RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 ARFGEF2Q9Y6D5 1785 aa25.6■■□□□ 1.69
COL11A2-204ENST00000395194 ZC3H4Q9UPT8 1303 aaKnown RBP25.6■■□□□ 1.69
COL11A2-204ENST00000395194 KDM3BQ7LBC6 1761 aa25.59■■□□□ 1.69
COL11A2-204ENST00000395194 NBPF26B4DH59 902 aa25.59■■□□□ 1.69
COL11A2-204ENST00000395194 NBPF10Q6P3W6 841 aaKnown RBP25.59■■□□□ 1.69
COL11A2-204ENST00000395194 NBPF15Q8N660 670 aa25.59■■□□□ 1.69
COL11A2-204ENST00000395194 HTATSF1O43719 755 aaKnown RBP25.58■■□□□ 1.69
COL11A2-204ENST00000395194 PDZRN3Q9UPQ7 1066 aa25.58■■□□□ 1.69
COL11A2-204ENST00000395194 GLTPD2A6NH11 291 aa25.57■■□□□ 1.68
COL11A2-204ENST00000395194 TAF7Q15545 349 aaPredicted RBP25.57■■□□□ 1.68
COL11A2-204ENST00000395194 NBPF5PQ86XG9 351 aaPredicted RBP25.57■■□□□ 1.68
COL11A2-204ENST00000395194 FAM177BA6PVY3 158 aa25.56■■□□□ 1.68
COL11A2-204ENST00000395194 NEFMP07197 916 aa25.56■■□□□ 1.68
COL11A2-204ENST00000395194 FSTL1Q12841 308 aa25.56■■□□□ 1.68
COL11A2-204ENST00000395194 DNAJC5GQ8N7S2 189 aa25.56■■□□□ 1.68
COL11A2-204ENST00000395194 ZNF652Q9Y2D9 606 aa25.55■■□□□ 1.68
COL11A2-204ENST00000395194 SRGNP10124 158 aa25.54■■□□□ 1.68
COL11A2-204ENST00000395194 PRPF40BQ6NWY9 871 aaKnown RBP25.54■■□□□ 1.68
COL11A2-204ENST00000395194 CNKSR1Q969H4 720 aa25.54■■□□□ 1.68
COL11A2-204ENST00000395194 THUMPD2Q9BTF0 503 aaKnown RBP25.54■■□□□ 1.68
COL11A2-204ENST00000395194 NIP7Q9Y221 180 aaKnown RBP eCLIP25.54■■□□□ 1.68
COL11A2-204ENST00000395194 ERFEQ4G0M1 354 aa25.53■■□□□ 1.68
COL11A2-204ENST00000395194 STYK1Q6J9G0 422 aa25.53■■□□□ 1.68
COL11A2-204ENST00000395194 CLEC4GQ6UXB4 293 aa25.53■■□□□ 1.68
COL11A2-204ENST00000395194 NGEFQ8N5V2 710 aa25.53■■□□□ 1.68
COL11A2-204ENST00000395194 SMC1BQ8NDV3 1235 aa25.53■■□□□ 1.68
COL11A2-204ENST00000395194 MASTLQ96GX5 879 aa25.53■■□□□ 1.68
COL11A2-204ENST00000395194 NUP98P52948 1817 aa25.52■■□□□ 1.68
COL11A2-204ENST00000395194 VEGFAP15692 232 aaPredicted RBP25.52■■□□□ 1.68
COL11A2-204ENST00000395194 IFFO2Q5TF58 517 aa25.52■■□□□ 1.68
COL11A2-204ENST00000395194 TAOK3Q9H2K8 898 aa25.52■■□□□ 1.68
COL11A2-204ENST00000395194 HLFQ16534 295 aa25.51■■□□□ 1.67
COL11A2-204ENST00000395194 PLEKHF1Q96S99 279 aa25.51■■□□□ 1.67
COL11A2-204ENST00000395194 NFE2L2Q16236 605 aa25.49■■□□□ 1.67
COL11A2-204ENST00000395194 MAPK8IP3Q9UPT6 1336 aa25.48■■□□□ 1.67
COL11A2-204ENST00000395194 DPY19L2Q6NUT2 758 aa25.48■■□□□ 1.67
COL11A2-204ENST00000395194 PCNTO95613 3336 aa25.47■■□□□ 1.67
COL11A2-204ENST00000395194 TPTE2Q6XPS3 522 aa25.47■■□□□ 1.67
COL11A2-204ENST00000395194 KLRG1Q96E93 195 aa25.47■■□□□ 1.67
COL11A2-204ENST00000395194 RRP7AQ9Y3A4 280 aaKnown RBP25.47■■□□□ 1.67
COL11A2-204ENST00000395194 LTBP3Q9NS15 1303 aa25.46■■□□□ 1.67
COL11A2-204ENST00000395194 POTECB2RU33 542 aa25.46■■□□□ 1.67
COL11A2-204ENST00000395194 EIF4A1P60842 406 aaKnown RBP25.46■■□□□ 1.67
COL11A2-204ENST00000395194 OLFM4Q6UX06 510 aa25.46■■□□□ 1.67
COL11A2-204ENST00000395194 PNISRQ8TF01 805 aaKnown RBP25.46■■□□□ 1.67
COL11A2-204ENST00000395194 NPR1P16066 1061 aa25.45■■□□□ 1.66
COL11A2-204ENST00000395194 MYL6BP14649 208 aa25.44■■□□□ 1.66
COL11A2-204ENST00000395194 GTF2E1P29083 439 aaPredicted RBP25.44■■□□□ 1.66
COL11A2-204ENST00000395194 SOGA3Q5TF21 947 aa25.44■■□□□ 1.66
COL11A2-204ENST00000395194 TTLL7Q6ZT98 887 aa25.44■■□□□ 1.66
COL11A2-204ENST00000395194 DDNO94850 711 aaPredicted RBP25.43■■□□□ 1.66
COL11A2-204ENST00000395194 CCDC93Q567U6 631 aa25.43■■□□□ 1.66
COL11A2-204ENST00000395194 ABCC12Q96J65 1359 aa25.43■■□□□ 1.66
COL11A2-204ENST00000395194 NUTM1Q86Y26 1132 aa25.42■■□□□ 1.66
COL11A2-204ENST00000395194 C7orf43Q8WVR3 580 aa25.42■■□□□ 1.66
COL11A2-204ENST00000395194 KLRG2A4D1S0 409 aaPredicted RBP25.41■■□□□ 1.66
COL11A2-204ENST00000395194 GPTP24298 496 aa25.41■■□□□ 1.66
COL11A2-204ENST00000395194 KIF6Q6ZMV9 814 aa25.41■■□□□ 1.66
COL11A2-204ENST00000395194 ZBTB3Q9H5J0 574 aa25.41■■□□□ 1.66
COL11A2-204ENST00000395194 MAP3K15Q6ZN16 1313 aa25.4■■□□□ 1.66
COL11A2-204ENST00000395194 RGL2O15211 777 aa25.4■■□□□ 1.66
COL11A2-204ENST00000395194 PNNQ9H307 717 aaKnown RBP25.4■■□□□ 1.66
COL11A2-204ENST00000395194 ZNF277Q9NRM2 450 aaPredicted RBP25.4■■□□□ 1.66
COL11A2-204ENST00000395194 TSPYL4Q9UJ04 414 aa25.39■■□□□ 1.66
COL11A2-204ENST00000395194 POTEIP0CG38 1075 aa25.38■■□□□ 1.65
COL11A2-204ENST00000395194 POTEJP0CG39 1038 aa25.38■■□□□ 1.65
COL11A2-204ENST00000395194 ERVV-1B6SEH8 477 aa25.37■■□□□ 1.65
COL11A2-204ENST00000395194 RIPK4P57078 832 aa25.37■■□□□ 1.65
COL11A2-204ENST00000395194 FKBP4Q02790 459 aaKnown RBP eCLIP25.37■■□□□ 1.65
COL11A2-204ENST00000395194 UBN2Q6ZU65 1347 aa25.37■■□□□ 1.65
COL11A2-204ENST00000395194 NYXQ9GZU5 481 aa25.36■■□□□ 1.65
COL11A2-204ENST00000395194 SCN4AP35499 1836 aa25.35■■□□□ 1.65
COL11A2-204ENST00000395194 EIF2S2P20042 333 aaKnown RBP25.35■■□□□ 1.65
COL11A2-204ENST00000395194 JMYQ8N9B5 988 aa25.35■■□□□ 1.65
COL11A2-204ENST00000395194 ZNF541Q9H0D2 1346 aa25.35■■□□□ 1.65
COL11A2-204ENST00000395194 ANXA1P04083 346 aa25.34■■□□□ 1.65
COL11A2-204ENST00000395194 ALDH1B1P30837 517 aa25.34■■□□□ 1.65
COL11A2-204ENST00000395194 RALBP1Q15311 655 aa25.34■■□□□ 1.65
COL11A2-204ENST00000395194 DDX10Q13206 875 aaKnown RBP25.33■■□□□ 1.65
COL11A2-204ENST00000395194 SUSD4Q5VX71 490 aa25.33■■□□□ 1.65
COL11A2-204ENST00000395194 CCDC146Q8IYE0 955 aa25.33■■□□□ 1.65
COL11A2-204ENST00000395194 SLC51AQ86UW1 340 aa25.32■■□□□ 1.64
COL11A2-204ENST00000395194 RTKN2Q8IZC4 609 aa25.32■■□□□ 1.64
COL11A2-204ENST00000395194 TMPOP42166 694 aaKnown RBP25.31■■□□□ 1.64
COL11A2-204ENST00000395194 NEUROD2Q15784 382 aa25.31■■□□□ 1.64
COL11A2-204ENST00000395194 PROSER3Q2NL68 480 aa25.31■■□□□ 1.64
COL11A2-204ENST00000395194 CRY2Q49AN0 593 aa25.31■■□□□ 1.64
COL11A2-204ENST00000395194 CHADLQ6NUI6 762 aa25.31■■□□□ 1.64
COL11A2-204ENST00000395194 SYNE4Q8N205 404 aa25.31■■□□□ 1.64
COL11A2-204ENST00000395194 NECTIN2Q92692 538 aa25.31■■□□□ 1.64
COL11A2-204ENST00000395194 RPGRQ92834 1020 aaKnown RBP25.31■■□□□ 1.64
COL11A2-204ENST00000395194 IARSP41252 1262 aaKnown RBP25.3■■□□□ 1.64
COL11A2-204ENST00000395194 ANKRD36CQ5JPF3 1778 aa25.3■■□□□ 1.64
COL11A2-204ENST00000395194 ERBB4Q15303 1308 aa25.3■■□□□ 1.64
COL11A2-204ENST00000395194 TCERG1O14776 1098 aaKnown RBP25.29■■□□□ 1.64
COL11A2-204ENST00000395194 NTSR2O95665 410 aa25.29■■□□□ 1.64
COL11A2-204ENST00000395194 GIGYF2Q6Y7W6 1299 aaKnown RBP25.29■■□□□ 1.64
COL11A2-204ENST00000395194 ZNF34Q8IZ26 560 aa25.29■■□□□ 1.64
COL11A2-204ENST00000395194 IBTKQ9P2D0 1353 aaPredicted RBP25.29■■□□□ 1.64
COL11A2-204ENST00000395194 SNED1Q8TER0 1413 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms