RNA–Protein interactions for RNA: ENST00000395397.7

NR1H3-201, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-201ENST00000395397 SSFA2P28290 1259 aa16.37■□□□□ 0.21
NR1H3-201ENST00000395397 IFNL2Q8IZJ0 200 aa16.37■□□□□ 0.21
NR1H3-201ENST00000395397 NGLY1Q96IV0 654 aa16.37■□□□□ 0.21
NR1H3-201ENST00000395397 SGSM2O43147 1006 aa16.36■□□□□ 0.21
NR1H3-201ENST00000395397 PLEKHG5O94827 1062 aa16.36■□□□□ 0.21
NR1H3-201ENST00000395397 XRCC6P12956 609 aaKnown RBP eCLIP16.36■□□□□ 0.21
NR1H3-201ENST00000395397 KLHL40Q2TBA0 621 aa16.36■□□□□ 0.21
NR1H3-201ENST00000395397 LMOD2Q6P5Q4 547 aa16.36■□□□□ 0.21
NR1H3-201ENST00000395397 LARP1Q6PKG0 1096 aaKnown RBP16.36■□□□□ 0.21
NR1H3-201ENST00000395397 UNC5CLQ8IV45 518 aa16.36■□□□□ 0.21
NR1H3-201ENST00000395397 CNTROBQ8N137 903 aa16.36■□□□□ 0.21
NR1H3-201ENST00000395397 RILPL2Q969X0 211 aa16.36■□□□□ 0.21
NR1H3-201ENST00000395397 DCAF5Q96JK2 942 aa16.36■□□□□ 0.21
NR1H3-201ENST00000395397 IL1RAPL2Q9NP60 686 aa16.36■□□□□ 0.21
NR1H3-201ENST00000395397 C9orf78Q9NZ63 289 aaPredicted RBP16.36■□□□□ 0.21
NR1H3-201ENST00000395397 KDM6AO15550 1401 aaPredicted RBP16.36■□□□□ 0.21
NR1H3-201ENST00000395397 RGPD5Q99666 1765 aa16.36■□□□□ 0.21
NR1H3-201ENST00000395397 GRM8O00222 908 aa16.35■□□□□ 0.21
NR1H3-201ENST00000395397 NEK4P51957 841 aa16.35■□□□□ 0.21
NR1H3-201ENST00000395397 CLASRPQ8N2M8 674 aaKnown RBP16.35■□□□□ 0.21
NR1H3-201ENST00000395397 TNS3Q68CZ2 1445 aa16.35■□□□□ 0.21
NR1H3-201ENST00000395397 SPATA31A3Q5VYP0 1347 aa16.35■□□□□ 0.21
NR1H3-201ENST00000395397 PROSER3Q2NL68 480 aa16.35■□□□□ 0.21
NR1H3-201ENST00000395397 ZC3H6P61129 1189 aaKnown RBP16.34■□□□□ 0.21
NR1H3-201ENST00000395397 TSHZ3Q63HK5 1081 aa16.34■□□□□ 0.21
NR1H3-201ENST00000395397 NUTM1Q86Y26 1132 aa16.34■□□□□ 0.21
NR1H3-201ENST00000395397 KCNB2Q92953 911 aa16.34■□□□□ 0.21
NR1H3-201ENST00000395397 TMX3Q96JJ7 454 aa16.34■□□□□ 0.21
NR1H3-201ENST00000395397 RAD50Q92878 1312 aa16.33■□□□□ 0.2
NR1H3-201ENST00000395397 ANXA1P04083 346 aa16.33■□□□□ 0.2
NR1H3-201ENST00000395397 LRP10Q7Z4F1 713 aa16.33■□□□□ 0.2
NR1H3-201ENST00000395397 FAM43AQ8N2R8 423 aa16.33■□□□□ 0.2
NR1H3-201ENST00000395397 RUFY2Q8WXA3 655 aa16.33■□□□□ 0.2
NR1H3-201ENST00000395397 KAZALD1Q96I82 304 aa16.33■□□□□ 0.2
NR1H3-201ENST00000395397 ANO2Q9NQ90 1003 aa16.33■□□□□ 0.2
NR1H3-201ENST00000395397 SNRKQ9NRH2 765 aa16.33■□□□□ 0.2
NR1H3-201ENST00000395397 ECHDC1Q9NTX5 307 aa16.33■□□□□ 0.2
NR1H3-201ENST00000395397 PKD1L3Q7Z443 1732 aa16.32■□□□□ 0.2
NR1H3-201ENST00000395397 SNRPA1P09661 255 aaKnown RBP16.32■□□□□ 0.2
NR1H3-201ENST00000395397 METTL22Q9BUU2 404 aaPredicted RBP16.32■□□□□ 0.2
NR1H3-201ENST00000395397 NLRP2Q9NX02 1062 aa16.32■□□□□ 0.2
NR1H3-201ENST00000395397 ZDHHC9Q9Y397 364 aa16.32■□□□□ 0.2
NR1H3-201ENST00000395397 ERBB4Q15303 1308 aa16.32■□□□□ 0.2
NR1H3-201ENST00000395397 GPATCH3Q96I76 525 aa16.31■□□□□ 0.2
NR1H3-201ENST00000395397 LSG1Q9H089 658 aaKnown RBP16.31■□□□□ 0.2
NR1H3-201ENST00000395397 FOXD4L1Q9NU39 408 aa16.31■□□□□ 0.2
NR1H3-201ENST00000395397 PALD1Q9ULE6 856 aa16.31■□□□□ 0.2
NR1H3-201ENST00000395397 PRAMEF22A3QJZ6 481 aa16.3■□□□□ 0.2
NR1H3-201ENST00000395397 IGKV5-2P06315 115 aa16.3■□□□□ 0.2
NR1H3-201ENST00000395397 NEXNQ0ZGT2 675 aa16.3■□□□□ 0.2
NR1H3-201ENST00000395397 NFATC2IPQ8NCF5 419 aa16.3■□□□□ 0.2
NR1H3-201ENST00000395397 EVI5LQ96CN4 794 aa16.3■□□□□ 0.2
NR1H3-201ENST00000395397 LMBRD1Q9NUN5 540 aa16.3■□□□□ 0.2
NR1H3-201ENST00000395397 MEGF6O75095 1541 aa16.3■□□□□ 0.2
NR1H3-201ENST00000395397 HIP1O00291 1037 aa16.29■□□□□ 0.2
NR1H3-201ENST00000395397 ADAMTS2O95450 1211 aa16.29■□□□□ 0.2
NR1H3-201ENST00000395397 BRD1O95696 1058 aa16.29■□□□□ 0.2
NR1H3-201ENST00000395397 ZGPATQ8N5A5 531 aaKnown RBP16.29■□□□□ 0.2
NR1H3-201ENST00000395397 TM6SF1Q9BZW5 370 aa16.29■□□□□ 0.2
NR1H3-201ENST00000395397 GRPEL1Q9HAV7 217 aa16.29■□□□□ 0.2
NR1H3-201ENST00000395397 NHSL1Q5SYE7 1610 aa16.29■□□□□ 0.2
NR1H3-201ENST00000395397 NEURL1BA8MQ27 555 aa16.29■□□□□ 0.2
NR1H3-201ENST00000395397 CYP27B1O15528 508 aa16.29■□□□□ 0.2
NR1H3-201ENST00000395397 GCKRQ14397 625 aa16.29■□□□□ 0.2
NR1H3-201ENST00000395397 CWF19L2Q2TBE0 894 aaKnown RBP16.29■□□□□ 0.2
NR1H3-201ENST00000395397 TICAM2Q86XR7 235 aa16.29■□□□□ 0.2
NR1H3-201ENST00000395397 SUCLG2Q96I99 432 aa16.29■□□□□ 0.2
NR1H3-201ENST00000395397 FMNL2Q96PY5 1086 aa16.29■□□□□ 0.2
NR1H3-201ENST00000395397 GZF1Q9H116 711 aaPredicted RBP16.29■□□□□ 0.2
NR1H3-201ENST00000395397 AK9Q5TCS8 1911 aa16.29■□□□□ 0.2
NR1H3-201ENST00000395397 SASH1O94885 1247 aa16.28■□□□□ 0.2
NR1H3-201ENST00000395397 ZNF445P59923 1031 aa16.28■□□□□ 0.2
NR1H3-201ENST00000395397 G3BP1Q13283 466 aaKnown RBP eCLIP16.28■□□□□ 0.2
NR1H3-201ENST00000395397 ANKRD13DQ6ZTN6 518 aa16.28■□□□□ 0.2
NR1H3-201ENST00000395397 RIC3Q7Z5B4 369 aa16.28■□□□□ 0.2
NR1H3-201ENST00000395397 CCDC125Q86Z20 511 aa16.28■□□□□ 0.2
NR1H3-201ENST00000395397 ZNF496Q96IT1 587 aaPredicted RBP16.28■□□□□ 0.2
NR1H3-201ENST00000395397 TTC14Q96N46 770 aa16.28■□□□□ 0.2
NR1H3-201ENST00000395397 IL25Q9H293 177 aa16.28■□□□□ 0.2
NR1H3-201ENST00000395397 COPRSQ9NQ92 184 aa16.28■□□□□ 0.2
NR1H3-201ENST00000395397 PARP4Q9UKK3 1724 aaKnown RBP16.28■□□□□ 0.2
NR1H3-201ENST00000395397 IFIT2P09913 472 aaKnown RBP16.27■□□□□ 0.2
NR1H3-201ENST00000395397 OS9Q13438 667 aaPredicted RBP16.27■□□□□ 0.2
NR1H3-201ENST00000395397 NKX1-1Q15270 411 aaPredicted RBP16.27■□□□□ 0.2
NR1H3-201ENST00000395397 RABL6Q3YEC7 729 aaPredicted RBP16.27■□□□□ 0.2
NR1H3-201ENST00000395397 KIAA1211Q6ZU35 1233 aa16.27■□□□□ 0.2
NR1H3-201ENST00000395397 DDX17Q92841 729 aaKnown RBP16.27■□□□□ 0.2
NR1H3-201ENST00000395397 USP21Q9UK80 565 aa16.27■□□□□ 0.2
NR1H3-201ENST00000395397 COPS6Q7L5N1 327 aa16.26■□□□□ 0.19
NR1H3-201ENST00000395397 KLHL34Q8N239 644 aa16.26■□□□□ 0.19
NR1H3-201ENST00000395397 BICC1Q9H694 974 aaKnown RBP16.26■□□□□ 0.19
NR1H3-201ENST00000395397 TRPC5Q9UL62 973 aaPredicted RBP16.26■□□□□ 0.19
NR1H3-201ENST00000395397 SNX14Q9Y5W7 946 aa16.26■□□□□ 0.19
NR1H3-201ENST00000395397 DDX49Q9Y6V7 483 aaKnown RBP16.26■□□□□ 0.19
NR1H3-201ENST00000395397 C5P01031 1676 aa16.25■□□□□ 0.19
NR1H3-201ENST00000395397 SLC39A6Q13433 755 aa16.25■□□□□ 0.19
NR1H3-201ENST00000395397 TTC5Q8N0Z6 440 aa16.25■□□□□ 0.19
NR1H3-201ENST00000395397 XAGE3Q8WTP9 111 aa16.25■□□□□ 0.19
NR1H3-201ENST00000395397 ERVV-2B6SEH9 535 aa16.24■□□□□ 0.19
NR1H3-201ENST00000395397 PDIA4P13667 645 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms