RNA–Protein interactions for RNA: ENST00000395358.7

RAPGEF3-202, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 4,092 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-202ENST00000395358 PAXBP1Q9Y5B6 917 aa13.43□□□□□ -0.26
RAPGEF3-202ENST00000395358 SMTNL1A8MU46 457 aa13.42□□□□□ -0.26
RAPGEF3-202ENST00000395358 IPO8O15397 1037 aaKnown RBP13.42□□□□□ -0.26
RAPGEF3-202ENST00000395358 GOLGA6L19H0YKK7 550 aa13.42□□□□□ -0.26
RAPGEF3-202ENST00000395358 SART3Q15020 963 aaKnown RBP13.42□□□□□ -0.26
RAPGEF3-202ENST00000395358 PTPN14Q15678 1187 aa13.42□□□□□ -0.26
RAPGEF3-202ENST00000395358 AMOTQ4VCS5 1084 aa13.42□□□□□ -0.26
RAPGEF3-202ENST00000395358 ARHGEF28Q8N1W1 1705 aaKnown RBP13.42□□□□□ -0.26
RAPGEF3-202ENST00000395358 DUSP27Q5VZP5 1158 aa13.42□□□□□ -0.26
RAPGEF3-202ENST00000395358 TTC5Q8N0Z6 440 aa13.42□□□□□ -0.26
RAPGEF3-202ENST00000395358 ELL2O00472 640 aaPredicted RBP13.41□□□□□ -0.26
RAPGEF3-202ENST00000395358 DHX16O60231 1041 aaKnown RBP13.41□□□□□ -0.26
RAPGEF3-202ENST00000395358 RABEP1Q15276 862 aa13.41□□□□□ -0.26
RAPGEF3-202ENST00000395358 TSPYL4Q9UJ04 414 aa13.41□□□□□ -0.26
RAPGEF3-202ENST00000395358 MCCP23508 829 aa13.41□□□□□ -0.26
RAPGEF3-202ENST00000395358 ATP6V1AP38606 617 aa13.41□□□□□ -0.26
RAPGEF3-202ENST00000395358 HSP90B2PQ58FF3 399 aa13.41□□□□□ -0.26
RAPGEF3-202ENST00000395358 RNF20Q5VTR2 975 aa13.41□□□□□ -0.26
RAPGEF3-202ENST00000395358 UBXN4Q92575 508 aa13.41□□□□□ -0.26
RAPGEF3-202ENST00000395358 SNX21Q969T3 373 aa13.41□□□□□ -0.26
RAPGEF3-202ENST00000395358 MPHOSPH10O00566 681 aaKnown RBP13.41□□□□□ -0.26
RAPGEF3-202ENST00000395358 SLFN14P0C7P3 912 aa13.41□□□□□ -0.26
RAPGEF3-202ENST00000395358 PPP2R5AQ15172 486 aa13.41□□□□□ -0.26
RAPGEF3-202ENST00000395358 DDX54Q8TDD1 881 aaKnown RBP13.41□□□□□ -0.26
RAPGEF3-202ENST00000395358 WDR63Q8IWG1 891 aa13.4□□□□□ -0.26
RAPGEF3-202ENST00000395358 SYTL4Q96C24 671 aaPredicted RBP13.4□□□□□ -0.26
RAPGEF3-202ENST00000395358 ZSCAN26Q16670 478 aa13.4□□□□□ -0.26
RAPGEF3-202ENST00000395358 BRMS1Q9HCU9 246 aa13.4□□□□□ -0.26
RAPGEF3-202ENST00000395358 CPSF1Q10570 1443 aaKnown RBP13.4□□□□□ -0.26
RAPGEF3-202ENST00000395358 AATKQ6ZMQ8 1374 aa13.4□□□□□ -0.26
RAPGEF3-202ENST00000395358 FKBP5Q13451 457 aaPredicted RBP13.4□□□□□ -0.26
RAPGEF3-202ENST00000395358 ZKSCAN2Q63HK3 967 aa13.4□□□□□ -0.26
RAPGEF3-202ENST00000395358 CERKQ8TCT0 537 aa13.4□□□□□ -0.26
RAPGEF3-202ENST00000395358 PDLIM2Q96JY6 352 aa13.4□□□□□ -0.26
RAPGEF3-202ENST00000395358 RBM42Q9BTD8 480 aaKnown RBP13.4□□□□□ -0.26
RAPGEF3-202ENST00000395358 DDX41Q9UJV9 622 aaKnown RBP13.4□□□□□ -0.26
RAPGEF3-202ENST00000395358 UVSSAQ2YD98 709 aa13.39□□□□□ -0.27
RAPGEF3-202ENST00000395358 CEP135Q66GS9 1140 aa13.39□□□□□ -0.27
RAPGEF3-202ENST00000395358 DCCP43146 1447 aa13.39□□□□□ -0.27
RAPGEF3-202ENST00000395358 SPATA31A3Q5VYP0 1347 aa13.39□□□□□ -0.27
RAPGEF3-202ENST00000395358 SYT10Q6XYQ8 523 aa13.39□□□□□ -0.27
RAPGEF3-202ENST00000395358 GNAT3A8MTJ3 354 aa13.39□□□□□ -0.27
RAPGEF3-202ENST00000395358 RPAINQ86UA6 219 aa13.39□□□□□ -0.27
RAPGEF3-202ENST00000395358 EYA1Q99502 592 aa13.39□□□□□ -0.27
RAPGEF3-202ENST00000395358 KCNG1Q9UIX4 513 aa13.39□□□□□ -0.27
RAPGEF3-202ENST00000395358 KIF18AQ8NI77 898 aa13.39□□□□□ -0.27
RAPGEF3-202ENST00000395358 GDPD2Q9HCC8 539 aa13.39□□□□□ -0.27
RAPGEF3-202ENST00000395358 RBM28Q9NW13 759 aaKnown RBP13.39□□□□□ -0.27
RAPGEF3-202ENST00000395358 MYO1CO00159 1063 aa13.38□□□□□ -0.27
RAPGEF3-202ENST00000395358 BECN2A8MW95 431 aa13.38□□□□□ -0.27
RAPGEF3-202ENST00000395358 IL13P35225 146 aa13.38□□□□□ -0.27
RAPGEF3-202ENST00000395358 DZIP1LQ8IYY4 767 aaKnown RBP13.38□□□□□ -0.27
RAPGEF3-202ENST00000395358 C8orf37Q96NL8 207 aa13.38□□□□□ -0.27
RAPGEF3-202ENST00000395358 CHRM1P11229 460 aaPredicted RBP13.37□□□□□ -0.27
RAPGEF3-202ENST00000395358 TRMT1Q9NXH9 659 aaKnown RBP13.37□□□□□ -0.27
RAPGEF3-202ENST00000395358 CTNNA3Q9UI47 895 aa13.37□□□□□ -0.27
RAPGEF3-202ENST00000395358 CAPN2P17655 700 aa13.37□□□□□ -0.27
RAPGEF3-202ENST00000395358 MICALL1Q8N3F8 863 aa13.37□□□□□ -0.27
RAPGEF3-202ENST00000395358 PHF23Q9BUL5 403 aaPredicted RBP13.37□□□□□ -0.27
RAPGEF3-202ENST00000395358 TMEM63CQ9P1W3 806 aa13.37□□□□□ -0.27
RAPGEF3-202ENST00000395358 SLFN5Q08AF3 891 aa13.37□□□□□ -0.27
RAPGEF3-202ENST00000395358 LMBRD1Q9NUN5 540 aa13.37□□□□□ -0.27
RAPGEF3-202ENST00000395358 BTG4Q9NY30 223 aa13.37□□□□□ -0.27
RAPGEF3-202ENST00000395358 ZNF142P52746 1687 aaPredicted RBP13.36□□□□□ -0.27
RAPGEF3-202ENST00000395358 FAM212AQ96EL1 285 aa13.36□□□□□ -0.27
RAPGEF3-202ENST00000395358 FIBPO43427 364 aa13.36□□□□□ -0.27
RAPGEF3-202ENST00000395358 NCBP1Q09161 790 aaKnown RBP13.36□□□□□ -0.27
RAPGEF3-202ENST00000395358 ELF2Q15723 593 aa13.36□□□□□ -0.27
RAPGEF3-202ENST00000395358 FILIP1Q7Z7B0 1213 aa13.36□□□□□ -0.27
RAPGEF3-202ENST00000395358 ARHGEF25Q86VW2 580 aa13.36□□□□□ -0.27
RAPGEF3-202ENST00000395358 GYS2P54840 703 aa13.36□□□□□ -0.27
RAPGEF3-202ENST00000395358 CDC42BPGQ6DT37 1551 aa13.36□□□□□ -0.27
RAPGEF3-202ENST00000395358 IVLP07476 585 aa13.35□□□□□ -0.27
RAPGEF3-202ENST00000395358 TPM1P09493 284 aa13.35□□□□□ -0.27
RAPGEF3-202ENST00000395358 PRR29P0C7W0 189 aa13.35□□□□□ -0.27
RAPGEF3-202ENST00000395358 ZNF853P0CG23 659 aa13.35□□□□□ -0.27
RAPGEF3-202ENST00000395358 CCDC186Q7Z3E2 898 aa13.35□□□□□ -0.27
RAPGEF3-202ENST00000395358 PCDHB15Q9Y5E8 787 aa13.35□□□□□ -0.27
RAPGEF3-202ENST00000395358 CABP4P57796 275 aa13.35□□□□□ -0.27
RAPGEF3-202ENST00000395358 TMED8Q6PL24 325 aaPredicted RBP13.35□□□□□ -0.27
RAPGEF3-202ENST00000395358 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.35□□□□□ -0.27
RAPGEF3-202ENST00000395358 ZNF330Q9Y3S2 320 aaPredicted RBP13.35□□□□□ -0.27
RAPGEF3-202ENST00000395358 EXOC5O00471 708 aa13.34□□□□□ -0.27
RAPGEF3-202ENST00000395358 TRIM66O15016 1216 aa13.34□□□□□ -0.27
RAPGEF3-202ENST00000395358 CDC45O75419 566 aa13.34□□□□□ -0.27
RAPGEF3-202ENST00000395358 CCDC192P0DO97 292 aa13.34□□□□□ -0.27
RAPGEF3-202ENST00000395358 ARID4AP29374 1257 aaPredicted RBP13.34□□□□□ -0.27
RAPGEF3-202ENST00000395358 SATB1Q01826 763 aa13.34□□□□□ -0.27
RAPGEF3-202ENST00000395358 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.34□□□□□ -0.27
RAPGEF3-202ENST00000395358 IBTKQ9P2D0 1353 aaPredicted RBP13.34□□□□□ -0.27
RAPGEF3-202ENST00000395358 PTGS1P23219 599 aa13.34□□□□□ -0.27
RAPGEF3-202ENST00000395358 ATP6V1DQ9Y5K8 247 aa13.34□□□□□ -0.27
RAPGEF3-202ENST00000395358 BIRC2Q13490 618 aa13.34□□□□□ -0.27
RAPGEF3-202ENST00000395358 MCM10Q7L590 875 aa13.34□□□□□ -0.27
RAPGEF3-202ENST00000395358 ACBD3Q9H3P7 528 aa13.34□□□□□ -0.27
RAPGEF3-202ENST00000395358 DDX19BQ9UMR2 479 aa13.34□□□□□ -0.27
RAPGEF3-202ENST00000395358 INSRP06213 1382 aa13.34□□□□□ -0.27
RAPGEF3-202ENST00000395358 EIF2S2P20042 333 aaKnown RBP13.34□□□□□ -0.27
RAPGEF3-202ENST00000395358 NAA30Q147X3 362 aaPredicted RBP13.34□□□□□ -0.27
RAPGEF3-202ENST00000395358 USP31Q70CQ4 1352 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms