RNA–Protein interactions for RNA: ENST00000395098.5

VPS26A-203, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5 BASIC

Gene VPS26A, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-203ENST00000395098 CEP85Q6P2H3 762 aa16.49■□□□□ 0.23
VPS26A-203ENST00000395098 INTS5Q6P9B9 1019 aaKnown RBP16.49■□□□□ 0.23
VPS26A-203ENST00000395098 ZBTB3Q9H5J0 574 aa16.49■□□□□ 0.23
VPS26A-203ENST00000395098 ALDH1L1O75891 902 aa16.49■□□□□ 0.23
VPS26A-203ENST00000395098 GNAI3P08754 354 aa16.49■□□□□ 0.23
VPS26A-203ENST00000395098 CRKLP46109 303 aaKnown RBP16.49■□□□□ 0.23
VPS26A-203ENST00000395098 GNAI2P04899 355 aa16.48■□□□□ 0.23
VPS26A-203ENST00000395098 FAM196AQ6ZSG2 479 aa16.48■□□□□ 0.23
VPS26A-203ENST00000395098 ANKRD44Q8N8A2 993 aa16.48■□□□□ 0.23
VPS26A-203ENST00000395098 LRRFIP2Q9Y608 721 aaKnown RBP16.48■□□□□ 0.23
VPS26A-203ENST00000395098 NEURL1BA8MQ27 555 aa16.47■□□□□ 0.23
VPS26A-203ENST00000395098 LINC00116Q8NCU8 138 aa16.47■□□□□ 0.23
VPS26A-203ENST00000395098 BCL11BQ9C0K0 894 aaPredicted RBP16.47■□□□□ 0.23
VPS26A-203ENST00000395098 CCDC87Q9NVE4 849 aa16.47■□□□□ 0.23
VPS26A-203ENST00000395098 CICQ96RK0 1608 aaPredicted RBP16.47■□□□□ 0.23
VPS26A-203ENST00000395098 ARFGEF2Q9Y6D5 1785 aa16.47■□□□□ 0.23
VPS26A-203ENST00000395098 ATP5J2-PTCD1G3V325 749 aa16.47■□□□□ 0.23
VPS26A-203ENST00000395098 UBTFL1P0CB47 393 aaPredicted RBP16.47■□□□□ 0.23
VPS26A-203ENST00000395098 NEXNQ0ZGT2 675 aa16.46■□□□□ 0.23
VPS26A-203ENST00000395098 RPAP2Q8IXW5 612 aaPredicted RBP16.46■□□□□ 0.23
VPS26A-203ENST00000395098 NUP188Q5SRE5 1749 aa16.45■□□□□ 0.22
VPS26A-203ENST00000395098 TRIM37O94972 964 aa16.45■□□□□ 0.22
VPS26A-203ENST00000395098 IL6STP40189 918 aaPredicted RBP16.45■□□□□ 0.22
VPS26A-203ENST00000395098 SMC5Q8IY18 1101 aa16.45■□□□□ 0.22
VPS26A-203ENST00000395098 ARXQ96QS3 562 aa16.45■□□□□ 0.22
VPS26A-203ENST00000395098 EIF5P55010 431 aaKnown RBP16.45■□□□□ 0.22
VPS26A-203ENST00000395098 GCKRQ14397 625 aa16.45■□□□□ 0.22
VPS26A-203ENST00000395098 C9orf78Q9NZ63 289 aaPredicted RBP16.45■□□□□ 0.22
VPS26A-203ENST00000395098 MYH14Q7Z406 1995 aaKnown RBP16.44■□□□□ 0.22
VPS26A-203ENST00000395098 GRM8O00222 908 aa16.44■□□□□ 0.22
VPS26A-203ENST00000395098 PDZRN3Q9UPQ7 1066 aa16.44■□□□□ 0.22
VPS26A-203ENST00000395098 TBC1D2BQ9UPU7 963 aa16.44■□□□□ 0.22
VPS26A-203ENST00000395098 ZNF831Q5JPB2 1677 aa16.44■□□□□ 0.22
VPS26A-203ENST00000395098 COL5A3P25940 1745 aaPredicted RBP16.44■□□□□ 0.22
VPS26A-203ENST00000395098 PNMA6EA0A0J9YXQ4 647 aa16.43■□□□□ 0.22
VPS26A-203ENST00000395098 HLFQ16534 295 aa16.43■□□□□ 0.22
VPS26A-203ENST00000395098 KIF6Q6ZMV9 814 aa16.43■□□□□ 0.22
VPS26A-203ENST00000395098 JARID2Q92833 1246 aaPredicted RBP16.43■□□□□ 0.22
VPS26A-203ENST00000395098 CCNL1Q9UK58 526 aaPredicted RBP16.43■□□□□ 0.22
VPS26A-203ENST00000395098 UTYO14607 1347 aa16.43■□□□□ 0.22
VPS26A-203ENST00000395098 RREB1Q92766 1687 aa16.43■□□□□ 0.22
VPS26A-203ENST00000395098 MAP3K15Q6ZN16 1313 aa16.43■□□□□ 0.22
VPS26A-203ENST00000395098 KAZALD1Q96I82 304 aa16.42■□□□□ 0.22
VPS26A-203ENST00000395098 ATP8B2P98198 1209 aa16.42■□□□□ 0.22
VPS26A-203ENST00000395098 SMIM5Q71RC9 77 aa16.42■□□□□ 0.22
VPS26A-203ENST00000395098 DZIP3Q86Y13 1208 aaKnown RBP16.42■□□□□ 0.22
VPS26A-203ENST00000395098 PELP1Q8IZL8 1130 aaKnown RBP16.42■□□□□ 0.22
VPS26A-203ENST00000395098 SUCLG2Q96I99 432 aa16.41■□□□□ 0.22
VPS26A-203ENST00000395098 IBTKQ9P2D0 1353 aaPredicted RBP16.41■□□□□ 0.22
VPS26A-203ENST00000395098 TCIRG1Q13488 830 aa16.41■□□□□ 0.22
VPS26A-203ENST00000395098 DCTPP1Q9H773 170 aa16.41■□□□□ 0.22
VPS26A-203ENST00000395098 LRRC4BQ9NT99 713 aa16.41■□□□□ 0.22
VPS26A-203ENST00000395098 LY75O60449 1722 aa16.41■□□□□ 0.22
VPS26A-203ENST00000395098 RGS3P49796 1198 aa16.4■□□□□ 0.22
VPS26A-203ENST00000395098 GIGYF2Q6Y7W6 1299 aaKnown RBP16.4■□□□□ 0.22
VPS26A-203ENST00000395098 ISCA1Q9BUE6 129 aa16.4■□□□□ 0.22
VPS26A-203ENST00000395098 CNTNAP4Q9C0A0 1308 aa16.4■□□□□ 0.22
VPS26A-203ENST00000395098 A0A087WZG4 1122 aa16.39■□□□□ 0.22
VPS26A-203ENST00000395098 PPP1R42Q7Z4L9 355 aa16.39■□□□□ 0.22
VPS26A-203ENST00000395098 GCC1Q96CN9 775 aa16.39■□□□□ 0.22
VPS26A-203ENST00000395098 CASP7P55210 303 aa16.39■□□□□ 0.21
VPS26A-203ENST00000395098 NUCB1Q02818 461 aa16.39■□□□□ 0.21
VPS26A-203ENST00000395098 UBE3BQ7Z3V4 1068 aa16.39■□□□□ 0.21
VPS26A-203ENST00000395098 EPHA10Q5JZY3 1008 aa16.38■□□□□ 0.21
VPS26A-203ENST00000395098 NPM2Q86SE8 214 aaKnown RBP16.38■□□□□ 0.21
VPS26A-203ENST00000395098 AMIGO3Q86WK7 504 aa16.38■□□□□ 0.21
VPS26A-203ENST00000395098 CWC25Q9NXE8 425 aaPredicted RBP16.38■□□□□ 0.21
VPS26A-203ENST00000395098 AFDNP55196 1824 aaKnown RBP16.38■□□□□ 0.21
VPS26A-203ENST00000395098 COL15A1P39059 1388 aa16.38■□□□□ 0.21
VPS26A-203ENST00000395098 ERVV-1B6SEH8 477 aa16.38■□□□□ 0.21
VPS26A-203ENST00000395098 RTL5Q5HYW3 569 aaPredicted RBP16.38■□□□□ 0.21
VPS26A-203ENST00000395098 CCDC191Q8NCU4 936 aa16.38■□□□□ 0.21
VPS26A-203ENST00000395098 BICC1Q9H694 974 aaKnown RBP16.38■□□□□ 0.21
VPS26A-203ENST00000395098 H7C1W4 665 aa16.37■□□□□ 0.21
VPS26A-203ENST00000395098 HMMRO75330 724 aa16.37■□□□□ 0.21
VPS26A-203ENST00000395098 CAMTA2O94983 1202 aa16.37■□□□□ 0.21
VPS26A-203ENST00000395098 PDE4AP27815 886 aa16.37■□□□□ 0.21
VPS26A-203ENST00000395098 SSH3Q8TE77 659 aa16.37■□□□□ 0.21
VPS26A-203ENST00000395098 GPTP24298 496 aa16.37■□□□□ 0.21
VPS26A-203ENST00000395098 POLA2Q14181 598 aa16.37■□□□□ 0.21
VPS26A-203ENST00000395098 RC3H1Q5TC82 1133 aaKnown RBP16.37■□□□□ 0.21
VPS26A-203ENST00000395098 ANKRD45Q5TZF3 282 aa16.37■□□□□ 0.21
VPS26A-203ENST00000395098 SRGAP3O43295 1099 aa16.36■□□□□ 0.21
VPS26A-203ENST00000395098 TRIM28Q13263 835 aaKnown RBP16.36■□□□□ 0.21
VPS26A-203ENST00000395098 LNPKQ9C0E8 428 aa16.36■□□□□ 0.21
VPS26A-203ENST00000395098 MTX1Q13505 466 aa16.36■□□□□ 0.21
VPS26A-203ENST00000395098 CHD1LQ86WJ1 897 aa16.36■□□□□ 0.21
VPS26A-203ENST00000395098 PROM2Q8N271 834 aa16.36■□□□□ 0.21
VPS26A-203ENST00000395098 EXOC6BQ9Y2D4 811 aa16.36■□□□□ 0.21
VPS26A-203ENST00000395098 GNPATO15228 680 aa16.35■□□□□ 0.21
VPS26A-203ENST00000395098 APBB1O00213 710 aa16.35■□□□□ 0.21
VPS26A-203ENST00000395098 RPS6KA4O75676 772 aa16.35■□□□□ 0.21
VPS26A-203ENST00000395098 NLRP10Q86W26 655 aa16.35■□□□□ 0.21
VPS26A-203ENST00000395098 UBN2Q6ZU65 1347 aa16.35■□□□□ 0.21
VPS26A-203ENST00000395098 TAF1LQ8IZX4 1826 aa16.34■□□□□ 0.21
VPS26A-203ENST00000395098 ZNF34Q8IZ26 560 aa16.34■□□□□ 0.21
VPS26A-203ENST00000395098 HDAC5Q9UQL6 1122 aa16.34■□□□□ 0.21
VPS26A-203ENST00000395098 HSP90AB3PQ58FF7 597 aa16.33■□□□□ 0.21
VPS26A-203ENST00000395098 SYNE4Q8N205 404 aa16.33■□□□□ 0.21
VPS26A-203ENST00000395098 C4BP0C0L5 1744 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms