123 USP5P45974 858 aa15.19■□□□□ 0.02
GREB1-206ENST00000396123 TTF1Q15361 905 aaPredicted RBP15.19■□□□□ 0.02
GREB1-206ENST00000396123 KIF18AQ8NI77 898 aa15.19■□□□□ 0.02
GREB1-206ENST00000396123 USP16Q9Y5T5 823 aa15.19■□□□□ 0.02
GREB1-206ENST00000396123 SSRP1Q08945 709 aaKnown RBP15.19■□□□□ 0.02
GREB1-206ENST00000396123 SNRKQ9NRH2 765 aa15.19■□□□□ 0.02
GREB1-206ENST00000396123 RIMS2Q9UQ26 1411 aa15.19■□□□□ 0.02
GREB1-206ENST00000396123 ADCY5O95622 1261 aa15.19■□□□□ 0.02
GREB1-206ENST00000396123 GPTP24298 496 aa15.19■□□□□ 0.02
GREB1-206ENST00000396123 ZSCAN29Q8IWY8 852 aaPredicted RBP15.19■□□□□ 0.02
GREB1-206ENST00000396123 MKNK2Q9HBH9 465 aa15.19■□□□□ 0.02
GREB1-206ENST00000396123 WDR7Q9Y4E6 1490 aa15.19■□□□□ 0.02
GREB1-206ENST00000396123 RANBP6O60518 1105 aaKnown RBP15.18■□□□□ 0.02
GREB1-206ENST00000396123 TOP1P11387 765 aaKnown RBP15.18■□□□□ 0.02
GREB1-206ENST00000396123 DNMT1P26358 1616 aaKnown RBP15.18■□□□□ 0.02
GREB1-206ENST00000396123 IQCEQ6IPM2 695 aa15.18■□□□□ 0.02
GREB1-206ENST00000396123 KLHL10Q6JEL2 608 aa15.18■□□□□ 0.02
GREB1-206ENST00000396123 NEMFO60524 1076 aa15.18■□□□□ 0.02
GREB1-206ENST00000396123 ERLIN2O94905 339 aa15.18■□□□□ 0.02
GREB1-206ENST00000396123 SKIDA1Q1XH10 827 aa15.18■□□□□ 0.02
GREB1-206ENST00000396123 MTHFSDQ2M296 383 aaKnown RBP15.18■□□□□ 0.02
GREB1-206ENST00000396123 LRSAM1Q6UWE0 723 aa15.18■□□□□ 0.02
GREB1-206ENST00000396123 CNNM3Q8NE01 707 aa15.18■□□□□ 0.02
GREB1-206ENST00000396123 ZNF165P49910 485 aa15.18■□□□□ 0.02
GREB1-206ENST00000396123 CEP85Q6P2H3 762 aa15.18■□□□□ 0.02
GREB1-206ENST00000396123 PHACTR3Q96KR7 559 aa15.18■□□□□ 0.02
GREB1-206ENST00000396123 ORC3Q9UBD5 711 aaPredicted RBP15.18■□□□□ 0.02
GREB1-206ENST00000396123 A0A1W2PP64 1363 aa15.18■□□□□ 0.02
GREB1-206ENST00000396123 ZFYVE9O95405 1425 aa15.18■□□□□ 0.02
GREB1-206ENST00000396123 CAVIN2O95810 425 aa15.17■□□□□ 0.02
GREB1-206ENST00000396123 ZSCAN16Q9H4T2 348 aaPredicted RBP15.17■□□□□ 0.02
GREB1-206ENST00000396123 NPC1L1Q9UHC9 1359 aa15.17■□□□□ 0.02
GREB1-206ENST00000396123 POLR3DP05423 398 aaPredicted RBP15.17■□□□□ 0.02
GREB1-206ENST00000396123 STX1AQ16623 288 aa15.17■□□□□ 0.02
GREB1-206ENST00000396123 IARSP41252 1262 aaKnown RBP15.17■□□□□ 0.02
GREB1-206ENST00000396123 KSR2Q6VAB6 950 aa15.17■□□□□ 0.02
GREB1-206ENST00000396123 KIAA1328Q86T90 577 aa15.17■□□□□ 0.02
GREB1-206ENST00000396123 NPATQ14207 1427 aa15.17■□□□□ 0.02
GREB1-206ENST00000396123 GRM8O00222 908 aa15.17■□□□□ 0.02
GREB1-206ENST00000396123 TMEM132AQ24JP5 1023 aa15.17■□□□□ 0.02
GREB1-206ENST00000396123 SEC63Q9UGP8 760 aaKnown RBP15.17■□□□□ 0.02
GREB1-206ENST00000396123 ZPR1O75312 459 aa15.16■□□□□ 0.02
GREB1-206ENST00000396123 AKAP4Q5JQC9 854 aa15.16■□□□□ 0.02
GREB1-206ENST00000396123 GOLGA6L10A6NI86 522 aa15.16■□□□□ 0.02
GREB1-206ENST00000396123 ABCC10Q5T3U5 1492 aa15.16■□□□□ 0.02
GREB1-206ENST00000396123 DZIP1Q86YF9 867 aaKnown RBP15.16■□□□□ 0.02
GREB1-206ENST00000396123 NCOA7Q8NI08 942 aa15.16■□□□□ 0.02
GREB1-206ENST00000396123 JARID2Q92833 1246 aaPredicted RBP15.16■□□□□ 0.02
GREB1-206ENST00000396123 FLT4P35916 1363 aa15.16■□□□□ 0.02
GREB1-206ENST00000396123 HAND2P61296 217 aa15.16■□□□□ 0.02
GREB1-206ENST00000396123 DDX46Q7L014 1031 aaKnown RBP15.16■□□□□ 0.02
GREB1-206ENST00000396123 XAGE3Q8WTP9 111 aa15.16■□□□□ 0.02
GREB1-206ENST00000396123 BRF1Q92994 677 aa15.16■□□□□ 0.02
GREB1-206ENST00000396123 PDCL3Q9H2J4 239 aa15.16■□□□□ 0.02
GREB1-206ENST00000396123 RBM8AQ9Y5S9 174 aaKnown RBP15.16■□□□□ 0.02
GREB1-206ENST00000396123 NECAB1Q8N987 351 aa15.16■□□□□ 0.02
GREB1-206ENST00000396123 ZNF397Q8NF99 534 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms